FFCP PHASE1:Hg19::chr5:92899690..92899725,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr5:92899690..92899725,- | |||
|coexpression_cluster_id=C154 | |coexpression_cluster_id=C154 | ||
|description=CAGE_peak_at_chr5:92899690..92899725,- | |description=CAGE_peak_at_chr5:92899690..92899725,- | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0000322!6.06e-14!3;CL:0000082!1.37e-10!19 | |ontology_enrichment_celltype=CL:0000322!6.06e-14!3;CL:0000082!1.37e-10!19 | ||
|ontology_enrichment_celltype_v019=CL:1000415;2.05e-15;2!CL:0000082;3.96e-14;19!CL:0000322;7.42e-11;3 | |ontology_enrichment_celltype_v019=CL:1000415;2.05e-15;2!CL:0000082;3.96e-14;19!CL:0000322;7.42e-11;3 | ||
|ontology_enrichment_celltype_v019_2=CL:1000415,2.74e-15,2;CL:0000082,3.79e-14,19;CL:0000322,7.42e-11,3 | |||
|ontology_enrichment_development_v019=UBERON:0001041;1.42e-15;30!UBERON:0008947;1.66e-09;29 | |ontology_enrichment_development_v019=UBERON:0001041;1.42e-15;30!UBERON:0008947;1.66e-09;29 | ||
|ontology_enrichment_disease=DOID:3908!8.73e-15!5;DOID:305!1.40e-14!106;DOID:1324!3.16e-10!15;DOID:3910!5.09e-10!2;DOID:0050615!1.52e-09!16;DOID:0050687!1.77e-09!143;DOID:3905!3.18e-08!9;DOID:1749!2.17e-07!14;DOID:4556!4.87e-07!3;DOID:162!5.51e-07!235 | |ontology_enrichment_disease=DOID:3908!8.73e-15!5;DOID:305!1.40e-14!106;DOID:1324!3.16e-10!15;DOID:3910!5.09e-10!2;DOID:0050615!1.52e-09!16;DOID:0050687!1.77e-09!143;DOID:3905!3.18e-08!9;DOID:1749!2.17e-07!14;DOID:4556!4.87e-07!3;DOID:162!5.51e-07!235 | ||
|ontology_enrichment_disease_v019=DOID:3908;1.28e-23;5!DOID:1324;1.10e-17;15!DOID:0050615;1.25e-16;16!DOID:3910;1.33e-15;2!DOID:3905;1.31e-13;9!DOID:4556;9.90e-11;3 | |ontology_enrichment_disease_v019=DOID:3908;1.28e-23;5!DOID:1324;1.10e-17;15!DOID:0050615;1.25e-16;16!DOID:3910;1.33e-15;2!DOID:3905;1.31e-13;9!DOID:4556;9.90e-11;3 | ||
|ontology_enrichment_disease_v019_2=DOID:3908,1.14e-23,5;DOID:1324,1.04e-17,15;DOID:0050615,1.18e-16,16;DOID:3910,1.33e-15,2;DOID:3905,1.23e-13,9;DOID:305,2.72e-13,106;DOID:4556,8.99e-11,3;DOID:0050687,6.71e-10,143 | |||
|ontology_enrichment_uberon=UBERON:0004821!6.06e-14!3;UBERON:0003215!6.06e-14!3;UBERON:0002299!6.06e-14!3;UBERON:0006524!6.06e-14!3;UBERON:0008874!6.06e-14!3;UBERON:0002169!6.06e-14!3;UBERON:0004894!6.06e-14!3;UBERON:0004802!1.37e-10!19;UBERON:0000115!1.37e-10!19;UBERON:0004903!5.09e-10!2;UBERON:0002173!5.09e-10!2;UBERON:0002186!5.09e-10!2;UBERON:0002048!5.26e-09!22;UBERON:0000117!5.26e-09!22;UBERON:0000171!5.26e-09!22;UBERON:0000170!5.26e-09!22;UBERON:0005597!5.26e-09!22;UBERON:0000118!5.26e-09!22;UBERON:0004807!7.37e-07!28 | |ontology_enrichment_uberon=UBERON:0004821!6.06e-14!3;UBERON:0003215!6.06e-14!3;UBERON:0002299!6.06e-14!3;UBERON:0006524!6.06e-14!3;UBERON:0008874!6.06e-14!3;UBERON:0002169!6.06e-14!3;UBERON:0004894!6.06e-14!3;UBERON:0004802!1.37e-10!19;UBERON:0000115!1.37e-10!19;UBERON:0004903!5.09e-10!2;UBERON:0002173!5.09e-10!2;UBERON:0002186!5.09e-10!2;UBERON:0002048!5.26e-09!22;UBERON:0000117!5.26e-09!22;UBERON:0000171!5.26e-09!22;UBERON:0000170!5.26e-09!22;UBERON:0005597!5.26e-09!22;UBERON:0000118!5.26e-09!22;UBERON:0004807!7.37e-07!28 | ||
|ontology_enrichment_uberon_v019=UBERON:0002294;4.36e-17;7!UBERON:0001173;4.36e-17;7!UBERON:0004903;1.33e-15;2!UBERON:0002173;1.33e-15;2!UBERON:0002186;1.33e-15;2!UBERON:0004802;3.96e-14;19!UBERON:0000115;3.96e-14;19!UBERON:0000058;2.37e-12;10!UBERON:0002048;2.64e-12;22!UBERON:0004807;2.64e-12;22!UBERON:0000117;2.64e-12;22!UBERON:0000171;2.64e-12;22!UBERON:0000170;2.64e-12;22!UBERON:0004821;7.42e-11;3!UBERON:0007499;7.42e-11;3!UBERON:0003215;7.42e-11;3!UBERON:0010368;7.42e-11;3!UBERON:0009911;7.42e-11;3!UBERON:0002299;7.42e-11;3!UBERON:0006524;7.42e-11;3!UBERON:0008874;7.42e-11;3!UBERON:0002169;7.42e-11;3!UBERON:0004894;7.42e-11;3!UBERON:0002110;9.90e-11;3!UBERON:0009856;1.82e-08;4!UBERON:0002394;2.26e-08;4!UBERON:0003928;2.26e-08;4!UBERON:0005911;2.09e-07;36!UBERON:0005181;2.11e-07;35!UBERON:0005178;4.82e-07;34!UBERON:0002224;4.82e-07;34 | |ontology_enrichment_uberon_v019=UBERON:0002294;4.36e-17;7!UBERON:0001173;4.36e-17;7!UBERON:0004903;1.33e-15;2!UBERON:0002173;1.33e-15;2!UBERON:0002186;1.33e-15;2!UBERON:0004802;3.96e-14;19!UBERON:0000115;3.96e-14;19!UBERON:0000058;2.37e-12;10!UBERON:0002048;2.64e-12;22!UBERON:0004807;2.64e-12;22!UBERON:0000117;2.64e-12;22!UBERON:0000171;2.64e-12;22!UBERON:0000170;2.64e-12;22!UBERON:0004821;7.42e-11;3!UBERON:0007499;7.42e-11;3!UBERON:0003215;7.42e-11;3!UBERON:0010368;7.42e-11;3!UBERON:0009911;7.42e-11;3!UBERON:0002299;7.42e-11;3!UBERON:0006524;7.42e-11;3!UBERON:0008874;7.42e-11;3!UBERON:0002169;7.42e-11;3!UBERON:0004894;7.42e-11;3!UBERON:0002110;9.90e-11;3!UBERON:0009856;1.82e-08;4!UBERON:0002394;2.26e-08;4!UBERON:0003928;2.26e-08;4!UBERON:0005911;2.09e-07;36!UBERON:0005181;2.11e-07;35!UBERON:0005178;4.82e-07;34!UBERON:0002224;4.82e-07;34 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0004903,1.33e-15,2;UBERON:0002173,1.33e-15,2;UBERON:0002186,1.33e-15,2;UBERON:0004802,3.79e-14,19;UBERON:0000115,3.79e-14,19;UBERON:0002294,1.91e-13,9;UBERON:0001173,1.91e-13,9;UBERON:0004912,1.91e-13,9;UBERON:0002048,2.54e-12,22;UBERON:0000117,2.54e-12,22;UBERON:0000171,2.54e-12,22;UBERON:0000170,2.54e-12,22;UBERON:0005597,2.54e-12,22;UBERON:0000118,2.54e-12,22;UBERON:0004821,7.42e-11,3;UBERON:0003215,7.42e-11,3;UBERON:0010368,7.42e-11,3;UBERON:0009911,7.42e-11,3;UBERON:0002299,7.42e-11,3;UBERON:0006524,7.42e-11,3;UBERON:0008874,7.42e-11,3;UBERON:0002169,7.42e-11,3;UBERON:0004894,7.42e-11,3;UBERON:0002110,1.20e-10,3;UBERON:0006242,1.20e-10,3;UBERON:0004807,7.81e-10,28;UBERON:0005911,6.22e-09,82;UBERON:0005178,3.24e-08,34;UBERON:0002224,3.24e-08,34;UBERON:0005181,5.33e-08,35;UBERON:0005153,1.33e-07,37;UBERON:0008947,2.04e-07,38;UBERON:0003258,2.04e-07,38;UBERON:0005177,2.57e-07,101;UBERON:0000058,6.19e-07,19 | |||
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|short_description=p@chr5:92899690..92899725,- | |short_description=p@chr5:92899690..92899725,- | ||
}} | }} |
Latest revision as of 17:17, 30 July 2015
Short description: | p@chr5:92899690..92899725, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr5:92899690..92899725, - |
Coexpression cluster: | C154_adenocarcinoma_Mesenchymal_Cardiac_small_sacrococcigeal_Smooth_Prostate |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
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CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of gall bladder | 2.74e-15 | 2 |
epithelial cell of lung | 3.79e-14 | 19 |
pneumocyte | 7.42e-11 | 3 |
Ontology term | p-value | n |
---|---|---|
bronchoalveolar duct junction | 1.33e-15 | 2 |
alveolar duct | 1.33e-15 | 2 |
bronchiole | 1.33e-15 | 2 |
respiratory tract epithelium | 3.79e-14 | 19 |
lung epithelium | 3.79e-14 | 19 |
biliary system | 1.91e-13 | 9 |
biliary tree | 1.91e-13 | 9 |
biliary bud | 1.91e-13 | 9 |
lung | 2.54e-12 | 22 |
respiratory tube | 2.54e-12 | 22 |
respiration organ | 2.54e-12 | 22 |
pair of lungs | 2.54e-12 | 22 |
lung primordium | 2.54e-12 | 22 |
lung bud | 2.54e-12 | 22 |
pulmonary alveolus epithelium | 7.42e-11 | 3 |
alveolus | 7.42e-11 | 3 |
pulmonary lobule | 7.42e-11 | 3 |
lobule | 7.42e-11 | 3 |
alveolus of lung | 7.42e-11 | 3 |
alveolar system | 7.42e-11 | 3 |
pulmonary acinus | 7.42e-11 | 3 |
alveolar sac | 7.42e-11 | 3 |
alveolar wall | 7.42e-11 | 3 |
gallbladder | 1.20e-10 | 3 |
gall bladder primordium | 1.20e-10 | 3 |
respiratory system epithelium | 7.81e-10 | 28 |
endo-epithelium | 6.22e-09 | 82 |
thoracic cavity element | 3.24e-08 | 34 |
thoracic cavity | 3.24e-08 | 34 |
thoracic segment organ | 5.33e-08 | 35 |
epithelial bud | 1.33e-07 | 37 |
respiratory primordium | 2.04e-07 | 38 |
endoderm of foregut | 2.04e-07 | 38 |
trunk region element | 2.57e-07 | 101 |
duct | 6.19e-07 | 19 |
Ontology term | p-value | n |
---|---|---|
non-small cell lung carcinoma | 1.14e-23 | 5 |
lung cancer | 1.04e-17 | 15 |
respiratory system cancer | 1.18e-16 | 16 |
lung adenocarcinoma | 1.33e-15 | 2 |
lung carcinoma | 1.23e-13 | 9 |
carcinoma | 2.72e-13 | 106 |
lung large cell carcinoma | 8.99e-11 | 3 |
cell type cancer | 6.71e-10 | 143 |