FFCP PHASE1:Hg19::chr5:42951063..42951074,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=100129186 | |EntrezGene=100129186 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-460bp_to_AK128204_5end | |association_with_transcript=-460bp_to_AK128204_5end | ||
|cluster_id=chr5:42951063..42951074,+ | |||
|coexpression_cluster_id=C0 | |coexpression_cluster_id=C0 | ||
|description=CAGE_peak_4_at_LOC100129186_5end | |description=CAGE_peak_4_at_LOC100129186_5end | ||
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|ontology_enrichment_celltype=CL:0002057!2.40e-24!42;CL:0000860!1.24e-21!45;CL:0000766!2.51e-17!76;CL:0002371!1.27e-15!591;CL:0000003!2.76e-15!722;CL:0000557!3.27e-15!71;CL:0000839!7.15e-15!70;CL:0002194!1.01e-14!63;CL:0000576!1.01e-14!63;CL:0000040!1.01e-14!63;CL:0000559!1.01e-14!63;CL:0000144!1.28e-14!625;CL:0002009!1.36e-14!65;CL:0000738!2.39e-14!140;CL:0000012!7.24e-14!682;CL:0002087!1.67e-13!119;CL:0002031!5.21e-13!124;CL:0000548!5.27e-13!679;CL:0000004!5.27e-13!679;CL:0000255!5.27e-13!679;CL:0000048!2.58e-10!430;CL:0000723!3.42e-10!436;CL:0000034!4.10e-10!444;CL:0000988!1.01e-09!182;CL:0002320!1.37e-09!365;CL:0000063!5.14e-09!578;CL:0000037!7.98e-09!172;CL:0000566!7.98e-09!172;CL:0000134!9.77e-09!358;CL:0002139!1.37e-08!24;CL:0002032!4.06e-08!165;CL:0000837!4.06e-08!165;CL:0000763!8.78e-08!112;CL:0000049!8.78e-08!112;CL:0000071!1.08e-07!18;CL:0002546!1.08e-07!18;CL:0000219!1.42e-07!390;CL:0000115!5.10e-07!35 | |ontology_enrichment_celltype=CL:0002057!2.40e-24!42;CL:0000860!1.24e-21!45;CL:0000766!2.51e-17!76;CL:0002371!1.27e-15!591;CL:0000003!2.76e-15!722;CL:0000557!3.27e-15!71;CL:0000839!7.15e-15!70;CL:0002194!1.01e-14!63;CL:0000576!1.01e-14!63;CL:0000040!1.01e-14!63;CL:0000559!1.01e-14!63;CL:0000144!1.28e-14!625;CL:0002009!1.36e-14!65;CL:0000738!2.39e-14!140;CL:0000012!7.24e-14!682;CL:0002087!1.67e-13!119;CL:0002031!5.21e-13!124;CL:0000548!5.27e-13!679;CL:0000004!5.27e-13!679;CL:0000255!5.27e-13!679;CL:0000048!2.58e-10!430;CL:0000723!3.42e-10!436;CL:0000034!4.10e-10!444;CL:0000988!1.01e-09!182;CL:0002320!1.37e-09!365;CL:0000063!5.14e-09!578;CL:0000037!7.98e-09!172;CL:0000566!7.98e-09!172;CL:0000134!9.77e-09!358;CL:0002139!1.37e-08!24;CL:0002032!4.06e-08!165;CL:0000837!4.06e-08!165;CL:0000763!8.78e-08!112;CL:0000049!8.78e-08!112;CL:0000071!1.08e-07!18;CL:0002546!1.08e-07!18;CL:0000219!1.42e-07!390;CL:0000115!5.10e-07!35 | ||
|ontology_enrichment_celltype_v019=CL:0000860;4.28e-39;33!CL:0002057;4.28e-39;33!CL:0000473;1.79e-26;39!CL:0000234;1.79e-26;39!CL:0000576;1.90e-23;48!CL:0000766;2.11e-14;69!CL:0000623;1.55e-10;3!CL:0002087;1.16e-09;104!CL:0000763;3.05e-09;100!CL:0002600;6.99e-08;2!CL:0002139;9.17e-08;24!CL:0000115;6.10e-07;36 | |ontology_enrichment_celltype_v019=CL:0000860;4.28e-39;33!CL:0002057;4.28e-39;33!CL:0000473;1.79e-26;39!CL:0000234;1.79e-26;39!CL:0000576;1.90e-23;48!CL:0000766;2.11e-14;69!CL:0000623;1.55e-10;3!CL:0002087;1.16e-09;104!CL:0000763;3.05e-09;100!CL:0002600;6.99e-08;2!CL:0002139;9.17e-08;24!CL:0000115;6.10e-07;36 | ||
|ontology_enrichment_celltype_v019_2=CL:0000860,4.23e-44,42;CL:0002057,4.23e-44,42;CL:0000473,9.09e-38,48;CL:0000234,9.09e-38,48;CL:0000766,9.18e-32,72;CL:0002194,6.50e-29,59;CL:0000576,6.50e-29,59;CL:0000040,6.50e-29,59;CL:0000559,6.50e-29,59;CL:0002009,8.99e-28,61;CL:0000839,2.02e-27,66;CL:0000557,6.40e-27,67;CL:0000738,1.23e-21,136;CL:0002031,1.69e-20,120;CL:0002087,3.39e-20,115;CL:0000763,7.66e-19,108;CL:0000049,7.66e-19,108;CL:0002032,5.60e-17,161;CL:0000837,5.60e-17,161;CL:0000037,6.33e-16,168;CL:0000988,1.07e-14,177;CL:0000623,1.04e-10,3;CL:0000825,1.04e-10,3;CL:0002600,4.53e-08,2;CL:0002139,7.79e-08,24;CL:0000115,2.00e-07,36 | |||
|ontology_enrichment_development_v019=CL:0002057;1.95e-31;42 | |ontology_enrichment_development_v019=CL:0002057;1.95e-31;42 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!1.04e-15!112;UBERON:0002371!8.96e-15!80;UBERON:0002390!1.50e-14!102;UBERON:0003061!1.50e-14!102;UBERON:0001474!6.71e-14!86;UBERON:0004765!1.73e-13!101;UBERON:0001434!1.73e-13!101;UBERON:0003081!1.97e-11!216;UBERON:0002204!2.66e-11!167;UBERON:0002405!2.77e-10!115;UBERON:0002384!2.22e-08!375;UBERON:0001986!1.08e-07!18;UBERON:0004638!1.08e-07!18;UBERON:0004852!1.08e-07!18;UBERON:0000487!2.57e-07!22 | |ontology_enrichment_uberon=UBERON:0002193!1.04e-15!112;UBERON:0002371!8.96e-15!80;UBERON:0002390!1.50e-14!102;UBERON:0003061!1.50e-14!102;UBERON:0001474!6.71e-14!86;UBERON:0004765!1.73e-13!101;UBERON:0001434!1.73e-13!101;UBERON:0003081!1.97e-11!216;UBERON:0002204!2.66e-11!167;UBERON:0002405!2.77e-10!115;UBERON:0002384!2.22e-08!375;UBERON:0001986!1.08e-07!18;UBERON:0004638!1.08e-07!18;UBERON:0004852!1.08e-07!18;UBERON:0000487!2.57e-07!22 | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,5.36e-23,76;UBERON:0002405,4.55e-21,93;UBERON:0001474,7.37e-21,82;UBERON:0004765,1.88e-18,90;UBERON:0002193,3.30e-17,108;UBERON:0002390,1.94e-16,98;UBERON:0003061,1.94e-16,98;UBERON:0001434,5.50e-16,100;UBERON:0003081,9.74e-11,203;UBERON:0002204,7.50e-09,167 | |||
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| ||
|short_description=p4@LOC100129186 | |short_description=p4@LOC100129186 | ||
}} | }} |
Latest revision as of 23:30, 17 September 2015
Short description: | p4@LOC100129186 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_LOC100129186_5end |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | -460bp_to_AK128204_5end |
EntrezGene: | LOC100129186 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 4.23e-44 | 42 |
CD14-positive, CD16-negative classical monocyte | 4.23e-44 | 42 |
defensive cell | 9.09e-38 | 48 |
phagocyte | 9.09e-38 | 48 |
myeloid leukocyte | 9.18e-32 | 72 |
monopoietic cell | 6.50e-29 | 59 |
monocyte | 6.50e-29 | 59 |
monoblast | 6.50e-29 | 59 |
promonocyte | 6.50e-29 | 59 |
macrophage dendritic cell progenitor | 8.99e-28 | 61 |
myeloid lineage restricted progenitor cell | 2.02e-27 | 66 |
granulocyte monocyte progenitor cell | 6.40e-27 | 67 |
leukocyte | 1.23e-21 | 136 |
hematopoietic lineage restricted progenitor cell | 1.69e-20 | 120 |
nongranular leukocyte | 3.39e-20 | 115 |
myeloid cell | 7.66e-19 | 108 |
common myeloid progenitor | 7.66e-19 | 108 |
hematopoietic oligopotent progenitor cell | 5.60e-17 | 161 |
hematopoietic multipotent progenitor cell | 5.60e-17 | 161 |
hematopoietic stem cell | 6.33e-16 | 168 |
hematopoietic cell | 1.07e-14 | 177 |
natural killer cell | 1.04e-10 | 3 |
pro-NK cell | 1.04e-10 | 3 |
smooth muscle cell of trachea | 4.53e-08 | 2 |
endothelial cell of vascular tree | 7.79e-08 | 24 |
endothelial cell | 2.00e-07 | 36 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 5.36e-23 | 76 |
immune system | 4.55e-21 | 93 |
bone element | 7.37e-21 | 82 |
skeletal element | 1.88e-18 | 90 |
hemolymphoid system | 3.30e-17 | 108 |
hematopoietic system | 1.94e-16 | 98 |
blood island | 1.94e-16 | 98 |
skeletal system | 5.50e-16 | 100 |
lateral plate mesoderm | 9.74e-11 | 203 |
musculoskeletal system | 7.50e-09 | 167 |