FFCP PHASE1:Hg19::chr22:42320192..42320195,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr22:42320192..42320195,- | |||
|coexpression_cluster_id=C1830 | |coexpression_cluster_id=C1830 | ||
|description=CAGE_peak_at_chr22:42320192..42320195,- | |description=CAGE_peak_at_chr22:42320192..42320195,- | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0000945!1.58e-28!24;CL:0000826!1.58e-28!24;CL:0000542!7.76e-25!53;CL:0000051!7.76e-25!53;CL:0000838!1.60e-23!52;CL:0000236!8.99e-17!14;CL:0002087!2.93e-09!119 | |ontology_enrichment_celltype=CL:0000945!1.58e-28!24;CL:0000826!1.58e-28!24;CL:0000542!7.76e-25!53;CL:0000051!7.76e-25!53;CL:0000838!1.60e-23!52;CL:0000236!8.99e-17!14;CL:0002087!2.93e-09!119 | ||
|ontology_enrichment_celltype_v019=CL:0000945;2.16e-80;24!CL:0000236;1.03e-43;13!CL:0000542;4.43e-25;53!CL:0002087;4.04e-08;104 | |ontology_enrichment_celltype_v019=CL:0000945;2.16e-80;24!CL:0000236;1.03e-43;13!CL:0000542;4.43e-25;53!CL:0002087;4.04e-08;104 | ||
|ontology_enrichment_celltype_v019_2=CL:0000945,2.39e-80,24;CL:0000826,2.39e-80,24;CL:0000542,1.70e-41,53;CL:0000051,1.70e-41,53;CL:0000236,1.50e-40,14;CL:0000838,2.68e-36,52;CL:0002087,4.99e-18,115;CL:0000738,5.51e-15,136;CL:0002031,1.17e-14,120;CL:0002032,2.20e-12,161;CL:0000837,2.20e-12,161;CL:0000037,8.58e-12,168;CL:0000988,4.23e-11,177 | |||
|ontology_enrichment_development_v019=CL:0000051;4.43e-25;53 | |ontology_enrichment_development_v019=CL:0000051;4.43e-25;53 | ||
|ontology_enrichment_disease=DOID:162!4.02e-12!235;DOID:14566!1.67e-11!239;DOID:0060058!4.47e-09!10;DOID:0050687!2.72e-07!143;DOID:1115!9.16e-07!20 | |ontology_enrichment_disease=DOID:162!4.02e-12!235;DOID:14566!1.67e-11!239;DOID:0060058!4.47e-09!10;DOID:0050687!2.72e-07!143;DOID:1115!9.16e-07!20 | ||
|ontology_enrichment_disease_v019=DOID:12603;2.05e-13;1!DOID:630;6.42e-13;1!DOID:0050177;6.42e-13;1!DOID:0050427;6.42e-13;1!DOID:2355;6.42e-13;1!DOID:0060058;4.09e-11;10!DOID:74;4.29e-07;2 | |ontology_enrichment_disease_v019=DOID:12603;2.05e-13;1!DOID:630;6.42e-13;1!DOID:0050177;6.42e-13;1!DOID:0050427;6.42e-13;1!DOID:2355;6.42e-13;1!DOID:0060058;4.09e-11;10!DOID:74;4.29e-07;2 | ||
|ontology_enrichment_disease_v019_2=DOID:12603,2.06e-13,1;DOID:630,4.23e-13,1;DOID:0050177,4.23e-13,1;DOID:0050427,4.23e-13,1;DOID:2355,9.73e-13,1;DOID:0060058,4.16e-11,10;DOID:74,5.28e-07,2 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0001876;4.29e-07;2 | |ontology_enrichment_uberon_v019=UBERON:0001876;4.29e-07;2 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001876,3.28e-07,2 | |||
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| ||
|short_description=p@chr22:42320192..42320195,- | |short_description=p@chr22:42320192..42320195,- | ||
}} | }} |
Latest revision as of 21:41, 28 July 2015
Short description: | p@chr22:42320192..42320195, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr22:42320192..42320195, - |
Coexpression cluster: | C1830_CD19_xeroderma_b_lymphoma_hereditary_B_plasma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 2.39e-80 | 24 |
pro-B cell | 2.39e-80 | 24 |
lymphocyte | 1.70e-41 | 53 |
common lymphoid progenitor | 1.70e-41 | 53 |
B cell | 1.50e-40 | 14 |
lymphoid lineage restricted progenitor cell | 2.68e-36 | 52 |
nongranular leukocyte | 4.99e-18 | 115 |
leukocyte | 5.51e-15 | 136 |
hematopoietic lineage restricted progenitor cell | 1.17e-14 | 120 |
hematopoietic oligopotent progenitor cell | 2.20e-12 | 161 |
hematopoietic multipotent progenitor cell | 2.20e-12 | 161 |
hematopoietic stem cell | 8.58e-12 | 168 |
hematopoietic cell | 4.23e-11 | 177 |
Ontology term | p-value | n |
---|---|---|
amygdala | 3.28e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
acute leukemia | 2.06e-13 | 1 |
genetic disease | 4.23e-13 | 1 |
monogenic disease | 4.23e-13 | 1 |
xeroderma pigmentosum | 4.23e-13 | 1 |
anemia | 9.73e-13 | 1 |
lymphoma | 4.16e-11 | 10 |
hematopoietic system disease | 5.28e-07 | 2 |