FFCP PHASE1:Hg19::chr5:14034644..14034647,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr5:14034644..14034647,- | |||
|coexpression_cluster_id=C510 | |coexpression_cluster_id=C510 | ||
|description=CAGE_peak_at_chr5:14034644..14034647,- | |description=CAGE_peak_at_chr5:14034644..14034647,- | ||
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|ontology_enrichment_celltype=CL:0000077!3.36e-26!19;CL:0000054!1.82e-11!2;CL:0000137!1.82e-11!2;CL:0000092!1.82e-11!2;CL:0000213!7.64e-09!57;CL:0000215!7.64e-09!57;CL:0000076!3.90e-08!62 | |ontology_enrichment_celltype=CL:0000077!3.36e-26!19;CL:0000054!1.82e-11!2;CL:0000137!1.82e-11!2;CL:0000092!1.82e-11!2;CL:0000213!7.64e-09!57;CL:0000215!7.64e-09!57;CL:0000076!3.90e-08!62 | ||
|ontology_enrichment_celltype_v019=CL:0000054;2.74e-50;2!CL:0000137;2.74e-50;2!CL:0000092;2.74e-50;2!CL:0002092;2.73e-11;10 | |ontology_enrichment_celltype_v019=CL:0000054;2.74e-50;2!CL:0000137;2.74e-50;2!CL:0000092;2.74e-50;2!CL:0002092;2.73e-11;10 | ||
|ontology_enrichment_celltype_v019_2=CL:0000054,2.74e-50,2;CL:0000137,2.74e-50,2;CL:0000092,2.74e-50,2;CL:0002092,2.73e-11,10;CL:0000062,2.16e-10,11;CL:0000375,2.16e-10,11;CL:0000335,2.16e-10,11 | |||
|ontology_enrichment_development_v019=CL:0000335;2.16e-10;11 | |ontology_enrichment_development_v019=CL:0000335;2.16e-10;11 | ||
|ontology_enrichment_disease=DOID:0060085!1.53e-21!1;DOID:3165!1.53e-21!1;DOID:0060121!1.53e-21!1;DOID:2438!1.53e-21!1;DOID:4418!1.53e-21!1;DOID:2355!9.43e-21!1;DOID:200!1.82e-11!2;DOID:4305!1.82e-11!2;DOID:74!4.52e-11!2;DOID:162!6.25e-08!235;DOID:14566!9.40e-08!239 | |ontology_enrichment_disease=DOID:0060085!1.53e-21!1;DOID:3165!1.53e-21!1;DOID:0060121!1.53e-21!1;DOID:2438!1.53e-21!1;DOID:4418!1.53e-21!1;DOID:2355!9.43e-21!1;DOID:200!1.82e-11!2;DOID:4305!1.82e-11!2;DOID:74!4.52e-11!2;DOID:162!6.25e-08!235;DOID:14566!9.40e-08!239 | ||
|ontology_enrichment_disease_v019=DOID:0060085;9.37e-99;1!DOID:3165;9.37e-99;1!DOID:0060121;9.37e-99;1!DOID:2438;9.37e-99;1!DOID:4418;9.37e-99;1!DOID:200;2.74e-50;2!DOID:4305;2.74e-50;2!DOID:0060072;5.56e-26;4!DOID:201;7.67e-18;6!DOID:0060100;7.67e-18;6 | |ontology_enrichment_disease_v019=DOID:0060085;9.37e-99;1!DOID:3165;9.37e-99;1!DOID:0060121;9.37e-99;1!DOID:2438;9.37e-99;1!DOID:4418;9.37e-99;1!DOID:200;2.74e-50;2!DOID:4305;2.74e-50;2!DOID:0060072;5.56e-26;4!DOID:201;7.67e-18;6!DOID:0060100;7.67e-18;6 | ||
|ontology_enrichment_disease_v019_2=DOID:0060085,9.37e-99,1;DOID:3165,9.37e-99,1;DOID:0060121,9.37e-99,1;DOID:2438,9.37e-99,1;DOID:4418,9.37e-99,1;DOID:200,2.74e-50,2;DOID:4305,2.74e-50,2;DOID:0060072,5.56e-26,4;DOID:201,7.67e-18,6;DOID:0060100,7.67e-18,6 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0000014;5.56e-26;4!UBERON:0002371;1.22e-09;12!UBERON:0001474;7.18e-07;18 | |ontology_enrichment_uberon_v019=UBERON:0000014;5.56e-26;4!UBERON:0002371;1.22e-09;12!UBERON:0001474;7.18e-07;18 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000014,5.56e-26,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,13.9100228192093,0,0,0,0,0,0,0,0,0,0,0,0,0.627617077873999,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0846733320657845,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113312091520126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.260994291965212,0,0,12.2368352253234,0.179088841081487,0,0,0,0.192914038270915,0,0,0,0.303859956177382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.20170506870352,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,13.9100228192093,0,0,0,0,0,0,0,0,0,0,0,0,0.627617077873999,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0846733320657845,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113312091520126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.260994291965212,0,0,12.2368352253234,0.179088841081487,0,0,0,0.192914038270915,0,0,0,0.303859956177382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.20170506870352,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr5:14034644..14034647,- | |short_description=p@chr5:14034644..14034647,- | ||
}} | }} |
Latest revision as of 10:35, 30 July 2015
Short description: | p@chr5:14034644..14034647, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr5:14034644..14034647, - |
Coexpression cluster: | C510_fibrous_mesothelioma_cholangiocellular_liposarcoma_Fibroblast_mesenchymal_leukemia |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone matrix secreting cell | 2.74e-50 | 2 |
osteocyte | 2.74e-50 | 2 |
osteoclast | 2.74e-50 | 2 |
bone marrow cell | 2.73e-11 | 10 |
osteoblast | 2.16e-10 | 11 |
osteoprogenitor cell | 2.16e-10 | 11 |
mesenchyme condensation cell | 2.16e-10 | 11 |
Ontology term | p-value | n |
---|---|---|
zone of skin | 5.56e-26 | 4 |
Ontology term | p-value | n |
---|---|---|
organ system benign neoplasm | 9.37e-99 | 1 |
skin benign neoplasm | 9.37e-99 | 1 |
integumentary system benign neoplasm | 9.37e-99 | 1 |
dermis tumor | 9.37e-99 | 1 |
cutaneous fibrous histiocytoma | 9.37e-99 | 1 |
giant cell tumor | 2.74e-50 | 2 |
bone giant cell tumor | 2.74e-50 | 2 |
benign neoplasm | 5.56e-26 | 4 |
connective tissue cancer | 7.67e-18 | 6 |
musculoskeletal system cancer | 7.67e-18 | 6 |