FFCP PHASE1:Hg19::chr12:31478836..31478859,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=58516 | |EntrezGene=58516 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30702 | |HGNC=30702 | ||
|TSSclassifier=strong | |||
|UniProt=F5H6U2 | |UniProt=F5H6U2 | ||
|association_with_transcript=-408bp_to_ENST00000543615_5end | |association_with_transcript=-408bp_to_ENST00000543615_5end | ||
|cluster_id=chr12:31478836..31478859,- | |||
|description=CAGE_peak_5_at_FAM60A_5end | |description=CAGE_peak_5_at_FAM60A_5end | ||
|id=chr12:31478836..31478859,- | |id=chr12:31478836..31478859,- | ||
|ontology_enrichment_celltype=CL:0000838!2.56e-17!52;CL:0000542!3.50e-17!53;CL:0000051!3.50e-17!53;CL:0000084!4.26e-14!25;CL:0000827!4.26e-14!25;CL:0000791!1.21e-11!18;CL:0000789!1.21e-11!18;CL:0002420!1.21e-11!18;CL:0002419!1.21e-11!18;CL:0000790!1.21e-11!18;CL:0000066!6.20e-08!254;CL:0000625!1.44e-07!11 | |ontology_enrichment_celltype=CL:0000838!2.56e-17!52;CL:0000542!3.50e-17!53;CL:0000051!3.50e-17!53;CL:0000084!4.26e-14!25;CL:0000827!4.26e-14!25;CL:0000791!1.21e-11!18;CL:0000789!1.21e-11!18;CL:0002420!1.21e-11!18;CL:0002419!1.21e-11!18;CL:0000790!1.21e-11!18;CL:0000066!6.20e-08!254;CL:0000625!1.44e-07!11 | ||
|ontology_enrichment_celltype_v019=CL:0000084;4.74e-21;25!CL:0000791;3.64e-18;18!CL:0000789;3.64e-18;18!CL:0002419;3.64e-18;18!CL:0000542;7.83e-13;53!CL:0000625;1.50e-11;11!CL:0000624;9.13e-08;6 | |ontology_enrichment_celltype_v019=CL:0000084;4.74e-21;25!CL:0000791;3.64e-18;18!CL:0000789;3.64e-18;18!CL:0002419;3.64e-18;18!CL:0000542;7.83e-13;53!CL:0000625;1.50e-11;11!CL:0000624;9.13e-08;6 | ||
|ontology_enrichment_celltype_v019_2=CL:0000838,1.05e-24,52;CL:0000542,5.97e-24,53;CL:0000051,5.97e-24,53;CL:0000084,2.97e-21,25;CL:0000827,2.97e-21,25;CL:0000791,1.81e-18,18;CL:0000789,1.81e-18,18;CL:0002420,1.81e-18,18;CL:0002419,1.81e-18,18;CL:0000790,1.81e-18,18;CL:0000625,1.22e-11,11;CL:0002087,6.57e-09,115;CL:0000738,6.94e-09,136;CL:0000624,5.40e-08,6;CL:0002031,3.04e-07,120 | |||
|ontology_enrichment_development_v019=CL:0000790;3.64e-18;18!CL:0000051;7.83e-13;53 | |ontology_enrichment_development_v019=CL:0000790;3.64e-18;18!CL:0000051;7.83e-13;53 | ||
|ontology_enrichment_disease=DOID:162!3.64e-17!235;DOID:14566!9.33e-17!239;DOID:305!9.79e-14!106;DOID:0050687!4.78e-13!143;DOID:0050686!1.16e-08!137 | |ontology_enrichment_disease=DOID:162!3.64e-17!235;DOID:14566!9.33e-17!239;DOID:305!9.79e-14!106;DOID:0050687!4.78e-13!143;DOID:0050686!1.16e-08!137 | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2=DOID:305,2.88e-12,106;DOID:14566,5.98e-11,239;DOID:162,1.23e-10,235;DOID:0050687,7.09e-10,143;DOID:0050686,6.05e-07,137 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0,0,0.140954404095971,0,0,0,0,0.631719873426831,0,0,0.697801167972428,0.218441372130172,0.263766978228454,0.495065411840187,0.994192127183747,0.672325146451775,1.20538905604795,0,1.95173119516203,0.369363174230364,0.204000691244253,0,0.85870796139317,0.684372125364421,0.502170558379211,2.06316195519468,2.05251473624864,2.44003422072406,1.18009283054671,0,0.464448369948228,0.919421224478927,0.30120591877825,0.369754010166788,0.697204805222715,0.995184627411951,1.46800219667424,1.10799081706375,0.802177789880567,1.08505435357926,0,0.32389366601898,0.257575567634187,0.145398238779565,0,0,0,0,0,0.28769239232215,0.256160706529101,0,0.344745680736619,0,0,0,0,0.224723484445085,0.306083892370903,0,0,0,0,0,0.290209238628584,0,0,0,0.521482918420201,0.217188844705117,0,0,0.316462387440884,0,0.212604299965044,0,0.22465726229299,0.300353785683013,0,0,0,0.182664153764634,0,0,0,0.426730222566507,0.400395987036012,0.574752439954483,1.32208974556972,2.86216126360609,3.41527781465669,1.76171156811282,3.05818582500183,1.32171328579026,1.68152568894461,0.263384084775077,6.09800287352883,7.8602152549833,5.14003747498773,1.5046784585161,6.51844533267181,7.57516489175573,9.74133642039557,1.33692548262208,1.76763544484902,1.55073726208535,0.541607727530031,1.15282187753108,0.780356085359269,1.15106533222573,1.38175008892924,0.869409257205157,3.85545064221357,6.95606153033254,5.22677619024884,1.69964014046349,4.98186641682498,2.74901956386104,5.31341353240956,3.50421955756506,3.90650072313851,4.75226022224187,1.05402583354441,2.94369205655162,2.49861453104692,2.60454977248419,1.64225599384209,4.23374160771938,3.7441627409691,4.92402973201517,0,0,0.639312809217652,0,0,0,0.795285947051099,0,0.945348171640679,1.99556457716308,0.966182642624386,0.130979075497713,0.364295288292542,0.370784442784429,1.62273696827342,1.0447784237956,0.930705723632056,1.43094374583205,2.28797964312051,0.74291500265913,0.79504962946682,0,0.347140501607594,0,0,0.825354125820202,0.417989933073621,0.516833518338658,0,0.33472061276467,0,0,0,0,0,0.17859945656816,0.22452937262617,0.112611480483322,0,0,0.732806975721629,0,0,0.872188104285069,0.496971951695318,0.379891534993739,0.264818361626438,0,0,0.560677600142307,1.06748995729705,0.74000264525148,0.311211035399766,0.67355336034844,0.653847612453835,0.151357427644931,0.576175924479999,0,0.936480230490962,0.570471821544449,0.747243402759005,0.469737994575059,0.161872944368132,0.280901613404497,0.204154171254893,0.859840221182376,0.103325781175765,0,0,0,0,0.168336113954066,0.125118519871964,0.554128230968366,0.438977620880838,0.30648779579902,0.150238058906597,1.36118619792025,0.538168907066586,0.427114777637135,0.423863802319124,0,0,0.257640540045629,0.37223371266318,0.168776332241266,0.194874010322397,0,0,0,0.355009592516614,0.10075209822764,0.339121184620975,0.773043412653187,0.818238361772504,0.860413786167011,1.09776335516636,1.06023814657188,1.51052125730374,1.34759371519982,1.26160425437814,0,0,0,0,0.928735856063958,1.44375896333917,0.591534000199219,1.01150814046861,0.723033089650446,0.882351781859152,0.435758888184812,0.71181185733329,0.404493924480493,0.588664395376038,1.15424147083917,0.738155454624648,0,0,0,0,0,0.590789906681404,3.5317047953172,0.983907508344908,1.88724591328378,0.329250856225877,0,0.502644862058154,1.85176890317059,0,0,1.44331342025273,0.463721619900307,1.05667824812239,0.577465791044295,1.38895653772983,0.951270761172991,0,0,0,0.468008530278475,0.297262324577456,1.87467667973554,0.671928512795438,0.567100388969546,2.05984602216551,0.871901815541886,0,0,0.176096868026452,0.207328115540772,0,0,0,0,0,0,0.205654985406647,0.300343057843917,1.42913216315289,0.112131084345361,0.43596006883328,0.66004457238855,0.904902010304444,0,0.845302752556,0.26593811658487,1.04007436911366,0.257207374262142,0,0.532844358032199,0.142977993658148,0,0,0,0,0,0.904318131178758,0.871533458600294,0.599837947092342,0,0,0,0.479249710983165,0,0,0.144781306667579,1.02738161275192,0,1.34502172792233,2.75843064282698,1.07813787429759,2.31017465303547,1.52456774533478,2.60279707715243,0,0.502548796003046,0,0,0,0,0.49076596687656,0,0.813795071099207,0.207970861530807,0.892144943985809,0.315404830067869,0.234282829985426,0,0,0,0,0.737476674166813,0.434418072340414,0,0,2.68798433959754,4.09856981555372,2.34800627167578,0,0,0.907170879989041,0.248107807818777,0,0,0.256278298511402,0,0.160853921143607,0,0.154209693802656,0.177561725313127,0.246381468041427,0.519254429183621,0.813472649219715,0.846016147141356,1.40354529212299,0.920809889358963,0,0.182091168006717,0,0,1.92538342761037,0,0,1.47772280450026,0,0,0.431831832204279,0,0.541892875087706,0,0.764628819135115,2.49322802678617,0.447749509444357,0,0,0.256450125116389,1.31205858279882,1.95227036798582,0,0.54941678891006,0.577566499444116,0.574265537996172,0.650060246036521,0,0.96670718292122,0.154048617114644,0.307007349452259,0.827019434907183,0.644521469209642,0,0.596586391912706,0.712256285173899,1.81813406897076,0.768760269460425,0.76567627496750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| ||
|short_description=p5@FAM60A | |short_description=p5@FAM60A | ||
}} | }} |
Latest revision as of 03:19, 18 September 2015
Short description: | p5@FAM60A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_FAM60A_5end |
Coexpression cluster: | NA |
Association with transcript: | -408bp_to_ENST00000543615_5end |
EntrezGene: | FAM60A |
HGNC: | 30702 |
UniProt: | F5H6U2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphoid lineage restricted progenitor cell | 1.05e-24 | 52 |
lymphocyte | 5.97e-24 | 53 |
common lymphoid progenitor | 5.97e-24 | 53 |
T cell | 2.97e-21 | 25 |
pro-T cell | 2.97e-21 | 25 |
mature alpha-beta T cell | 1.81e-18 | 18 |
alpha-beta T cell | 1.81e-18 | 18 |
immature T cell | 1.81e-18 | 18 |
mature T cell | 1.81e-18 | 18 |
immature alpha-beta T cell | 1.81e-18 | 18 |
CD8-positive, alpha-beta T cell | 1.22e-11 | 11 |
nongranular leukocyte | 6.57e-09 | 115 |
leukocyte | 6.94e-09 | 136 |
CD4-positive, alpha-beta T cell | 5.40e-08 | 6 |
hematopoietic lineage restricted progenitor cell | 3.04e-07 | 120 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 2.88e-12 | 106 |
disease of cellular proliferation | 5.98e-11 | 239 |
cancer | 1.23e-10 | 235 |
cell type cancer | 7.09e-10 | 143 |
organ system cancer | 6.05e-07 | 137 |