FFCP PHASE1:Hg19::chr19:7600643..7600678,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10908 | |EntrezGene=10908 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16268 | |HGNC=16268 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_uc002mgs.2_5end | |association_with_transcript=0bp_to_uc002mgs.2_5end | ||
|cluster_id=chr19:7600643..7600678,+ | |||
|description=CAGE_peak_4_at_PNPLA6_5end | |description=CAGE_peak_4_at_PNPLA6_5end | ||
|id=chr19:7600643..7600678,+ | |id=chr19:7600643..7600678,+ | ||
|ontology_enrichment_celltype=CL:0000766!2.20e-17!76;CL:0002057!7.34e-17!42;CL:0002194!8.48e-16!63;CL:0000576!8.48e-16!63;CL:0000040!8.48e-16!63;CL:0000559!8.48e-16!63;CL:0002371!3.79e-15!591;CL:0000839!4.96e-15!70;CL:0002009!1.30e-14!65;CL:0000860!6.75e-14!45;CL:0000557!1.92e-13!71;CL:0000144!1.04e-12!625;CL:0000723!3.62e-09!436;CL:0000115!3.63e-09!35;CL:0000034!6.23e-09!444;CL:0000048!6.43e-09!430;CL:0000222!1.35e-07!119;CL:0002078!1.89e-07!44;CL:0000763!3.98e-07!112;CL:0000049!3.98e-07!112;CL:0000003!4.06e-07!722 | |ontology_enrichment_celltype=CL:0000766!2.20e-17!76;CL:0002057!7.34e-17!42;CL:0002194!8.48e-16!63;CL:0000576!8.48e-16!63;CL:0000040!8.48e-16!63;CL:0000559!8.48e-16!63;CL:0002371!3.79e-15!591;CL:0000839!4.96e-15!70;CL:0002009!1.30e-14!65;CL:0000860!6.75e-14!45;CL:0000557!1.92e-13!71;CL:0000144!1.04e-12!625;CL:0000723!3.62e-09!436;CL:0000115!3.63e-09!35;CL:0000034!6.23e-09!444;CL:0000048!6.43e-09!430;CL:0000222!1.35e-07!119;CL:0002078!1.89e-07!44;CL:0000763!3.98e-07!112;CL:0000049!3.98e-07!112;CL:0000003!4.06e-07!722 | ||
|ontology_enrichment_celltype_v019=CL:0000473;1.28e-12;39!CL:0000234;1.28e-12;39!CL:0000860;8.83e-11;33!CL:0002057;8.83e-11;33!CL:0000576;4.17e-10;48!CL:0000766;3.08e-09;69!CL:0000115;4.75e-08;36!CL:0002681;7.87e-07;12!CL:0002584;7.87e-07;12 | |ontology_enrichment_celltype_v019=CL:0000473;1.28e-12;39!CL:0000234;1.28e-12;39!CL:0000860;8.83e-11;33!CL:0002057;8.83e-11;33!CL:0000576;4.17e-10;48!CL:0000766;3.08e-09;69!CL:0000115;4.75e-08;36!CL:0002681;7.87e-07;12!CL:0002584;7.87e-07;12 | ||
|ontology_enrichment_celltype_v019_2=CL:0000473,3.83e-21,48;CL:0000234,3.83e-21,48;CL:0000766,8.98e-21,72;CL:0002194,2.42e-19,59;CL:0000576,2.42e-19,59;CL:0000040,2.42e-19,59;CL:0000559,2.42e-19,59;CL:0000839,3.37e-18,66;CL:0002009,1.13e-17,61;CL:0000860,1.57e-17,42;CL:0002057,1.57e-17,42;CL:0000557,3.97e-16,67;CL:0000115,8.69e-10,36;CL:0000723,3.19e-09,433;CL:0000048,4.65e-09,427;CL:0000034,5.05e-09,441;CL:0000763,8.32e-09,108;CL:0000049,8.32e-09,108;CL:0002078,4.32e-08,45;CL:0000222,4.81e-08,121;CL:0002087,5.86e-07,115;CL:0002681,9.20e-07,12;CL:0002584,9.20e-07,12;CL:0002393,9.63e-07,9;CL:0002397,9.63e-07,9 | |||
|ontology_enrichment_development_v019=CL:0002057;1.48e-12;42 | |ontology_enrichment_development_v019=CL:0002057;1.48e-12;42 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003081!5.77e-23!216;UBERON:0002193!9.89e-15!112;UBERON:0002390!3.28e-13!102;UBERON:0003061!3.28e-13!102;UBERON:0002204!3.70e-13!167;UBERON:0002371!4.30e-13!80;UBERON:0001474!3.18e-10!86;UBERON:0002405!6.02e-10!115;UBERON:0004765!9.95e-10!101;UBERON:0001434!9.95e-10!101;UBERON:0000055!1.08e-09!69;UBERON:0002049!1.32e-09!79;UBERON:0007798!1.32e-09!79;UBERON:0004535!6.32e-09!110;UBERON:0001981!1.07e-08!60;UBERON:0007500!1.07e-08!60;UBERON:0004537!1.07e-08!60;UBERON:0006965!1.07e-08!60;UBERON:0001009!3.37e-08!113;UBERON:0001637!2.83e-07!42;UBERON:0003509!2.83e-07!42;UBERON:0004572!2.83e-07!42 | |ontology_enrichment_uberon=UBERON:0003081!5.77e-23!216;UBERON:0002193!9.89e-15!112;UBERON:0002390!3.28e-13!102;UBERON:0003061!3.28e-13!102;UBERON:0002204!3.70e-13!167;UBERON:0002371!4.30e-13!80;UBERON:0001474!3.18e-10!86;UBERON:0002405!6.02e-10!115;UBERON:0004765!9.95e-10!101;UBERON:0001434!9.95e-10!101;UBERON:0000055!1.08e-09!69;UBERON:0002049!1.32e-09!79;UBERON:0007798!1.32e-09!79;UBERON:0004535!6.32e-09!110;UBERON:0001981!1.07e-08!60;UBERON:0007500!1.07e-08!60;UBERON:0004537!1.07e-08!60;UBERON:0006965!1.07e-08!60;UBERON:0001009!3.37e-08!113;UBERON:0001637!2.83e-07!42;UBERON:0003509!2.83e-07!42;UBERON:0004572!2.83e-07!42 | ||
|ontology_enrichment_uberon_v019=UBERON:0003914;3.11e-07;74!UBERON:0000055;4.48e-07;65!UBERON:0001225;7.87e-07;12!UBERON:0008987;7.87e-07;12!UBERON:0000353;8.41e-07;15 | |ontology_enrichment_uberon_v019=UBERON:0003914;3.11e-07;74!UBERON:0000055;4.48e-07;65!UBERON:0001225;7.87e-07;12!UBERON:0008987;7.87e-07;12!UBERON:0000353;8.41e-07;15 | ||
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| ||
|short_description=p4@PNPLA6 | |short_description=p4@PNPLA6 | ||
}} | }} |
Latest revision as of 20:53, 24 September 2015
Short description: | p4@PNPLA6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_PNPLA6_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_uc002mgs.2_5end |
EntrezGene: | PNPLA6 |
HGNC: | 16268 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 3.83e-21 | 48 |
phagocyte | 3.83e-21 | 48 |
myeloid leukocyte | 8.98e-21 | 72 |
monopoietic cell | 2.42e-19 | 59 |
monocyte | 2.42e-19 | 59 |
monoblast | 2.42e-19 | 59 |
promonocyte | 2.42e-19 | 59 |
myeloid lineage restricted progenitor cell | 3.37e-18 | 66 |
macrophage dendritic cell progenitor | 1.13e-17 | 61 |
classical monocyte | 1.57e-17 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.57e-17 | 42 |
granulocyte monocyte progenitor cell | 3.97e-16 | 67 |
endothelial cell | 8.69e-10 | 36 |
somatic stem cell | 3.19e-09 | 433 |
multi fate stem cell | 4.65e-09 | 427 |
stem cell | 5.05e-09 | 441 |
myeloid cell | 8.32e-09 | 108 |
common myeloid progenitor | 8.32e-09 | 108 |
meso-epithelial cell | 4.32e-08 | 45 |
mesodermal cell | 4.81e-08 | 121 |
nongranular leukocyte | 5.86e-07 | 115 |
kidney cortical cell | 9.20e-07 | 12 |
renal cortical epithelial cell | 9.20e-07 | 12 |
intermediate monocyte | 9.63e-07 | 9 |
CD14-positive, CD16-positive monocyte | 9.63e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
lateral plate mesoderm | 1.76e-23 | 203 |
hemolymphoid system | 3.10e-17 | 108 |
immune system | 2.11e-16 | 93 |
mesoderm | 5.62e-16 | 315 |
mesoderm-derived structure | 5.62e-16 | 315 |
presumptive mesoderm | 5.62e-16 | 315 |
hematopoietic system | 8.02e-16 | 98 |
blood island | 8.02e-16 | 98 |
bone marrow | 9.74e-16 | 76 |
musculoskeletal system | 2.13e-14 | 167 |
skeletal element | 2.22e-13 | 90 |
bone element | 1.65e-12 | 82 |
skeletal system | 1.83e-11 | 100 |
vessel | 6.15e-10 | 68 |
vasculature | 8.02e-10 | 78 |
vascular system | 8.02e-10 | 78 |
cardiovascular system | 2.77e-09 | 109 |
epithelial tube open at both ends | 5.85e-09 | 59 |
blood vessel | 5.85e-09 | 59 |
blood vasculature | 5.85e-09 | 59 |
vascular cord | 5.85e-09 | 59 |
circulatory system | 1.67e-08 | 112 |
artery | 3.22e-07 | 42 |
arterial blood vessel | 3.22e-07 | 42 |
arterial system | 3.22e-07 | 42 |
splanchnic layer of lateral plate mesoderm | 3.62e-07 | 83 |
parenchyma | 8.41e-07 | 15 |
cortex of kidney | 9.20e-07 | 12 |
renal parenchyma | 9.20e-07 | 12 |