FFCP PHASE1:Hg19::chr20:6104108..6104110,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=55612 | |EntrezGene=55612 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=15889 | |HGNC=15889 | ||
|TSSclassifier=strong | |||
|UniProt=Q9BQL6,F8W9F0,Q49AC8,Q54A15 | |UniProt=Q9BQL6,F8W9F0,Q49AC8,Q54A15 | ||
|association_with_transcript=80bp_to_ENST00000217289,ENST00000339538,NM_017671,uc002wmr.2,uc002wms.2,uc010gbt.2_5end | |association_with_transcript=80bp_to_ENST00000217289,ENST00000339538,NM_017671,uc002wmr.2,uc002wms.2,uc010gbt.2_5end | ||
|cluster_id=chr20:6104108..6104110,- | |||
|description=CAGE_peak_21_at_FERMT1_5end | |description=CAGE_peak_21_at_FERMT1_5end | ||
|id=chr20:6104108..6104110,- | |id=chr20:6104108..6104110,- | ||
|ontology_enrichment_celltype=CL:0002076!2.43e-15!43;CL:0000066!4.89e-15!254;CL:0000223!1.25e-13!59;CL:0002368!1.32e-08!13;CL:0002231!7.72e-08!3;CL:0002251!1.68e-07!21 | |ontology_enrichment_celltype=CL:0002076!2.43e-15!43;CL:0000066!4.89e-15!254;CL:0000223!1.25e-13!59;CL:0002368!1.32e-08!13;CL:0002231!7.72e-08!3;CL:0002251!1.68e-07!21 | ||
|ontology_enrichment_celltype_v019=CL:1000507;3.81e-21;10!CL:1000494;3.81e-21;10!CL:1000449;1.22e-14;15!CL:1000497;4.22e-13;17!CL:0002518;4.22e-13;17 | |ontology_enrichment_celltype_v019=CL:1000507;3.81e-21;10!CL:1000494;3.81e-21;10!CL:1000449;1.22e-14;15!CL:1000497;4.22e-13;17!CL:0002518;4.22e-13;17 | ||
|ontology_enrichment_celltype_v019_2=CL:1000507,3.81e-21,10;CL:1000494,3.81e-21,10;CL:1000449,1.22e-14,15;CL:1000497,4.22e-13,17;CL:0002518,4.22e-13,17 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:305!1.08e-08!106;DOID:1749!4.96e-07!14 | |ontology_enrichment_disease=DOID:305!1.08e-08!106;DOID:1749!4.96e-07!14 | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004119!6.87e-09!169;UBERON:0000925!6.87e-09!169;UBERON:0006595!6.87e-09!169;UBERON:0003064!5.62e-08!37;UBERON:0005153!1.13e-07!37;UBERON:0000058!1.61e-07!26;UBERON:0001007!1.97e-07!155;UBERON:0001555!1.97e-07!155;UBERON:0007026!1.97e-07!155;UBERON:0006554!2.36e-07!44;UBERON:0000162!2.78e-07!14;UBERON:0001353!2.78e-07!14;UBERON:0000163!2.78e-07!14;UBERON:0006866!2.78e-07!14;UBERON:0000164!2.78e-07!14;UBERON:0000931!2.78e-07!14;UBERON:0001008!4.06e-07!45;UBERON:0002367!5.39e-07!11;UBERON:0010147!5.39e-07!11;UBERON:0009846!5.39e-07!11;UBERON:0003353!5.39e-07!11;UBERON:0004902!5.39e-07!11;UBERON:0003820!5.39e-07!11;UBERON:0009847!5.39e-07!11;UBERON:0005911!6.11e-07!82 | |ontology_enrichment_uberon=UBERON:0004119!6.87e-09!169;UBERON:0000925!6.87e-09!169;UBERON:0006595!6.87e-09!169;UBERON:0003064!5.62e-08!37;UBERON:0005153!1.13e-07!37;UBERON:0000058!1.61e-07!26;UBERON:0001007!1.97e-07!155;UBERON:0001555!1.97e-07!155;UBERON:0007026!1.97e-07!155;UBERON:0006554!2.36e-07!44;UBERON:0000162!2.78e-07!14;UBERON:0001353!2.78e-07!14;UBERON:0000163!2.78e-07!14;UBERON:0006866!2.78e-07!14;UBERON:0000164!2.78e-07!14;UBERON:0000931!2.78e-07!14;UBERON:0001008!4.06e-07!45;UBERON:0002367!5.39e-07!11;UBERON:0010147!5.39e-07!11;UBERON:0009846!5.39e-07!11;UBERON:0003353!5.39e-07!11;UBERON:0004902!5.39e-07!11;UBERON:0003820!5.39e-07!11;UBERON:0009847!5.39e-07!11;UBERON:0005911!6.11e-07!82 | ||
|ontology_enrichment_uberon_v019=UBERON:0004211;3.81e-21;10!UBERON:0009773;3.81e-21;10!UBERON:0001231;3.81e-21;10!UBERON:0004810;3.81e-21;10!UBERON:0006555;1.22e-14;15!UBERON:0004819;1.22e-14;15!UBERON:0001285;1.22e-14;15!UBERON:0007684;1.22e-14;15!UBERON:0002113;1.01e-09;24!UBERON:0011143;1.01e-09;24!UBERON:0000489;2.67e-08;29!UBERON:0006554;4.53e-08;30!UBERON:0001008;4.53e-08;30 | |ontology_enrichment_uberon_v019=UBERON:0004211;3.81e-21;10!UBERON:0009773;3.81e-21;10!UBERON:0001231;3.81e-21;10!UBERON:0004810;3.81e-21;10!UBERON:0006555;1.22e-14;15!UBERON:0004819;1.22e-14;15!UBERON:0001285;1.22e-14;15!UBERON:0007684;1.22e-14;15!UBERON:0002113;1.01e-09;24!UBERON:0011143;1.01e-09;24!UBERON:0000489;2.67e-08;29!UBERON:0006554;4.53e-08;30!UBERON:0001008;4.53e-08;30 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0004810,3.81e-21,10;UBERON:0004211,1.22e-14,15;UBERON:0009773,1.22e-14,15;UBERON:0001231,1.22e-14,15;UBERON:0001285,1.22e-14,15;UBERON:0007684,1.22e-14,15;UBERON:0004208,1.22e-14,15;UBERON:0006555,8.02e-14,16;UBERON:0004819,8.02e-14,16;UBERON:0002113,4.34e-09,26;UBERON:0003918,4.34e-09,26;UBERON:0011143,4.34e-09,26;UBERON:0005095,4.34e-09,26;UBERON:0007687,4.34e-09,26;UBERON:0000489,7.41e-08,31 | |||
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|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,0,0.697801167972428,0,0,0,0,0,0,0,0,0,0,0,0,0.136874425072884,0,0.0764134057479513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.57978255948989,0,0.286804595389004,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.38474715694639,0,0,0,0,0,0,0,0,0.122988438543114,0,0.329250856225877,0,0.301586917234893,0.185176890317059,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.503946384596579,0.283550194484773,0.985143749731331,0.871901815541886,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0.601519410909855,0.276242966807689,0,0,0,0.451199612907412,0,0,1.46139224653261,0.105551628892876,0,0,0,0,0,0.501689773854853,0,0,0.223874754722178,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0852266274161009,0,0.661139661443912,0.192190067365106,0.510450849978337,0,0,0,0,0.308033580176089,0,0.869932992075073,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136499911407986,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0,0,0,0,0,0.384888450902048,0.670302275535787,0,0.0941438007767792,0,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.284136146806413,0.23874448473769,0,0,0,0,0,0,0.63337622438398,0,0.276283915531148,0.251932747854276,0,0,0,0.269605053441981,0,0,0,0,0,0,0,0,0,0,0,0.227586896570999,0.254253650292766,0,0,0,0,0,0,0,0,0,0,0,0.139423744278603,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.158936578980379,0,0,0,0,0,0.0884575645033392,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0979923974143777,0.0870592065804026,0,0.171986032471617,0,0,0.164230914106418,0,0,0,0.137041924646751,0,0,0,0,0.213452994739353,0,0.288180834308212,0,0,0.288109595976299,0,0,0,0,0,0,0,0,0,0,0,0,0.229160424011684,0,0,0,0,0,0,0,0.157566364614447,0,0.0674035438541849,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.191915197319445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157054096250234,0,0,0,0,0,0.0620964029413835,0,0,0,0,0.235265819698172,0,0,0.149254802886874,0,0,0,0,0,0,0,0,0.147855149989634,0.159296767163702,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308801447160972,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.622077260032973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.366857197043358,0,0,0,0,0,0,0,0.261906694481422,0,0.443568258651136,0.0675375846183947,0,0,0.0634158101939068,0,0,0,0,0.127762427639595,0,0,0,0,0,0,0,0.0679697329768317,0.0657727735628491,0,0.333694205676207,0.078493092850514,0,0,0,0,0,0,0,0.23248285073625,0,0,0.207216164163037,0,0,0,0,0.0852134047591577,0,0,0,0,0,0.294450700845729,0.853425474875886,0,0,0,0,0,0,0,0.11294608203896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0802413666891683,0,0,0,0,0,0,0,0,0,0,0,0.109265571963696,0,0.101988829741982,0,0,0,0,0,0,0,0.213233981900981,0,0,0,0,0,0,0,0,0,0.215166616178029,0,0.407016343054873,0,0,0,0,0,0,0,0,0 | ||
|short_description=p21@FERMT1 | |short_description=p21@FERMT1 | ||
}} | }} |
Latest revision as of 10:44, 17 September 2015
Short description: | p21@FERMT1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_21_at_FERMT1_5end |
Coexpression cluster: | NA |
Association with transcript: | 80bp_to_ENST00000217289, ENST00000339538, NM_017671, uc002wmr.2, uc002wms.2, uc010gbt.2_5end |
EntrezGene: | FERMT1 |
HGNC: | 15889 |
UniProt: | Q9BQL6F8W9F0Q49AC8Q54A15 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
kidney tubule cell | 3.81e-21 | 10 |
nephron tubule epithelial cell | 3.81e-21 | 10 |
epithelial cell of nephron | 1.22e-14 | 15 |
kidney cell | 4.22e-13 | 17 |
kidney epithelial cell | 4.22e-13 | 17 |
Ontology term | p-value | n |
---|---|---|
nephron tubule epithelium | 3.81e-21 | 10 |
nephron epithelium | 1.22e-14 | 15 |
renal tubule | 1.22e-14 | 15 |
nephron tubule | 1.22e-14 | 15 |
nephron | 1.22e-14 | 15 |
uriniferous tubule | 1.22e-14 | 15 |
nephrogenic mesenchyme | 1.22e-14 | 15 |
excretory tube | 8.02e-14 | 16 |
kidney epithelium | 8.02e-14 | 16 |
kidney | 4.34e-09 | 26 |
kidney mesenchyme | 4.34e-09 | 26 |
upper urinary tract | 4.34e-09 | 26 |
kidney rudiment | 4.34e-09 | 26 |
kidney field | 4.34e-09 | 26 |
cavitated compound organ | 7.41e-08 | 31 |