FFCP PHASE1:Hg19::chr5:150591678..150591733,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2760 | |EntrezGene=2760 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4367 | |HGNC=4367 | ||
|TSSclassifier=strong | |||
|UniProt=E5RJD0 | |UniProt=E5RJD0 | ||
|association_with_transcript=0bp_to_ENST00000523466_5end | |association_with_transcript=0bp_to_ENST00000523466_5end | ||
|cluster_id=chr5:150591678..150591733,+ | |||
|coexpression_cluster_id=C141 | |coexpression_cluster_id=C141 | ||
|description=CAGE_peak_7_at_GM2A_5end | |description=CAGE_peak_7_at_GM2A_5end | ||
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|ontology_enrichment_celltype=CL:0000037!3.92e-55!172;CL:0000566!3.92e-55!172;CL:0000738!4.85e-52!140;CL:0000988!6.65e-50!182;CL:0002032!7.58e-49!165;CL:0000837!7.58e-49!165;CL:0002087!7.68e-43!119;CL:0000542!2.17e-38!53;CL:0000051!2.17e-38!53;CL:0000838!2.75e-37!52;CL:0002031!4.93e-37!124;CL:0000945!4.02e-22!24;CL:0000826!4.02e-22!24;CL:0000763!8.77e-16!112;CL:0000049!8.77e-16!112;CL:0002057!1.51e-14!42;CL:0000084!1.99e-14!25;CL:0000827!1.99e-14!25;CL:0000236!2.00e-14!14;CL:0000860!6.41e-13!45;CL:0000791!2.78e-11!18;CL:0000789!2.78e-11!18;CL:0002420!2.78e-11!18;CL:0002419!2.78e-11!18;CL:0000790!2.78e-11!18;CL:0000134!4.77e-11!358;CL:0000766!8.85e-11!76;CL:0002320!3.05e-10!365;CL:0002009!1.68e-09!65;CL:0002194!1.51e-08!63;CL:0000576!1.51e-08!63;CL:0000040!1.51e-08!63;CL:0000559!1.51e-08!63;CL:0000219!3.38e-08!390;CL:0000557!6.82e-08!71;CL:0000094!6.77e-07!8;CL:0000839!8.02e-07!70 | |ontology_enrichment_celltype=CL:0000037!3.92e-55!172;CL:0000566!3.92e-55!172;CL:0000738!4.85e-52!140;CL:0000988!6.65e-50!182;CL:0002032!7.58e-49!165;CL:0000837!7.58e-49!165;CL:0002087!7.68e-43!119;CL:0000542!2.17e-38!53;CL:0000051!2.17e-38!53;CL:0000838!2.75e-37!52;CL:0002031!4.93e-37!124;CL:0000945!4.02e-22!24;CL:0000826!4.02e-22!24;CL:0000763!8.77e-16!112;CL:0000049!8.77e-16!112;CL:0002057!1.51e-14!42;CL:0000084!1.99e-14!25;CL:0000827!1.99e-14!25;CL:0000236!2.00e-14!14;CL:0000860!6.41e-13!45;CL:0000791!2.78e-11!18;CL:0000789!2.78e-11!18;CL:0002420!2.78e-11!18;CL:0002419!2.78e-11!18;CL:0000790!2.78e-11!18;CL:0000134!4.77e-11!358;CL:0000766!8.85e-11!76;CL:0002320!3.05e-10!365;CL:0002009!1.68e-09!65;CL:0002194!1.51e-08!63;CL:0000576!1.51e-08!63;CL:0000040!1.51e-08!63;CL:0000559!1.51e-08!63;CL:0000219!3.38e-08!390;CL:0000557!6.82e-08!71;CL:0000094!6.77e-07!8;CL:0000839!8.02e-07!70 | ||
|ontology_enrichment_celltype_v019=CL:0000945;3.77e-33;24!CL:0000542;3.42e-26;53!CL:0000236;2.51e-17;13!CL:0002087;3.84e-16;104!CL:0000084;1.18e-13;25!CL:0000860;1.40e-13;33!CL:0002057;1.40e-13;33!CL:0000738;4.94e-13;136!CL:0000473;1.22e-09;39!CL:0000234;1.22e-09;39!CL:0000094;4.93e-09;8!CL:0000988;3.82e-08;177!CL:0000791;5.06e-08;18!CL:0000789;5.06e-08;18!CL:0002419;5.06e-08;18!CL:0000784;1.03e-07;3 | |ontology_enrichment_celltype_v019=CL:0000945;3.77e-33;24!CL:0000542;3.42e-26;53!CL:0000236;2.51e-17;13!CL:0002087;3.84e-16;104!CL:0000084;1.18e-13;25!CL:0000860;1.40e-13;33!CL:0002057;1.40e-13;33!CL:0000738;4.94e-13;136!CL:0000473;1.22e-09;39!CL:0000234;1.22e-09;39!CL:0000094;4.93e-09;8!CL:0000988;3.82e-08;177!CL:0000791;5.06e-08;18!CL:0000789;5.06e-08;18!CL:0002419;5.06e-08;18!CL:0000784;1.03e-07;3 | ||
|ontology_enrichment_celltype_v019_2=CL:0000738,1.00e-54,136;CL:0000037,1.19e-53,168;CL:0000988,7.31e-50,177;CL:0002032,2.65e-46,161;CL:0000837,2.65e-46,161;CL:0002087,3.52e-46,115;CL:0000542,1.96e-44,53;CL:0000051,1.96e-44,53;CL:0000838,1.14e-42,52;CL:0002031,1.75e-38,120;CL:0000945,3.65e-33,24;CL:0000826,3.65e-33,24;CL:0000236,4.69e-19,14;CL:0000134,4.07e-16,354;CL:0002320,2.06e-15,361;CL:0000084,1.36e-13,25;CL:0000827,1.36e-13,25;CL:0000219,5.96e-13,386;CL:0000763,1.05e-11,108;CL:0000049,1.05e-11,108;CL:0000860,9.44e-11,42;CL:0002057,9.44e-11,42;CL:0000034,1.24e-10,441;CL:0000766,1.61e-10,72;CL:0000048,5.45e-10,427;CL:0000723,1.38e-09,433;CL:0000094,4.22e-09,8;CL:0000473,7.86e-09,48;CL:0000234,7.86e-09,48;CL:0000791,6.00e-08,18;CL:0000789,6.00e-08,18;CL:0002420,6.00e-08,18;CL:0002419,6.00e-08,18;CL:0000790,6.00e-08,18;CL:0000784,1.02e-07,3;CL:0002009,1.22e-07,61;CL:0002194,3.56e-07,59;CL:0000576,3.56e-07,59;CL:0000040,3.56e-07,59;CL:0000559,3.56e-07,59 | |||
|ontology_enrichment_development_v019=CL:0000051;3.42e-26;53!CL:0002057;2.53e-08;42!CL:0000790;5.06e-08;18 | |ontology_enrichment_development_v019=CL:0000051;3.42e-26;53!CL:0002057;2.53e-08;42!CL:0000790;5.06e-08;18 | ||
|ontology_enrichment_disease=DOID:2531!7.70e-12!51;DOID:0060083!7.70e-12!51;DOID:0060058!5.03e-08!10;DOID:1240!1.32e-07!39 | |ontology_enrichment_disease=DOID:2531!7.70e-12!51;DOID:0060083!7.70e-12!51;DOID:0060058!5.03e-08!10;DOID:1240!1.32e-07!39 | ||
|ontology_enrichment_disease_v019=DOID:0060058;4.55e-09;10!DOID:2531;3.91e-07;51!DOID:0060083;3.91e-07;51 | |ontology_enrichment_disease_v019=DOID:0060058;4.55e-09;10!DOID:2531;3.91e-07;51!DOID:0060083;3.91e-07;51 | ||
|ontology_enrichment_disease_v019_2=DOID:2531,1.03e-11,51;DOID:0060083,1.03e-11,51;DOID:0060058,4.26e-09,10;DOID:1240,8.21e-08,39 | |||
|ontology_enrichment_uberon=UBERON:0002193!7.23e-13!112;UBERON:0002390!1.18e-12!102;UBERON:0003061!1.18e-12!102;UBERON:0002384!1.60e-09!375;UBERON:0004177!6.18e-08!7 | |ontology_enrichment_uberon=UBERON:0002193!7.23e-13!112;UBERON:0002390!1.18e-12!102;UBERON:0003061!1.18e-12!102;UBERON:0002384!1.60e-09!375;UBERON:0004177!6.18e-08!7 | ||
|ontology_enrichment_uberon_v019=UBERON:0004177;3.05e-07;5!UBERON:0005057;3.05e-07;5 | |ontology_enrichment_uberon_v019=UBERON:0004177;3.05e-07;5!UBERON:0005057;3.05e-07;5 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,1.86e-14,371;UBERON:0002390,3.57e-12,98;UBERON:0003061,3.57e-12,98;UBERON:0002193,3.77e-11,108;UBERON:0004177,5.36e-10,7;UBERON:0005057,5.36e-10,7;UBERON:0002370,1.17e-08,4;UBERON:0005058,1.17e-08,4;UBERON:0009113,1.17e-08,4;UBERON:0003295,1.17e-08,4;UBERON:0005562,1.17e-08,4;UBERON:0002405,4.17e-08,93 | |||
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| ||
|short_description=p7@GM2A | |short_description=p7@GM2A | ||
}} | }} |
Latest revision as of 08:17, 16 September 2015
Short description: | p7@GM2A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_GM2A_5end |
Coexpression cluster: | C141_Hodgkin_acute_thymus_chronic_vein_CD4_B |
Association with transcript: | 0bp_to_ENST00000523466_5end |
EntrezGene: | GM2A |
HGNC: | 4367 |
UniProt: | E5RJD0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
connective tissue | 1.86e-14 | 371 |
hematopoietic system | 3.57e-12 | 98 |
blood island | 3.57e-12 | 98 |
hemolymphoid system | 3.77e-11 | 108 |
hemopoietic organ | 5.36e-10 | 7 |
immune organ | 5.36e-10 | 7 |
thymus | 1.17e-08 | 4 |
hemolymphoid system gland | 1.17e-08 | 4 |
thymic region | 1.17e-08 | 4 |
pharyngeal gland | 1.17e-08 | 4 |
thymus primordium | 1.17e-08 | 4 |
immune system | 4.17e-08 | 93 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 1.03e-11 | 51 |
immune system cancer | 1.03e-11 | 51 |
lymphoma | 4.26e-09 | 10 |
leukemia | 8.21e-08 | 39 |