FFCP PHASE1:Hg19::chr13:52733980..52734002,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4752 | |EntrezGene=4752 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7746 | |HGNC=7746 | ||
|TSSclassifier=strong | |||
|UniProt=P51956,G3V202 | |UniProt=P51956,G3V202 | ||
|association_with_transcript=0bp_to_ENST00000339406,ENST00000548127,NM_001146099,NM_002498,NR_027415,uc010tgx.1,uc010tgy.1_5end | |association_with_transcript=0bp_to_ENST00000339406,ENST00000548127,NM_001146099,NM_002498,NR_027415,uc010tgx.1,uc010tgy.1_5end | ||
|cluster_id=chr13:52733980..52734002,- | |||
|coexpression_cluster_id=C55 | |coexpression_cluster_id=C55 | ||
|description=CAGE_peak_4_at_NEK3_5end | |description=CAGE_peak_4_at_NEK3_5end | ||
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|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000182;1.75e-10;12 | |ontology_enrichment_celltype_v019=CL:0000182;1.75e-10;12 | ||
|ontology_enrichment_celltype_v019_2=CL:0000182,1.77e-10,12 | |||
|ontology_enrichment_development_v019=UBERON:0004161;6.13e-07;11 | |ontology_enrichment_development_v019=UBERON:0004161;6.13e-07;11 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:1799;1.09e-08;1!DOID:10165;1.09e-08;1!DOID:1798;1.09e-08;1 | |ontology_enrichment_disease_v019=DOID:1799;1.09e-08;1!DOID:10165;1.09e-08;1!DOID:1798;1.09e-08;1 | ||
|ontology_enrichment_disease_v019_2=DOID:1799,6.65e-09,1;DOID:10165,6.65e-09,1;DOID:1798,6.65e-09,1 | |||
|ontology_enrichment_uberon=UBERON:0002323!5.38e-08!46;UBERON:0000467!9.74e-08!625;UBERON:0000480!1.20e-07!626;UBERON:0004458!5.13e-07!49;UBERON:0000468!6.34e-07!659 | |ontology_enrichment_uberon=UBERON:0002323!5.38e-08!46;UBERON:0000467!9.74e-08!625;UBERON:0000480!1.20e-07!626;UBERON:0004458!5.13e-07!49;UBERON:0000468!6.34e-07!659 | ||
|ontology_enrichment_uberon_v019=UBERON:0002134;1.09e-08;1!UBERON:0005208;1.09e-08;1!UBERON:0004145;1.09e-08;1!UBERON:0005946;1.09e-08;1!UBERON:0005965;1.09e-08;1!UBERON:0002078;1.09e-08;1!UBERON:0005409;5.44e-08;22!UBERON:0000160;8.52e-07;17!UBERON:0002108;8.65e-07;4 | |ontology_enrichment_uberon_v019=UBERON:0002134;1.09e-08;1!UBERON:0005208;1.09e-08;1!UBERON:0004145;1.09e-08;1!UBERON:0005946;1.09e-08;1!UBERON:0005965;1.09e-08;1!UBERON:0002078;1.09e-08;1!UBERON:0005409;5.44e-08;22!UBERON:0000160;8.52e-07;17!UBERON:0002108;8.65e-07;4 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002134,9.02e-09,1;UBERON:0005208,9.02e-09,1;UBERON:0005946,9.02e-09,1;UBERON:0005965,9.02e-09,1;UBERON:0002078,9.02e-09,1;UBERON:0005409,4.09e-07,25;UBERON:0002108,6.08e-07,4;UBERON:0000160,6.91e-07,17 | |||
|phase1_expression=0,0.214100523890983,0.140954404095971,0,0,0,2.53299878168311,0,0,0,0,0.218441372130172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821005894499457,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320929027076094,0,0,0.199463657621632,0,0,0,0,0,0,0,0,0,0,0,0,0.209658645508376,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.434539556882471,0.795285947051099,0,0,0,0.087834785693126,0.130979075497713,0,0,0,1.39303789839414,1.86141144726411,0,0,0,0,0,0,0,0,0.275118041940067,0.208994966536811,0.258416759169329,0.35576626268671,1.00416183829401,1.20848795132744,0,0.24406205754817,0.735326160691737,0,0.892997282840798,0.22452937262617,0.675668882899933,1.53316637465883,0,0,0,0,0,0,0,0,0,0.354668382198357,0,1.06748995729705,0,0,0,0.163461903113459,0,0,0,0,0,0,0,0.161872944368132,0,0,0.122834317311768,0,0,0,0.910161361938026,0,0,0,0,0,0.30648779579902,0.300476117813194,0.113432183160021,0.179389635688862,0,0.211931901159562,0.600182192168805,0,0,0,0,0.0974370051611986,0.252433774244115,0.0920498986422993,0.161646056818812,1.06502877754984,0.10075209822764,0,0.386521706326594,0,0,0,0,0.232387885739037,0,0,0,1.56449532329816,0,0,0,0,0,0.337169380156203,0.723033089650446,0.110293972732394,0.871517776369625,0,0,0,0.38474715694639,0,0,0,0,1.26755034821831,0,0,0,0.614942192715568,0,0.329250856225877,0,0.100528972411631,0,0,0,0,0,0,1.58803092537181,0.462985512576611,0,0,0,0,0,0,0,0,0.283550194484773,0.268675568108545,0,0,0,0,0,0.144119953416961,0,0,0.381988425558278,0,0,0,0,0,0,0,0.07333828582095,0,0,0,0.26593811658487,0,0,0,0,0,0,0,0.65147236858747,0,0.791951872933429,0,0,0.099972991182057,1.2162378064119,0,0,0,0,0,0,0,0,0,0,0,0,0.254094624222463,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0868836144680828,0,0,0,0,0,0.303127571446259,0,0.30239029332968,0,0.306923946576125,0,0.128139149255701,0.511707249066704,0,0,0.154209693802656,0.177561725313127,0.246381468041427,0,0.116210378459959,0.604297247958111,0,0.184161977871793,0,0,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0.509752546090077,0,0.223874754722178,0,0,0,0,0,0.412164046590889,0,0,0.574265537996172,0.650060246036521,0,0,0,0,0,0.214840489736547,0,0.0852266274161009,0.178064071293475,0.165284915360978,0.192190067365106,0.127612712494584,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0.190630193923825,0,0.42793898803392,0,0,0,0,0,0,0,0,0.48763373908959,0.243713489631284,0,0.136499911407986,0.141405431953713,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199579371432817,0,0,0,0,0,0.313359791546046,0,0,0,0,0,0,0,0.223676107892416,0.500547425135725,0,1.11362469558097,0,0,0,0,0,0.293016358543788,0.121360521749513,0,0,0,0,0,0,0.140669416410513,0,0,0,0.398495976502139,0.552567831062295,0.251932747854276,0,0,0,0.179736702294654,0,0,0.0986434056369336,0,0,0,0,0,0,0.524759999977174,0,0,0,0,0,0,0.173624994933292,0,0.120596438625408,0,0.110579259931225,0,0.219385397153973,0,0,0.307801034015188,0,0.69169171316418,0,0.325942115766024,0.638002319463839,0,0.533034776018635,0,0,0,0,0,0,0,0,0.210998064528027,0,0.141353071433941,0.432777279484182,0,1.41532103205343,3.05515072466813,0,0,0,0,0.802577647298789,0.234264445725339,0,0,0,0,0,0.61214552326098,0.063186579628488,0,0.207376382794494,0,0,0.313932918407225,0,0.284609546029793,0,0.347119476670262,0,0.0870592065804026,0,0,0,0.146178634172371,0.164230914106418,0.0969890164884194,0.176512253383001,0,0,0,0.0633107959558787,0,0.801588202515337,0.85381197895741,0.19980960958213,0.432271251462318,0.114536596165916,0,0.288109595976299,0,0,0,0,0,0,0.600420288709789,0.136905378891993,0,0,0,0.558564802544508,0,1.43574604915363,0,0,0,0.268733889946905,0.360299883542404,0,5.75117230842733,5.93394180344398,6.47074021000175,0.196854963029498,0,0,0.136203406111576,0,0.137539436597234,0,0.449947783103001,0,0.0607495566580247,0,0.315222829196793,0.0524545881349981,0,0,0,0,0,0,0,0.864221491201268,0,0,0,0.340776043570843,0.113312091520126,0.58620893471233,0,0,0.13223260174269,0.342173675768659,0.704815022316672,0.106787412567695,0.943225830597996,0.414239055347196,0,0,0,0,0,0.2506898940227,0,0,0,0,0,0.1251909307065,0,0.110929051536852,0.0620964029413835,0,0,0.303298235083296,0,0,0.468334905806882,0.28984205722165,0,0.233713309847224,0,0,0,0,0,0.453692771289717,0,0,0.477890301491107,0.449803112163605,0.310525913752519,0,0.265841714557995,1.04349012362347,0.150257608997218,0,0.406870733204662,0.545545977607678,0,0.464033759878494,0,0,0,0.673498977531838,0,0,0,0,0,0.463044948647668,0,0,0,0,0,0,0,0,0,1.21543982470953,0.138258436151731,0.194860308839388,0,0,0,0,0,0,0,0,0,0,0.139879507719444,0,0,0.107824811396682,0,0,0,0,0,0,0.318004350653419,0,0,0,0.3062454773532,0,0,0,0,0,0.0691572524642179,0,0,0,0,0,0,1.1441462864015,0.690359926060101,0,0.225630985047772,0,0,1.57144016688853,0.655087670040387,0.443568258651136,0,0,0,0.126831620387814,0,0,0,0,0.127762427639595,0.535701835878287,0,0.606965604236632,0,0.443511850813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| ||
|short_description=p4@NEK3 | |short_description=p4@NEK3 | ||
}} | }} |
Latest revision as of 19:27, 17 September 2015
Short description: | p4@NEK3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_NEK3_5end |
Coexpression cluster: | C55_hepatocellular_Intestinal_liver_Prostate_fibrosarcoma_Hepatocyte_hepatoblastoma |
Association with transcript: | 0bp_to_ENST00000339406, ENST00000548127, NM_001146099, NM_002498, NR_027415, uc010tgx.1, uc010tgy.1_5end |
EntrezGene: | NEK3 |
HGNC: | 7746 |
UniProt: | P51956G3V202 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 1.77e-10 | 12 |
Ontology term | p-value | n |
---|---|---|
tricuspid valve | 9.02e-09 | 1 |
right atrium valve | 9.02e-09 | 1 |
outflow tract of atrium | 9.02e-09 | 1 |
outflow part of right atrium | 9.02e-09 | 1 |
right cardiac atrium | 9.02e-09 | 1 |
gastrointestinal system | 4.09e-07 | 25 |
small intestine | 6.08e-07 | 4 |
intestine | 6.91e-07 | 17 |
Ontology term | p-value | n |
---|---|---|
islet cell tumor | 6.65e-09 | 1 |
endocrine pancreas cancer | 6.65e-09 | 1 |
pancreatic endocrine carcinoma | 6.65e-09 | 1 |