FFCP PHASE1:Hg19::chr11:18042446..18042463,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr11:18042446..18042463,- | |||
|coexpression_cluster_id=C73 | |coexpression_cluster_id=C73 | ||
|description=CAGE_peak_at_chr11:18042446..18042463,- | |description=CAGE_peak_at_chr11:18042446..18042463,- | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000167;3.58e-26;1!CL:0000164;3.58e-26;1!CL:0000502;3.58e-26;1!CL:0000172;3.58e-26;1!CL:0000173;3.58e-26;1 | |ontology_enrichment_celltype_v019=CL:0000167;3.58e-26;1!CL:0000164;3.58e-26;1!CL:0000502;3.58e-26;1!CL:0000172;3.58e-26;1!CL:0000173;3.58e-26;1 | ||
|ontology_enrichment_celltype_v019_2=CL:0000167,3.58e-26,1;CL:0000164,3.58e-26,1;CL:0000502,3.58e-26,1;CL:0000172,3.58e-26,1;CL:0000173,3.58e-26,1;CL:0002351,3.58e-26,1 | |||
|ontology_enrichment_development_v019=CL:0002351;3.58e-26;1!UBERON:0003056;1.41e-09;3 | |ontology_enrichment_development_v019=CL:0002351;3.58e-26;1!UBERON:0003056;1.41e-09;3 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:4430;3.58e-26;1!DOID:3119;5.00e-08;14!DOID:5409;1.92e-07;4 | |ontology_enrichment_disease_v019=DOID:4430;3.58e-26;1!DOID:3119;5.00e-08;14!DOID:5409;1.92e-07;4 | ||
|ontology_enrichment_disease_v019_2=DOID:4430,3.58e-26,1;DOID:3119,5.18e-08,14;DOID:5409,1.92e-07,4 | |||
|ontology_enrichment_uberon=UBERON:0003296!2.85e-11!4;UBERON:0010133!2.85e-11!4;UBERON:0001905!9.63e-11!2;UBERON:0002757!9.63e-11!2;UBERON:0010134!9.63e-11!2;UBERON:0002784!9.63e-11!2;UBERON:0005408!9.63e-11!2;UBERON:0001899!9.63e-11!2 | |ontology_enrichment_uberon=UBERON:0003296!2.85e-11!4;UBERON:0010133!2.85e-11!4;UBERON:0001905!9.63e-11!2;UBERON:0002757!9.63e-11!2;UBERON:0010134!9.63e-11!2;UBERON:0002784!9.63e-11!2;UBERON:0005408!9.63e-11!2;UBERON:0001899!9.63e-11!2 | ||
|ontology_enrichment_uberon_v019=UBERON:0001905;8.82e-51;2!UBERON:0002757;8.82e-51;2!UBERON:0010134;8.82e-51;2!UBERON:0005408;8.82e-51;2!UBERON:0001899;8.82e-51;2!UBERON:0003296;5.23e-26;4!UBERON:0010133;5.23e-26;4!UBERON:0002784;5.23e-26;4!UBERON:0001894;2.47e-15;7!UBERON:0002360;1.37e-13;2!UBERON:0000094;1.37e-13;2!UBERON:0010743;1.37e-13;2 | |ontology_enrichment_uberon_v019=UBERON:0001905;8.82e-51;2!UBERON:0002757;8.82e-51;2!UBERON:0010134;8.82e-51;2!UBERON:0005408;8.82e-51;2!UBERON:0001899;8.82e-51;2!UBERON:0003296;5.23e-26;4!UBERON:0010133;5.23e-26;4!UBERON:0002784;5.23e-26;4!UBERON:0001894;2.47e-15;7!UBERON:0002360;1.37e-13;2!UBERON:0000094;1.37e-13;2!UBERON:0010743;1.37e-13;2 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001905,8.82e-51,2;UBERON:0002757,8.82e-51,2;UBERON:0010134,8.82e-51,2;UBERON:0005408,8.82e-51,2;UBERON:0001899,8.82e-51,2;UBERON:0003296,5.23e-26,4;UBERON:0010133,5.23e-26,4;UBERON:0002784,5.23e-26,4;UBERON:0001894,2.47e-15,7;UBERON:0006222,2.47e-15,7;UBERON:0002360,1.21e-13,2;UBERON:0000094,1.21e-13,2;UBERON:0010743,1.21e-13,2 | |||
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|short_description=p@chr11:18042446..18042463,- | |short_description=p@chr11:18042446..18042463,- | ||
}} | }} |
Latest revision as of 20:35, 23 July 2015
Short description: | p@chr11:18042446..18042463, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:18042446..18042463, - |
Coexpression cluster: | C73_pineal_eye_retina_caudate_cerebellum_left_parietal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
peptide hormone secreting cell | 3.58e-26 | 1 |
enteroendocrine cell | 3.58e-26 | 1 |
type D enteroendocrine cell | 3.58e-26 | 1 |
somatostatin secreting cell | 3.58e-26 | 1 |
pancreatic D cell | 3.58e-26 | 1 |
progenitor cell of endocrine pancreas | 3.58e-26 | 1 |
Ontology term | p-value | n |
---|---|---|
pineal body | 8.82e-51 | 2 |
regional part of epithalamus | 8.82e-51 | 2 |
secretory circumventricular organ | 8.82e-51 | 2 |
circumventricular organ | 8.82e-51 | 2 |
epithalamus | 8.82e-51 | 2 |
gland of diencephalon | 5.23e-26 | 4 |
neuroendocrine gland | 5.23e-26 | 4 |
regional part of diencephalon | 5.23e-26 | 4 |
diencephalon | 2.47e-15 | 7 |
future diencephalon | 2.47e-15 | 7 |
meninx | 1.21e-13 | 2 |
membrane organ | 1.21e-13 | 2 |
meningeal cluster | 1.21e-13 | 2 |
Ontology term | p-value | n |
---|---|---|
somatostatinoma | 3.58e-26 | 1 |
gastrointestinal system cancer | 5.18e-08 | 14 |
lung small cell carcinoma | 1.92e-07 | 4 |