FFCP PHASE1:Hg19::chr2:2577842..2577844,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr2:2577842..2577844,+ | |||
|description=CAGE_peak_at_chr2:2577842..2577844,+ | |description=CAGE_peak_at_chr2:2577842..2577844,+ | ||
|id=chr2:2577842..2577844,+ | |id=chr2:2577842..2577844,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:1000449;1.05e-07;15!CL:1000507;1.28e-07;10!CL:1000494;1.28e-07;10!CL:0000239;3.81e-07;3!CL:1000615;3.81e-07;3!CL:0002615;3.81e-07;3!CL:0000346;3.81e-07;3!CL:1000428;3.81e-07;3!CL:0002306;3.81e-07;3!CL:1000497;9.15e-07;17!CL:0002518;9.15e-07;17 | |ontology_enrichment_celltype_v019=CL:1000449;1.05e-07;15!CL:1000507;1.28e-07;10!CL:1000494;1.28e-07;10!CL:0000239;3.81e-07;3!CL:1000615;3.81e-07;3!CL:0002615;3.81e-07;3!CL:0000346;3.81e-07;3!CL:1000428;3.81e-07;3!CL:0002306;3.81e-07;3!CL:1000497;9.15e-07;17!CL:0002518;9.15e-07;17 | ||
|ontology_enrichment_celltype_v019_2=CL:1000449,7.06e-08,15;CL:1000507,7.93e-08,10;CL:1000494,7.93e-08,10;CL:0000239,2.11e-07,3;CL:1000615,2.11e-07,3;CL:0002306,2.11e-07,3;CL:0000346,3.72e-07,3;CL:1000428,3.72e-07,3;CL:1000497,6.50e-07,17;CL:0002518,6.50e-07,17;CL:0002615,6.88e-07,3 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0002067;1.85e-08;9!UBERON:0006555;1.05e-07;15!UBERON:0004819;1.05e-07;15!UBERON:0001285;1.05e-07;15!UBERON:0007684;1.05e-07;15!UBERON:0004211;1.28e-07;10!UBERON:0009773;1.28e-07;10!UBERON:0001231;1.28e-07;10!UBERON:0004810;1.28e-07;10!UBERON:0006853;3.81e-07;3!UBERON:0007685;3.81e-07;3!UBERON:0000412;3.81e-07;3!UBERON:0004134;3.81e-07;3!UBERON:0001992;3.81e-07;3 | |ontology_enrichment_uberon_v019=UBERON:0002067;1.85e-08;9!UBERON:0006555;1.05e-07;15!UBERON:0004819;1.05e-07;15!UBERON:0001285;1.05e-07;15!UBERON:0007684;1.05e-07;15!UBERON:0004211;1.28e-07;10!UBERON:0009773;1.28e-07;10!UBERON:0001231;1.28e-07;10!UBERON:0004810;1.28e-07;10!UBERON:0006853;3.81e-07;3!UBERON:0007685;3.81e-07;3!UBERON:0000412;3.81e-07;3!UBERON:0004134;3.81e-07;3!UBERON:0001992;3.81e-07;3 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002067,1.62e-08,9;UBERON:0004016,1.62e-08,9;UBERON:0010083,1.62e-08,9;UBERON:0004211,7.06e-08,15;UBERON:0009773,7.06e-08,15;UBERON:0001231,7.06e-08,15;UBERON:0001285,7.06e-08,15;UBERON:0007684,7.06e-08,15;UBERON:0004208,7.06e-08,15;UBERON:0004810,7.93e-08,10;UBERON:0006853,2.11e-07,3;UBERON:0007685,2.11e-07,3;UBERON:0004134,2.11e-07,3;UBERON:0006555,2.30e-07,16;UBERON:0004819,2.30e-07,16;UBERON:0000412,3.72e-07,3;UBERON:0001992,3.72e-07,3 | |||
|phase1_expression=0,0.214100523890983,0,1.0007329835313,1.34088328328186,0,0,0.631719873426831,0.783556884599516,0,3.48900583986214,0.218441372130172,0.527533956456907,0.247532705920093,0.662794751455832,0,0.602694528023977,0,0.487932798790507,0.492484232307152,0.612002073732759,0.626909442956176,0.286235987131057,0,0.125542639594803,0.229240217243854,0,0.236132343941038,0,0,0.309632246632152,0,1.204823675113,0.369754010166788,0.309868802321207,0.426507697462265,0,0,0.401088894940283,0.217010870715852,0,0,0.515151135268373,0,0,0.242584061187816,0,0,0,0,0.256160706529101,0,0,0,0,0,0,0.449446968890169,0,0,0,0,0.199463657621632,0.426224750532694,0,0,0,0,0,0,0,0,0,0,0,0,0.112328631146495,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.382273228125229,0,0,0,0.393419540227666,0,0,0,0,0,0,0.111410456885174,0.589211814949674,0,0.270803863765016,0.25618263945135,0.390178042679635,0,0,0.289803085735052,0.296573126324121,0,1.04535523804977,0.113309342697566,0,0,0.253019692019503,0,0,0,0,0,0,0,0,0,0.534880391567015,0.868946423296794,0,0,0.12786256184353,0.722878304769133,0,0.869079113764942,0,0,0.283604451492204,0,0.527008714158756,0.0654895377488563,0,0.370784442784429,0.324547393654683,0,0.398873881556595,0,0,0,0.596287222100115,0,0.694281003215189,0,0.419499436209906,0.275118041940067,0.208994966536811,0.258416759169329,0,0,0.402829317109147,0,0.488124115096339,0,0,0.17859945656816,0,0.112611480483322,1.53316637465883,0,0.549605231791222,0,0,0.436094052142534,0,0.25326102332916,1.58891016975863,0.860509862246441,0,0.560677600142307,0,0,0,0.269421344139376,0.163461903113459,0.454072282934794,0,0,1.5608003841516,0,1.49448680551801,0.352303495931295,0.647491777472526,0.561803226808994,0.204154171254893,0,0.413303124703062,0,0.247266929278557,0,0,0.168336113954066,0.250237039743928,0,0,0,0.300476117813194,0.340296549480063,0.89694817844431,0,0.211931901159562,1.80054657650641,0.206105058476878,1.28820270022815,0.18611685633159,0.168776332241266,0.0974370051611986,1.51460264546469,0,0,0.355009592516614,0,0.169560592310488,0.193260853163297,0.272746120590835,0,0.121973706129595,0,0.116193942869518,0.10366105501537,0.504641701751257,0,1.56449532329816,1.28648187638577,0,0,0,0.473227200159376,0.337169380156203,0.482022059766964,0.220587945464788,0,0.474541238222193,0,0,0.38474715694639,0.738155454624648,0,0.4115740113314,0,0,0,0.590789906681404,0.441463099414651,0.122988438543114,0,0.109750285408626,0,0.603173834469785,0,0,2.07986957055916,0,0.231860809950154,0,0,1.38895653772983,0.761016608938393,1.58040879591855,1.71697232418975,0,0.234004265139238,0.297262324577456,0,0,0.141775097242386,0.268675568108545,1.16253575405585,0.766765358330422,0,0,0,0.864719720501769,0.37872730027914,0,0,0,0,0.205654985406647,0.300343057843917,0.571652865261156,0,0,0,0,0,0,0,0,0.514414748524284,0,0,0,0.542621605391443,4.11620168390384,0,1.06617584622764,0,0,0,0.099972991182057,1.2162378064119,0,0,0.239624855491583,0,0,0.144781306667579,0.61642896765115,0.179060963239896,0.672510863961164,0.197030760201927,0,0.385029108839245,0,0,0,0.167516265334349,0,0,0,0,0.12269149171914,0,0,0.207970861530807,0,0.315404830067869,0.585707074963566,0,0,0,0,0.553107505625109,0.260650843404249,0.391602314925481,1.02943027143257,0,0,0.106727557803444,0,0,0,0,0.61384789315225,0.280660094433074,0.128139149255701,0,0.804269605718038,0,0,0.177561725313127,0.0821271560138091,0,0,0,0.200506470303285,0.0920809889358963,0.229628896329213,0,0.393373244878272,0.451199612907412,0.0770153371044148,1.56869953835371,1.46139224653261,0,0,0.680374821106063,0.431831832204279,0,0,0,0.254876273045038,1.66215201785745,1.56712328305525,0,0,0.512900250232778,0,0,0,0.183138929636687,0,0,0,0,0.096670718292122,0.308097234229289,0.15350367472613,0.413509717453592,0.107420244868274,0,0.511359764496605,0.0890320356467374,0.165284915360978,0.576570202095319,0.893288987462089,0.2023155617111,0,0.94443704049192,0,0.308033580176089,0,0,0.18532421910392,0,0,0,0,0,0,0.318203247925937,0,0.359744915166629,0,0.353437207037059,0.202182481573316,0,1.26377536871694,0.975267478179181,0,0,0.136499911407986,0.141405431953713,1.13008116620243,0,0,1.75380354101505,0.578775534266688,0,0.405820753925408,0.92947049429925,0.845086807596724,0.430234056612155,0.196498082026242,0.7133421029625,0,0.422215270595328,0.987884678879706,0,1.04980416073495,0.0962221127255121,0,2.17781969722645,0,0.86101074534246,0,2.66058092122005,0.459446800413919,0,0,0,0,0,0,0,0.79312517629427,0.854592569019785,0,0,0,0.28853842595289,0.213425530045242,0,0.199579371432817,0,0,0.324621940274555,0,0.456469358066384,0.47003968731907,2.50634477090067,0.169291777801603,0.1605880751037,0,0,1.03051603426729,0,0,0.333698283423817,0,0,0,0.811367035427949,0,0,0,0,0.606802608747567,0.111443384277478,0.284136146806413,0.47748896947538,0,0,0,0,0,0.824019371133798,0.211125408127993,0,0,0,0,0.369254416383208,0,0.0898683511473268,0,0.511572370226872,0.394573622547734,2.3948309234694,0,0,0.0927680981618513,1.99613798001194,0.520855522170466,0,0.724999575434793,0,0,0.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| ||
|short_description=p@chr2:2577842..2577844,+ | |short_description=p@chr2:2577842..2577844,+ | ||
}} | }} |
Latest revision as of 08:56, 29 July 2015
Short description: | p@chr2:2577842..2577844, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:2577842..2577844, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of nephron | 7.06e-08 | 15 |
kidney tubule cell | 7.93e-08 | 10 |
nephron tubule epithelial cell | 7.93e-08 | 10 |
brush border epithelial cell | 2.11e-07 | 3 |
kidney cortex tubule cell | 2.11e-07 | 3 |
epithelial cell of proximal tubule | 2.11e-07 | 3 |
hair follicle dermal papilla cell | 3.72e-07 | 3 |
stem cell of epidermis | 3.72e-07 | 3 |
kidney cell | 6.50e-07 | 17 |
kidney epithelial cell | 6.50e-07 | 17 |
adipocyte of omentum tissue | 6.88e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
dermis | 1.62e-08 | 9 |
dermatome | 1.62e-08 | 9 |
future dermis | 1.62e-08 | 9 |
nephron epithelium | 7.06e-08 | 15 |
renal tubule | 7.06e-08 | 15 |
nephron tubule | 7.06e-08 | 15 |
nephron | 7.06e-08 | 15 |
uriniferous tubule | 7.06e-08 | 15 |
nephrogenic mesenchyme | 7.06e-08 | 15 |
nephron tubule epithelium | 7.93e-08 | 10 |
renal cortex tubule | 2.11e-07 | 3 |
region of nephron tubule | 2.11e-07 | 3 |
proximal tubule | 2.11e-07 | 3 |
excretory tube | 2.30e-07 | 16 |
kidney epithelium | 2.30e-07 | 16 |
dermal papilla | 3.72e-07 | 3 |
papillary layer of dermis | 3.72e-07 | 3 |