FFCP PHASE1:Hg19::chr2:166185518..166185522,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr2:166185518..166185522,+ | |||
|coexpression_cluster_id=C2666 | |coexpression_cluster_id=C2666 | ||
|description=CAGE_peak_at_chr2:166185518..166185522,+ | |description=CAGE_peak_at_chr2:166185518..166185522,+ | ||
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|ontology_enrichment_celltype=CL:1000306!8.30e-08!4;CL:0002547!8.30e-08!4 | |ontology_enrichment_celltype=CL:1000306!8.30e-08!4;CL:0002547!8.30e-08!4 | ||
|ontology_enrichment_celltype_v019=CL:0000047;9.07e-18;2 | |ontology_enrichment_celltype_v019=CL:0000047;9.07e-18;2 | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006215;7.81e-45;3 | |ontology_enrichment_development_v019=UBERON:0006215;7.81e-45;3 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0001874;5.05e-34;1!UBERON:0002037;4.85e-23;6!UBERON:0002702;9.07e-18;2!UBERON:0002680;9.73e-16;9!UBERON:0001895;9.73e-16;9!UBERON:0001870;2.59e-12;3!UBERON:0005383;2.59e-12;3!UBERON:0005382;2.59e-12;3!UBERON:0004733;4.54e-12;12!UBERON:0002028;4.54e-12;12!UBERON:0004732;3.21e-11;13!UBERON:0000369;1.44e-09;4!UBERON:0002435;1.44e-09;4!UBERON:0000204;1.44e-09;4!UBERON:0000073;4.21e-08;53!UBERON:0002616;4.21e-08;53!UBERON:0000955;1.37e-07;68!UBERON:0001017;5.78e-07;75!UBERON:0000200;8.48e-07;6 | |ontology_enrichment_uberon_v019=UBERON:0001874;5.05e-34;1!UBERON:0002037;4.85e-23;6!UBERON:0002702;9.07e-18;2!UBERON:0002680;9.73e-16;9!UBERON:0001895;9.73e-16;9!UBERON:0001870;2.59e-12;3!UBERON:0005383;2.59e-12;3!UBERON:0005382;2.59e-12;3!UBERON:0004733;4.54e-12;12!UBERON:0002028;4.54e-12;12!UBERON:0004732;3.21e-11;13!UBERON:0000369;1.44e-09;4!UBERON:0002435;1.44e-09;4!UBERON:0000204;1.44e-09;4!UBERON:0000073;4.21e-08;53!UBERON:0002616;4.21e-08;53!UBERON:0000955;1.37e-07;68!UBERON:0001017;5.78e-07;75!UBERON:0000200;8.48e-07;6 | ||
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|short_description=p@chr2:166185518..166185522,+ | |short_description=p@chr2:166185518..166185522,+ | ||
}} | }} |
Latest revision as of 02:06, 29 July 2015
Short description: | p@chr2:166185518..166185522, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:166185518..166185522, + |
Coexpression cluster: | C2666_cerebellum_hippocampus_medial_Neural_parietal_occipital_pineal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
putamen | 5.05e-34 | 1 |
cerebellum | 6.07e-23 | 6 |
rhombic lip | 6.07e-23 | 6 |
middle frontal gyrus | 6.48e-18 | 2 |
regional part of metencephalon | 1.13e-15 | 9 |
metencephalon | 1.13e-15 | 9 |
future metencephalon | 1.13e-15 | 9 |
frontal cortex | 2.07e-12 | 3 |
caudate-putamen | 2.59e-12 | 3 |
dorsal striatum | 2.59e-12 | 3 |
segmental subdivision of hindbrain | 5.08e-12 | 12 |
hindbrain | 5.08e-12 | 12 |
presumptive hindbrain | 5.08e-12 | 12 |
segmental subdivision of nervous system | 3.56e-11 | 13 |
central nervous system | 2.04e-10 | 81 |
regional part of nervous system | 2.28e-10 | 53 |
regional part of brain | 2.28e-10 | 53 |
neural tube | 7.51e-10 | 56 |
neural rod | 7.51e-10 | 56 |
future spinal cord | 7.51e-10 | 56 |
neural keel | 7.51e-10 | 56 |
posterior neural tube | 8.10e-10 | 15 |
chordal neural plate | 8.10e-10 | 15 |
corpus striatum | 1.44e-09 | 4 |
striatum | 1.44e-09 | 4 |
ventral part of telencephalon | 1.44e-09 | 4 |
future corpus striatum | 1.44e-09 | 4 |
nervous system | 1.94e-09 | 89 |
brain | 4.07e-08 | 68 |
future brain | 4.07e-08 | 68 |
neural plate | 6.43e-07 | 82 |
presumptive neural plate | 6.43e-07 | 82 |
gyrus | 7.58e-07 | 6 |