FFCP PHASE1:Hg19::chr2:182322938..182322962,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3676 | |EntrezGene=3676 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6140 | |HGNC=6140 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-5bp_to_ENST00000478440_5end | |association_with_transcript=-5bp_to_ENST00000478440_5end | ||
|cluster_id=chr2:182322938..182322962,+ | |||
|coexpression_cluster_id=C1481 | |coexpression_cluster_id=C1481 | ||
|description=CAGE_peak_5_at_ITGA4_5end | |description=CAGE_peak_5_at_ITGA4_5end | ||
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|ontology_enrichment_celltype=CL:0000037!5.62e-68!172;CL:0000566!5.62e-68!172;CL:0000988!1.43e-64!182;CL:0002032!7.52e-63!165;CL:0000837!7.52e-63!165;CL:0000738!4.48e-52!140;CL:0002031!6.15e-44!124;CL:0002087!5.87e-43!119;CL:0000763!3.24e-31!112;CL:0000049!3.24e-31!112;CL:0000542!1.88e-29!53;CL:0000051!1.88e-29!53;CL:0000838!4.92e-29!52;CL:0002320!4.17e-22!365;CL:0000134!5.70e-22!358;CL:0000766!2.27e-17!76;CL:0000219!3.58e-17!390;CL:0002057!2.73e-16!42;CL:0000557!9.19e-16!71;CL:0000839!1.36e-15!70;CL:0000084!3.18e-15!25;CL:0000827!3.18e-15!25;CL:0000791!9.06e-15!18;CL:0000789!9.06e-15!18;CL:0002420!9.06e-15!18;CL:0002419!9.06e-15!18;CL:0000790!9.06e-15!18;CL:0000860!3.29e-14!45;CL:0002009!1.17e-13!65;CL:0000048!1.85e-13!430;CL:0000034!2.18e-13!444;CL:0002194!3.25e-13!63;CL:0000576!3.25e-13!63;CL:0000040!3.25e-13!63;CL:0000559!3.25e-13!63;CL:0000723!4.66e-13!436;CL:0000945!1.15e-12!24;CL:0000826!1.15e-12!24;CL:0000625!5.76e-11!11;CL:0000236!1.72e-10!14;CL:0002393!9.21e-08!9;CL:0002397!9.21e-08!9 | |ontology_enrichment_celltype=CL:0000037!5.62e-68!172;CL:0000566!5.62e-68!172;CL:0000988!1.43e-64!182;CL:0002032!7.52e-63!165;CL:0000837!7.52e-63!165;CL:0000738!4.48e-52!140;CL:0002031!6.15e-44!124;CL:0002087!5.87e-43!119;CL:0000763!3.24e-31!112;CL:0000049!3.24e-31!112;CL:0000542!1.88e-29!53;CL:0000051!1.88e-29!53;CL:0000838!4.92e-29!52;CL:0002320!4.17e-22!365;CL:0000134!5.70e-22!358;CL:0000766!2.27e-17!76;CL:0000219!3.58e-17!390;CL:0002057!2.73e-16!42;CL:0000557!9.19e-16!71;CL:0000839!1.36e-15!70;CL:0000084!3.18e-15!25;CL:0000827!3.18e-15!25;CL:0000791!9.06e-15!18;CL:0000789!9.06e-15!18;CL:0002420!9.06e-15!18;CL:0002419!9.06e-15!18;CL:0000790!9.06e-15!18;CL:0000860!3.29e-14!45;CL:0002009!1.17e-13!65;CL:0000048!1.85e-13!430;CL:0000034!2.18e-13!444;CL:0002194!3.25e-13!63;CL:0000576!3.25e-13!63;CL:0000040!3.25e-13!63;CL:0000559!3.25e-13!63;CL:0000723!4.66e-13!436;CL:0000945!1.15e-12!24;CL:0000826!1.15e-12!24;CL:0000625!5.76e-11!11;CL:0000236!1.72e-10!14;CL:0002393!9.21e-08!9;CL:0002397!9.21e-08!9 | ||
|ontology_enrichment_celltype_v019=CL:0000084;2.56e-23;25!CL:0000542;1.72e-22;53!CL:0000791;6.47e-22;18!CL:0000789;6.47e-22;18!CL:0002419;6.47e-22;18!CL:0000625;5.14e-16;11!CL:0000945;1.24e-13;24!CL:0002087;2.05e-13;104!CL:0000236;1.51e-12;13!CL:0000988;1.83e-11;177!CL:0000738;1.88e-10;136!CL:0000763;4.20e-09;100!CL:0000576;1.13e-07;48!CL:0002393;2.11e-07;6!CL:0002397;2.11e-07;6!CL:0000624;3.99e-07;6 | |ontology_enrichment_celltype_v019=CL:0000084;2.56e-23;25!CL:0000542;1.72e-22;53!CL:0000791;6.47e-22;18!CL:0000789;6.47e-22;18!CL:0002419;6.47e-22;18!CL:0000625;5.14e-16;11!CL:0000945;1.24e-13;24!CL:0002087;2.05e-13;104!CL:0000236;1.51e-12;13!CL:0000988;1.83e-11;177!CL:0000738;1.88e-10;136!CL:0000763;4.20e-09;100!CL:0000576;1.13e-07;48!CL:0002393;2.11e-07;6!CL:0002397;2.11e-07;6!CL:0000624;3.99e-07;6 | ||
|ontology_enrichment_celltype_v019_2=CL:0000037,3.36e-74,168;CL:0000988,7.15e-70,177;CL:0002032,4.06e-67,161;CL:0000837,4.06e-67,161;CL:0000738,4.17e-53,136;CL:0002087,5.28e-46,115;CL:0002031,8.29e-44,120;CL:0000542,1.10e-39,53;CL:0000051,1.10e-39,53;CL:0000838,4.92e-39,52;CL:0000763,1.05e-27,108;CL:0000049,1.05e-27,108;CL:0000084,2.30e-23,25;CL:0000827,2.30e-23,25;CL:0000134,1.10e-22,354;CL:0000791,6.70e-22,18;CL:0000789,6.70e-22,18;CL:0002420,6.70e-22,18;CL:0002419,6.70e-22,18;CL:0000790,6.70e-22,18;CL:0002320,1.47e-21,361;CL:0000219,1.24e-17,386;CL:0000625,4.89e-16,11;CL:0000945,1.03e-13,24;CL:0000826,1.03e-13,24;CL:0000034,1.20e-13,441;CL:0000236,1.53e-13,14;CL:0000048,2.07e-13,427;CL:0000860,2.09e-13,42;CL:0002057,2.09e-13,42;CL:0000766,6.86e-13,72;CL:0000723,9.05e-13,433;CL:0000473,1.24e-11,48;CL:0000234,1.24e-11,48;CL:0000839,3.51e-11,66;CL:0002393,4.12e-11,9;CL:0002397,4.12e-11,9;CL:0000557,3.15e-10,67;CL:0002194,2.68e-09,59;CL:0000576,2.68e-09,59;CL:0000040,2.68e-09,59;CL:0000559,2.68e-09,59;CL:0002009,9.70e-09,61;CL:0000624,3.67e-07,6 | |||
|ontology_enrichment_development_v019=CL:0000051;1.72e-22;53!CL:0000790;6.47e-22;18!CL:0002057;7.67e-10;42!CL:0000049;4.51e-09;108 | |ontology_enrichment_development_v019=CL:0000051;1.72e-22;53!CL:0000790;6.47e-22;18!CL:0002057;7.67e-10;42!CL:0000049;4.51e-09;108 | ||
|ontology_enrichment_disease=DOID:2531!3.38e-14!51;DOID:0060083!3.38e-14!51;DOID:1240!1.54e-12!39;DOID:8692!7.37e-11!31 | |ontology_enrichment_disease=DOID:2531!3.38e-14!51;DOID:0060083!3.38e-14!51;DOID:1240!1.54e-12!39;DOID:8692!7.37e-11!31 | ||
|ontology_enrichment_disease_v019=DOID:8692;3.09e-12;31!DOID:1240;7.04e-12;39!DOID:2531;4.09e-10;51!DOID:0060083;4.09e-10;51 | |ontology_enrichment_disease_v019=DOID:8692;3.09e-12;31!DOID:1240;7.04e-12;39!DOID:2531;4.09e-10;51!DOID:0060083;4.09e-10;51 | ||
|ontology_enrichment_disease_v019_2=DOID:1240,7.90e-16,39;DOID:2531,1.98e-15,51;DOID:0060083,1.98e-15,51;DOID:8692,1.09e-12,31 | |||
|ontology_enrichment_uberon=UBERON:0002390!1.11e-24!102;UBERON:0003061!1.11e-24!102;UBERON:0002384!1.72e-21!375;UBERON:0002193!1.92e-21!112;UBERON:0002371!5.25e-14!80;UBERON:0001474!6.12e-14!86;UBERON:0002405!8.46e-10!115;UBERON:0004765!8.85e-10!101;UBERON:0001434!8.85e-10!101;UBERON:0000178!5.53e-09!15;UBERON:0000179!5.53e-09!15;UBERON:0000463!5.53e-09!15 | |ontology_enrichment_uberon=UBERON:0002390!1.11e-24!102;UBERON:0003061!1.11e-24!102;UBERON:0002384!1.72e-21!375;UBERON:0002193!1.92e-21!112;UBERON:0002371!5.25e-14!80;UBERON:0001474!6.12e-14!86;UBERON:0002405!8.46e-10!115;UBERON:0004765!8.85e-10!101;UBERON:0001434!8.85e-10!101;UBERON:0000178!5.53e-09!15;UBERON:0000179!5.53e-09!15;UBERON:0000463!5.53e-09!15 | ||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.72e-12;15!UBERON:0000179;1.72e-12;15!UBERON:0000463;1.72e-12;15!UBERON:0002390;1.50e-10;32 | |ontology_enrichment_uberon_v019=UBERON:0000178;1.72e-12;15!UBERON:0000179;1.72e-12;15!UBERON:0000463;1.72e-12;15!UBERON:0002390;1.50e-10;32 | ||
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| ||
|short_description=p5@ITGA4 | |short_description=p5@ITGA4 | ||
}} | }} |
Latest revision as of 21:12, 18 September 2015
Short description: | p5@ITGA4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_ITGA4_5end |
Coexpression cluster: | C1481_CD4_CD8_thymus_CD14CD16_CD14_granulocyte_CD19 |
Association with transcript: | -5bp_to_ENST00000478440_5end |
EntrezGene: | ITGA4 |
HGNC: | 6140 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 3.17e-21 | 98 |
blood island | 3.17e-21 | 98 |
connective tissue | 4.98e-20 | 371 |
hemolymphoid system | 1.48e-18 | 108 |
blood | 2.24e-12 | 15 |
haemolymphatic fluid | 2.24e-12 | 15 |
organism substance | 2.24e-12 | 15 |
immune system | 8.07e-11 | 93 |
bone element | 7.28e-09 | 82 |
bone marrow | 9.68e-09 | 76 |
hemopoietic organ | 2.73e-08 | 7 |
immune organ | 2.73e-08 | 7 |
skeletal element | 2.87e-07 | 90 |
Ontology term | p-value | n |
---|---|---|
leukemia | 7.90e-16 | 39 |
hematologic cancer | 1.98e-15 | 51 |
immune system cancer | 1.98e-15 | 51 |
myeloid leukemia | 1.09e-12 | 31 |