FFCP PHASE1:Hg19::chr1:31211863..31211872,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr1:31211863..31211872,-
|short_description=p@chr1:31211863..31211872,-
|description=CAGE_peak_at_chr1:31211863..31211872,-
|association_with_transcript=NA
|E...") |
No edit summary |
||
(10 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr1:31211863..31211872,- | |||
|coexpression_cluster_id=C329 | |||
|description=CAGE_peak_at_chr1:31211863..31211872,- | |||
|id=chr1:31211863..31211872,- | |||
|ontology_enrichment_celltype=CL:0000037!2.76e-85!172;CL:0000566!2.76e-85!172;CL:0002032!1.18e-84!165;CL:0000837!1.18e-84!165;CL:0000988!1.59e-78!182;CL:0000738!6.57e-78!140;CL:0002031!4.93e-69!124;CL:0002087!4.88e-67!119;CL:0000763!3.70e-66!112;CL:0000049!3.70e-66!112;CL:0000766!7.79e-63!76;CL:0000557!3.50e-54!71;CL:0000839!4.21e-53!70;CL:0002194!2.06e-49!63;CL:0000576!2.06e-49!63;CL:0000040!2.06e-49!63;CL:0000559!2.06e-49!63;CL:0002009!2.08e-49!65;CL:0002057!2.60e-49!42;CL:0000860!6.13e-45!45;CL:0000134!5.65e-22!358;CL:0002320!6.82e-21!365;CL:0000219!4.04e-17!390;CL:0000838!3.94e-16!52;CL:0000542!1.23e-15!53;CL:0000051!1.23e-15!53;CL:0000048!1.24e-13!430;CL:0000723!5.35e-13!436;CL:0000034!3.47e-12!444;CL:0000945!1.90e-10!24;CL:0000826!1.90e-10!24;CL:0000094!2.38e-08!8;CL:0002393!4.42e-08!9;CL:0002397!4.42e-08!9;CL:0002274!3.48e-07!5;CL:0000457!3.48e-07!5;CL:0002191!3.48e-07!5;CL:0000097!3.48e-07!5;CL:0000831!3.48e-07!5;CL:0002028!3.48e-07!5 | |||
|ontology_enrichment_celltype_v019=CL:0000860;2.31e-86;33!CL:0002057;2.31e-86;33!CL:0000473;1.16e-76;39!CL:0000234;1.16e-76;39!CL:0000576;3.33e-47;48!CL:0000766;8.87e-42;69!CL:0000763;2.29e-23;100!CL:0000738;2.86e-17;136!CL:0002087;1.19e-16;104!CL:0000775;8.40e-12;3!CL:0000094;4.03e-11;8!CL:0000988;5.94e-10;177!CL:0000235;7.80e-10;6!CL:0000081;5.48e-08;11!CL:0000219;6.40e-07;193!CL:0000097;7.06e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,1.48e-92,72;CL:0000473,2.34e-92,48;CL:0000234,2.34e-92,48;CL:0000860,1.30e-83,42;CL:0002057,1.30e-83,42;CL:0000839,4.22e-79,66;CL:0000557,8.64e-78,67;CL:0002194,4.86e-76,59;CL:0000576,4.86e-76,59;CL:0000040,4.86e-76,59;CL:0000559,4.86e-76,59;CL:0002009,2.81e-73,61;CL:0000763,4.71e-64,108;CL:0000049,4.71e-64,108;CL:0000738,9.42e-64,136;CL:0002031,3.69e-56,120;CL:0002032,2.39e-54,161;CL:0000837,2.39e-54,161;CL:0000037,8.17e-54,168;CL:0002087,1.82e-53,115;CL:0000988,1.66e-50,177;CL:0000134,1.83e-19,354;CL:0002320,7.40e-19,361;CL:0000219,1.01e-16,386;CL:0000048,4.17e-14,427;CL:0000723,9.57e-14,433;CL:0000034,2.80e-13,441;CL:0000775,7.57e-12,3;CL:0000094,4.08e-11,8;CL:0000235,6.74e-10,6;CL:0000081,5.53e-08,11;CL:0000097,7.99e-07,5;CL:0002028,7.99e-07,5 | |||
|ontology_enrichment_development_v019=CL:0002057;3.25e-59;42!CL:0000049;1.02e-18;108 | |||
|ontology_enrichment_disease=DOID:2531!1.68e-08!51;DOID:0060083!1.68e-08!51;DOID:8692!1.59e-07!31;DOID:1240!2.19e-07!39 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!8.48e-46!102;UBERON:0003061!8.48e-46!102;UBERON:0002371!1.07e-45!80;UBERON:0002193!7.10e-45!112;UBERON:0001474!4.84e-41!86;UBERON:0002405!2.32e-35!115;UBERON:0004765!7.10e-32!101;UBERON:0001434!7.10e-32!101;UBERON:0002384!4.86e-20!375;UBERON:0003081!5.02e-13!216;UBERON:0002204!1.79e-12!167 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.62e-67,76;UBERON:0001474,6.62e-62,82;UBERON:0002390,8.80e-56,98;UBERON:0003061,8.80e-56,98;UBERON:0004765,1.42e-55,90;UBERON:0002405,1.77e-53,93;UBERON:0002193,1.04e-49,108;UBERON:0001434,4.50e-49,100;UBERON:0002204,1.72e-25,167;UBERON:0003081,9.68e-22,203;UBERON:0002384,4.97e-18,371;UBERON:0000926,1.88e-10,315;UBERON:0004120,1.88e-10,315;UBERON:0006603,1.88e-10,315 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.534893840235659,0.246301768349837,0.314843125254717,0.786728553697808,1.15148819429164,0.309632246632152,0,0,0,0.0774672005803016,0.142169232487422,0,0,1.80490002723128,0.434021741431704,0.223915474239924,1.29557466407592,0.257575567634187,3.34415949192999,1.51150377475524,2.42584061187816,5.57829688573643,3.70051099219643,2.16794459626573,5.17846306179871,2.0492856522328,1.6553756092201,2.06847408441971,1.93645405075148,2.70852973188684,6.96496656307637,4.63940455098338,2.69668181334102,5.81559395504715,3.53021929783703,5.75403413219137,4.61791820261403,1.99463657621632,3.83602275479425,3.48251086354301,3.97169657283798,1.86846674698672,4.52247597462138,3.65038042894141,2.17188844705117,1.21079900526674,1.47311054395026,1.26584954976354,1.05627643155971,0.212604299965044,0.838634582033504,0.673971786878971,1.50176892841506,0.16072558669708,0.570025487482497,0.99458338599545,0.547992461293902,1.75996244461323,0.546138611262131,0,0.426730222566507,0,0,0.661044872784862,0,1.1384259382189,2.93618594685469,2.29363936875137,0,0,0,0.196709770113833,2.75107533924415,0.205601498999509,1.00311897234407,0,0,0,0.779873198196215,0.294605907474837,0.221533894583621,0.270803863765016,1.5370958367081,0.910415432919148,0.493313713811028,0.829050053357545,0.289803085735052,0.444859689486181,0.267540828089713,0,0.113309342697566,0,0.68725489096526,0,0,0,0,0.301150238155546,0.383959833463255,0,0.236777252044017,0,0.403213486449465,0.267440195783507,0.579297615531196,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.522389211897802,0.664789802594326,0.476981248610684,0,0,0,0,0,0,0,0,0.208994966536811,0,0,0,0,0,0.24406205754817,0,0.81014194788176,0,0,0,0,0,0,0,3.87780264148325,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144366447761074,0,0.190254152234598,0,0,0.492434012174795,0.702012795417713,1.78357394746474,0,0,0,0,0,0,0.492663237895943,0.704387472105808,2.07328115540772,2.59415916150531,2.14612136824846,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43247561282381,4.52031382288914,6.32501818449095,0,0,0,0,0,0,0.112085143993527,0.197030760201927,1.07813787429759,0.385029108839245,0,0,0,0,0,3.74503511973591,11.966458368161,2.48649308061621,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.82707210449155,1.50999940573032,0.640365346820666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0.569647187174163,0,0,0.648473311192717,0,1.58625035258854,0,0,0,0,0,0,0,0.399158742865633,0.383010740264733,0.635020748171649,0,0,0,0.626719583092093,0,0.338583555603207,0.1605880751037,0.201799707191048,0.425846237690326,0.343505344755765,0,0,0,0.586164286206121,0.278406173895242,0,0.540911356951966,0.33307196799782,1.4098700508785,0,0.293016358543788,0,0.111443384277478,0,0,0,0,0,0,0,0.16480387422676,0,0,0.552567831062295,0,0,0.369254416383208,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02193298195737,1.41282230755522,0.332423363800313,0,0,0,0,0.158936578980379,0,0,0,0,0,0.0884575645033392,0,0,0,0,0.067401132980677,0,0,0.91227394607833,0,0,0,0,0,0.568679216656392,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0.225980740780532,0,0,0.0633107959558787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0,0,0,0,0.199679000498991,0,0,0,0,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0,0.77380195455795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.328370082997356,0,0,0.146552233678082,0,0,0,0,0,0.320362237703084,0.314408610199332,0,0.496166021811951,0.395223263795889,0.121792598380896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194860308839388,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.691403925334676,0,0,0,0,0,0,0,0,0.913158720509496,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245148321753905,0,0.196308467114945,0,0,0,0.375935671919414,0,0.299823467774787,0,0,0,0,0,0.286679166302903,0,0.135982980381829,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0.829169439458779,0,0,0,0,0.124149428591716,0,0,0,0,0,0.202056159043763,0,0,0,0,0,0,0,0,0,0,0.805095174364105,0.641136984606466 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.534893840235659,0.246301768349837,0.314843125254717,0.786728553697808,1.15148819429164,0.309632246632152,0,0,0,0.0774672005803016,0.142169232487422,0,0,1.80490002723128,0.434021741431704,0.223915474239924,1.29557466407592,0.257575567634187,3.34415949192999,1.51150377475524,2.42584061187816,5.57829688573643,3.70051099219643,2.16794459626573,5.17846306179871,2.0492856522328,1.6553756092201,2.06847408441971,1.93645405075148,2.70852973188684,6.96496656307637,4.63940455098338,2.69668181334102,5.81559395504715,3.53021929783703,5.75403413219137,4.61791820261403,1.99463657621632,3.83602275479425,3.48251086354301,3.97169657283798,1.86846674698672,4.52247597462138,3.65038042894141,2.17188844705117,1.21079900526674,1.47311054395026,1.26584954976354,1.05627643155971,0.212604299965044,0.838634582033504,0.673971786878971,1.50176892841506,0.16072558669708,0.570025487482497,0.99458338599545,0.547992461293902,1.75996244461323,0.546138611262131,0,0.426730222566507,0,0,0.661044872784862,0,1.1384259382189,2.93618594685469,2.29363936875137,0,0,0,0.196709770113833,2.75107533924415,0.205601498999509,1.00311897234407,0,0,0,0.779873198196215,0.294605907474837,0.221533894583621,0.270803863765016,1.5370958367081,0.910415432919148,0.493313713811028,0.829050053357545,0.289803085735052,0.444859689486181,0.267540828089713,0,0.113309342697566,0,0.68725489096526,0,0,0,0,0.301150238155546,0.383959833463255,0,0.236777252044017,0,0.403213486449465,0.267440195783507,0.579297615531196,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.522389211897802,0.664789802594326,0.476981248610684,0,0,0,0,0,0,0,0,0.208994966536811,0,0,0,0,0,0.24406205754817,0,0.81014194788176,0,0,0,0,0,0,0,3.87780264148325,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144366447761074,0,0.190254152234598,0,0,0.492434012174795,0.702012795417713,1.78357394746474,0,0,0,0,0,0,0.492663237895943,0.704387472105808,2.07328115540772,2.59415916150531,2.14612136824846,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43247561282381,4.52031382288914,6.32501818449095,0,0,0,0,0,0,0.112085143993527,0.197030760201927,1.07813787429759,0.385029108839245,0,0,0,0,0,3.74503511973591,11.966458368161,2.48649308061621,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.82707210449155,1.50999940573032,0.640365346820666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0.569647187174163,0,0,0.648473311192717,0,1.58625035258854,0,0,0,0,0,0,0,0.399158742865633,0.383010740264733,0.635020748171649,0,0,0,0.626719583092093,0,0.338583555603207,0.1605880751037,0.201799707191048,0.425846237690326,0.343505344755765,0,0,0,0.586164286206121,0.278406173895242,0,0.540911356951966,0.33307196799782,1.4098700508785,0,0.293016358543788,0,0.111443384277478,0,0,0,0,0,0,0,0.16480387422676,0,0,0.552567831062295,0,0,0.369254416383208,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02193298195737,1.41282230755522,0.332423363800313,0,0,0,0,0.158936578980379,0,0,0,0,0,0.0884575645033392,0,0,0,0,0.067401132980677,0,0,0.91227394607833,0,0,0,0,0,0.568679216656392,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0.225980740780532,0,0,0.0633107959558787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0,0,0,0,0.199679000498991,0,0,0,0,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0,0.77380195455795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.328370082997356,0,0,0.146552233678082,0,0,0,0,0,0.320362237703084,0.314408610199332,0,0.496166021811951,0.395223263795889,0.121792598380896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194860308839388,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.691403925334676,0,0,0,0,0,0,0,0,0.913158720509496,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245148321753905,0,0.196308467114945,0,0,0,0.375935671919414,0,0.299823467774787,0,0,0,0,0,0.286679166302903,0,0.135982980381829,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0.829169439458779,0,0,0,0,0.124149428591716,0,0,0,0,0,0.202056159043763,0,0,0,0,0,0,0,0,0,0,0.805095174364105,0.641136984606466 | ||
|short_description=p@chr1:31211863..31211872,- | |||
}} | }} |
Latest revision as of 07:05, 28 July 2015
Short description: | p@chr1:31211863..31211872, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:31211863..31211872, - |
Coexpression cluster: | C329_Neutrophils_CD14_Monocytederived_Whole_Peripheral_CD14CD16_Eosinophils |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.62e-67 | 76 |
bone element | 6.62e-62 | 82 |
hematopoietic system | 8.80e-56 | 98 |
blood island | 8.80e-56 | 98 |
skeletal element | 1.42e-55 | 90 |
immune system | 1.77e-53 | 93 |
hemolymphoid system | 1.04e-49 | 108 |
skeletal system | 4.50e-49 | 100 |
musculoskeletal system | 1.72e-25 | 167 |
lateral plate mesoderm | 9.68e-22 | 203 |
connective tissue | 4.97e-18 | 371 |
mesoderm | 1.88e-10 | 315 |
mesoderm-derived structure | 1.88e-10 | 315 |
presumptive mesoderm | 1.88e-10 | 315 |