FFCP PHASE1:Hg19::chr2:46588040..46588071,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr2:46588040..46588071,+ | |||
|coexpression_cluster_id=C1507 | |coexpression_cluster_id=C1507 | ||
|description=CAGE_peak_at_chr2:46588040..46588071,+ | |description=CAGE_peak_at_chr2:46588040..46588071,+ | ||
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|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0002138;7.45e-07;6 | |ontology_enrichment_celltype_v019=CL:0002138;7.45e-07;6 | ||
|ontology_enrichment_celltype_v019_2=CL:0005020,6.07e-07,6;CL:0002138,6.07e-07,6;CL:0005022,6.07e-07,6 | |||
|ontology_enrichment_development_v019=CL:0005022;7.45e-07;6 | |ontology_enrichment_development_v019=CL:0005022;7.45e-07;6 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!3.26e-15!115;UBERON:0000477!1.56e-13!286;UBERON:0000468!6.82e-13!659;UBERON:0004111!1.30e-12!241;UBERON:0000467!4.69e-12!625;UBERON:0000480!7.11e-12!626;UBERON:0000483!5.45e-11!309;UBERON:0000062!8.34e-11!511;UBERON:0000119!2.10e-10!312;UBERON:0000025!5.73e-08!194;UBERON:0002050!6.32e-08!605;UBERON:0005423!6.32e-08!605;UBERON:0000064!8.18e-08!219;UBERON:0000923!1.15e-07!604;UBERON:0005291!1.15e-07!604;UBERON:0006598!1.15e-07!604;UBERON:0002532!1.15e-07!604;UBERON:0000922!1.15e-07!612;UBERON:0000481!1.15e-07!347;UBERON:0003929!4.05e-07!54;UBERON:0000475!7.52e-07!365 | |ontology_enrichment_uberon=UBERON:0007023!3.26e-15!115;UBERON:0000477!1.56e-13!286;UBERON:0000468!6.82e-13!659;UBERON:0004111!1.30e-12!241;UBERON:0000467!4.69e-12!625;UBERON:0000480!7.11e-12!626;UBERON:0000483!5.45e-11!309;UBERON:0000062!8.34e-11!511;UBERON:0000119!2.10e-10!312;UBERON:0000025!5.73e-08!194;UBERON:0002050!6.32e-08!605;UBERON:0005423!6.32e-08!605;UBERON:0000064!8.18e-08!219;UBERON:0000923!1.15e-07!604;UBERON:0005291!1.15e-07!604;UBERON:0006598!1.15e-07!604;UBERON:0002532!1.15e-07!604;UBERON:0000922!1.15e-07!612;UBERON:0000481!1.15e-07!347;UBERON:0003929!4.05e-07!54;UBERON:0000475!7.52e-07!365 | ||
|ontology_enrichment_uberon_v019=UBERON:0003688;1.64e-07;6!UBERON:0002358;1.64e-07;6!UBERON:0003684;1.64e-07;6!UBERON:0001178;1.64e-07;6!UBERON:0002423;1.98e-07;25!UBERON:0002107;2.33e-07;19!UBERON:0006925;2.33e-07;19!UBERON:0004151;6.88e-07;3 | |ontology_enrichment_uberon_v019=UBERON:0003688;1.64e-07;6!UBERON:0002358;1.64e-07;6!UBERON:0003684;1.64e-07;6!UBERON:0001178;1.64e-07;6!UBERON:0002423;1.98e-07;25!UBERON:0002107;2.33e-07;19!UBERON:0006925;2.33e-07;19!UBERON:0004151;6.88e-07;3 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,6.45e-11,114;UBERON:0009569,2.33e-09,112;UBERON:0002417,3.11e-09,60;UBERON:0000916,3.11e-09,60;UBERON:0003929,4.56e-08,54;UBERON:0003688,1.25e-07,6;UBERON:0002358,1.25e-07,6;UBERON:0003684,1.25e-07,6;UBERON:0001178,1.25e-07,6;UBERON:0009497,2.10e-07,25;UBERON:0000015,2.10e-07,25;UBERON:0002423,2.10e-07,25;UBERON:0006235,2.10e-07,25;UBERON:0004161,2.10e-07,25;UBERON:0002107,2.63e-07,19;UBERON:0006925,2.63e-07,19;UBERON:0008836,2.63e-07,19;UBERON:0004923,3.03e-07,66;UBERON:0008835,3.07e-07,22;UBERON:0003894,3.07e-07,22;UBERON:0004151,7.25e-07,3;UBERON:0009854,8.12e-07,23 | |||
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|phase1_expression=1.09007027562334,2.5692062866918,2.25527046553554,3.00219895059391,1.78784437770915,1.74467704820074,0,0.631719873426831,0.783556884599516,0.245733936501509,0,0,1.58260186937072,0,0,0,0.602694528023977,0,0,0,0.204000691244253,0.313454721478088,0,0,0,0,0,0,0,0,0,0,0.6024118375565,0.369754010166788,0,0,0,0,0,0,0.447830948479849,0.971680998056939,0.257575567634187,0,0,0,0,0,0,0,0,0,0,0,1.35426486594342,0.376484679085209,0.545812300115692,0,0,0.641858054152187,0.639337125799041,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.253019692019503,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0.383587685530591,1.44575660953827,1.50401373190767,1.44846518960824,0,1.45990461090791,0.0945348171640679,1.10864698731282,0.87834785693126,0.916853528483988,0.364295288292542,0.370784442784429,0,0.174129737299267,0.398873881556595,0,0,0,0.39752481473341,0,0.347140501607594,1.13061588384802,0,0.550236083880135,0.835979866147242,1.29208379584664,3.5576626268671,1.33888245105868,0,0.760272105718513,2.4406205754817,0.367663080345869,0.81014194788176,0.267899184852239,0.44905874525234,0.450445921933289,3.06633274931766,0,1.09921046358244,0,0,0.436094052142534,0.496971951695318,0.506522046658319,0.132409180813219,0,0,0.560677600142307,2.1349799145941,0.74000264525148,0.311211035399766,0.538842688278752,0.817309515567294,0.454072282934794,0.576175924479999,0.468642863667593,0.624320153660641,0,0,0,0.161872944368132,0,0.204154171254893,0.245668634623536,0,3.56400857184616,3.95627086845691,0,0.718618141816238,0,0.250237039743928,0,0,0,3.45547535485173,0.113432183160021,0,0.640672166455702,0.423863802319124,0,0.515262646192195,0,1.11670113798954,0,0.194874010322397,0,0.736399189138395,0.161646056818812,0,0.201504196455281,0.339121184620975,0.386521706326594,1.09098448236334,0.860413786167011,0,0,0,0.10366105501537,0.252320850875628,0,0,0,0,0.464367928031979,0,0.354920400119532,0,0,0.110293972732394,0.217879444092406,0.474541238222193,0.539325232640658,0,0,4.42893272774789,1.40241773803446,0,0,3.80265104465493,4.91413608338813,7.68026878685825,0,0.491953754172454,0.171567810298526,0.658501712451753,1.1240175325762,0.301586917234893,0.0925884451585296,0,0,0,0.115930404975077,0.117408694235822,0.577465791044295,2.31492756288305,1.52203321787679,0,0,0,0,0.297262324577456,0,0.16798212819886,0.141775097242386,0.268675568108545,0.581267877027924,0.383382679165211,0,0.352193736052904,0.414656231081544,0.144119953416961,0.75745460055828,0,0.381988425558278,0,0,0,0,0,0,0,0,0.517086863031111,0,0,0,0,0,0,0,0.857867961948885,0,0.823240336780769,0.325736184293735,1.06617584622764,0,0,0,0.199945982364114,0,0.502257091432126,2.10833939483032,0.958499421966331,0,0,0.144781306667579,0.61642896765115,0,0,0,0,0,0,0,0,0,0,0,0,0.414415513436035,0.12269149171914,0,0,3.74347550755453,2.3195768543631,1.73472656537328,0.234282829985426,1.50473049863859,2.27407504055985,0,0,0.368738337083406,0.868836144680828,0,0,0,0,0,0,0,0.30239029332968,0.992431231275107,0,1.12264037773229,2.43464383585832,3.58195074346692,0.965123526861645,1.48418066444991,0,0.177561725313127,0.0821271560138091,0.519254429183621,0,0.483437798366489,0.802025881213139,1.10497186723076,0.574072240823034,0.546273504020151,2.09799063935079,0.451199612907412,0,0,0,0,2.27466768141793,1.02056223165909,0.431831832204279,1.54227252690289,0,0,0.254876273045038,0,0.447749509444357,0,0,0.256450125116389,0,1.62689197332152,8.24328093181778,0,0,0.574265537996172,0.650060246036521,0,0.290012154876366,0.154048617114644,0.15350367472613,0.137836572484531,0.322260734604821,0.290033387828457,0.255679882248303,0.0890320356467374,0.661139661443912,0.384380134730212,0.382838137483752,0.50578890427775,0,0,0,0,1.06461206063404,0,0.37064843820784,0.429374660225974,0,0.316379424718726,1.33441135746677,0.255897791311334,0,0,0,0.539617372749944,0,0.353437207037059,0,0,0,0.48763373908959,0.243713489631284,2.11300293513511,0.545999645631943,1.55545975149084,1.13008116620243,0,0,0.876901770507525,1.15755106853338,0,0.202910376962704,0.30982349809975,0,0,0,0,0,1.89996871767898,0.329294892959902,0,0,0.288666338176536,0,1.08890984861323,10.1675304838921,0,1.68471475667626,0,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0.490080431962063,0,0,0,0,0,0,0.211673582723883,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.66614393599564,0,0.18714054040822,9.96255619048879,0,0,0,1.19372242368845,5.93929361665277,0.307160702099232,0,0.984685914873589,1.11308705022906,0.329607748453519,0,2.39097585901284,0.552567831062295,0.503865495708552,0,0,0.622079175323615,0.0898683511473268,1.25314822272926,0,3.35387579165574,0,0,1.93866549219044,1.48428957058962,0,0,0,8.69999490521752,0.1137934482855,0.762760950878299,0.945550727071745,0,0,0,0.885741385813839,0.482385754501632,0,0.221158519862449,0.591095237907095,0,0.32681539055697,0.139423744278603,2.00070672109872,1.48124672601102,0,2.06442582142476,0.54323685961004,5.74202087517455,1.92354946143911,14.9249737285218,0,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| ||
|short_description=p@chr2:46588040..46588071,+ | |short_description=p@chr2:46588040..46588071,+ | ||
}} | }} |
Latest revision as of 10:28, 29 July 2015
Short description: | p@chr2:46588040..46588071, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:46588040..46588071, + |
Coexpression cluster: | C1507_lung_chorionic_liver_adipose_placenta_amniotic_breast |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphangioblast | 6.07e-07 | 6 |
endothelial cell of lymphatic vessel | 6.07e-07 | 6 |
vascular lymphangioblast | 6.07e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
adult organism | 6.45e-11 | 114 |
subdivision of trunk | 2.33e-09 | 112 |
abdominal segment of trunk | 3.11e-09 | 60 |
abdomen | 3.11e-09 | 60 |
gut epithelium | 4.56e-08 | 54 |
omentum | 1.25e-07 | 6 |
peritoneum | 1.25e-07 | 6 |
abdominal cavity | 1.25e-07 | 6 |
visceral peritoneum | 1.25e-07 | 6 |
epithelium of foregut-midgut junction | 2.10e-07 | 25 |
anatomical boundary | 2.10e-07 | 25 |
hepatobiliary system | 2.10e-07 | 25 |
foregut-midgut junction | 2.10e-07 | 25 |
septum transversum | 2.10e-07 | 25 |
liver | 2.63e-07 | 19 |
digestive gland | 2.63e-07 | 19 |
liver bud | 2.63e-07 | 19 |
organ component layer | 3.03e-07 | 66 |
hepatic diverticulum | 3.07e-07 | 22 |
liver primordium | 3.07e-07 | 22 |
cardiac chamber | 7.25e-07 | 3 |
digestive tract diverticulum | 8.12e-07 | 23 |