FFCP PHASE1:Hg19::chr1:244998869..244998874,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr1:244998869..244998874,+
|short_description=p10@FAM36A
|description=CAGE_peak_10_at_FAM36A_5end
|association_with_transcript=-43bp_to_ENST00000366528_5end
|...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=116228 | |EntrezGene=116228 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=26970 | |HGNC=26970 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-43bp_to_ENST00000366528_5end | |||
|cluster_id=chr1:244998869..244998874,+ | |||
|description=CAGE_peak_10_at_FAM36A_5end | |||
|id=chr1:244998869..244998874,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000540;2.44e-17;6!CL:0000404;2.44e-17;6!CL:0000047;8.05e-07;2!CL:0002319;8.12e-07;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000047,8.87e-23,8;CL:0000540,1.29e-17,6;CL:0000031,1.29e-17,6;CL:0000404,1.29e-17,6;CL:0002319,6.69e-07,25 | |||
|ontology_enrichment_development_v019=CL:0000031;2.44e-17;6!UBERON:0010122;8.05e-07;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:1909;4.96e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:1909,5.11e-07,2 | |||
|ontology_enrichment_uberon=UBERON:0001017!5.33e-26!82;UBERON:0000073!2.89e-25!94;UBERON:0001016!2.89e-25!94;UBERON:0001049!3.70e-25!57;UBERON:0005068!3.70e-25!57;UBERON:0006241!3.70e-25!57;UBERON:0007135!3.70e-25!57;UBERON:0005743!1.48e-24!86;UBERON:0007023!2.29e-21!115;UBERON:0000955!4.53e-21!69;UBERON:0006238!4.53e-21!69;UBERON:0002780!1.24e-20!41;UBERON:0001890!1.24e-20!41;UBERON:0006240!1.24e-20!41;UBERON:0002616!1.28e-20!59;UBERON:0003080!7.88e-20!42;UBERON:0003075!1.56e-19!86;UBERON:0007284!1.56e-19!86;UBERON:0002346!2.33e-19!90;UBERON:0001869!1.23e-18!32;UBERON:0001893!1.42e-18!34;UBERON:0002020!1.61e-18!34;UBERON:0003528!1.61e-18!34;UBERON:0002791!1.06e-17!33;UBERON:0000924!1.29e-16!173;UBERON:0006601!1.29e-16!173;UBERON:0004121!1.66e-16!169;UBERON:0000153!1.97e-14!129;UBERON:0007811!1.97e-14!129;UBERON:0003056!2.03e-14!61;UBERON:0000033!4.55e-14!123;UBERON:0000956!6.10e-13!25;UBERON:0000203!6.10e-13!25;UBERON:0002619!4.07e-11!22;UBERON:0001950!4.83e-11!20;UBERON:0000025!1.24e-09!194;UBERON:0004111!5.05e-09!241;UBERON:0000477!2.07e-08!286;UBERON:0000481!1.39e-07!347;UBERON:0002308!3.70e-07!9;UBERON:0000125!3.70e-07!9;UBERON:0000483!4.95e-07!309;UBERON:0000119!5.23e-07!312 | |||
|ontology_enrichment_uberon_v019=UBERON:0002298;3.90e-17;6!UBERON:0000988;1.13e-15;3!UBERON:0002021;8.86e-10;5!UBERON:0004733;7.45e-09;12!UBERON:0002028;7.45e-09;12!UBERON:0004732;3.27e-08;13!UBERON:0001873;8.05e-07;2!UBERON:0002148;8.05e-07;2!UBERON:0006331;8.05e-07;2!UBERON:0009662;8.05e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.21e-17,81;UBERON:0002298,2.38e-17,6;UBERON:0000988,7.83e-16,3;UBERON:0001016,9.40e-16,89;UBERON:0002021,1.21e-09,5;UBERON:0000955,2.96e-09,68;UBERON:0006238,2.96e-09,68;UBERON:0004121,5.48e-09,171;UBERON:0000924,5.48e-09,171;UBERON:0006601,5.48e-09,171;UBERON:0004733,5.84e-09,12;UBERON:0002028,5.84e-09,12;UBERON:0007277,5.84e-09,12;UBERON:0004732,2.61e-08,13;UBERON:0011216,1.36e-07,223;UBERON:0003076,2.89e-07,15;UBERON:0003057,2.89e-07,15;UBERON:0000073,5.85e-07,53;UBERON:0002616,5.85e-07,53;UBERON:0002148,7.20e-07,2;UBERON:0006331,7.20e-07,2;UBERON:0009662,7.20e-07,2 | |||
|phase1_expression=0,0,0,1.0007329835313,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.572471974262113,0.547497700291537,0.125542639594803,0,0,0,0,0,0.154816123316076,0,0.30120591877825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211255286311942,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0,0,0,0,0,0.111410456885174,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.821127996921047,0,0,0,0,0,0,0,0,0,0,0,0.283604451492204,0,0,0.261958150995425,0,0,0,0,0,0,0,0,0.596287222100115,0,0,0,0,0,0,0,0,0,0,0.760272105718513,0.24406205754817,0,0,0.17859945656816,0.44905874525234,0,0,0,0,0,0,0,0,0.12663051166458,0.132409180813219,0,0.354668382198357,0,0,0.24666754841716,0,0,0,0.151357427644931,0,0.234321431833797,0,0.570471821544449,0.149448680551801,0,0,0,0,0.122834317311768,0,0,0,0,0,0,0,0,0,0.30648779579902,0.150238058906597,0,0,0,0,0,0,0,0,0,0.0974370051611986,0,0,0.161646056818812,0,0,0,0.193260853163297,0,0,0.243947412259191,0,0.116193942869518,0,0,0,0,0,0,0,0,0.236613600079688,0,0,0.330881918197182,0,0,0.674156540800822,0,0,0,0,0,0,0,0,0.590789906681404,0,0.122988438543114,0,0.109750285408626,0,0,0.0925884451585296,0.325808305310325,0,0,0.115930404975077,0.117408694235822,0.144366447761074,0,0.190254152234598,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207328115540772,0,0.12624243342638,0.190493682876507,0,0,0,0,0,0,0,0,0.1466765716419,0.258543431515556,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144781306667579,0,0,0.112085143993527,0.197030760201927,0,0,0.254094624222463,1.30139853857622,2.31986643833309,1.84267891867784,1.91381625495949,0,0,0,0,0,0.271265023699736,0.207970861530807,0,0.157702415033935,0.117141414992713,0,0,0,0,0,0.0868836144680828,0,0,0,0,0.106727557803444,0.606255142892519,0,0.30239029332968,0,0,0,0,0,0,0,0,0,0.0821271560138091,0,0.116210378459959,0,0,0.0920809889358963,0.114814448164607,0.182091168006717,0.131124414959424,0,0,0,0,0,0,0.170093705276516,0,0,0,0,0,0,0,0.219259876645935,0,0,0,0,0,0,0.082509499920588,0,0,0,0,0.154048617114644,0,0,0.107420244868274,0,0,0,0,0,0.127612712494584,0,0,0,0,0.308033580176089,0,0,0.18532421910392,0,0,0,0,0,0,0,0,0.179872457583315,0.274537029736055,0,0,0,0,0,0.487426979262569,0,0,0,0,0,0.66343897524122,0,0.578775534266688,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.08890984861323,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0.962479855263359,0,0,0,0.0711418433484141,0,0.199579371432817,0.383010740264733,0.211673582723883,0,0,0,0,0,0,0,0.201799707191048,0.425846237690326,0.343505344755765,0,0,0.166849141711909,0,0.278406173895242,0,0,0,0,0.18714054040822,0.146508179271894,0.121360521749513,0,0,0,0,0,0,0.844016498463076,0,0,0,0.19924798825107,0.276283915531148,0,0.102268682502155,0,0,0.269605053441981,0.358042349351218,0,0.197286811273867,0,0,1.93866549219044,0.463840490809256,3.99227596002388,0,0,0,0,0,0,0,0,0,0.885741385813839,1.08536794762867,0,0.552896299656123,0.886642856860642,0,0.21787692703798,0,0,0,0,0,0.217294743844016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0.611030144933625,0,0,0,0.606610196826093,0,0.468528891450678,0,0,0.242780379534093,0,0,0.61214552326098,0.063186579628488,0.450970258243478,0.103688191397247,0,0,0.313932918407225,0,0,0.277349346026277,0,0,0.174118413160805,0,0.51595809741485,0.0967563312890851,0.146178634172371,0.0821154570532092,0.0969890164884194,0,0.451961481561065,0,0,0.633107959558787,0.391102765469606,0.0801588202515337,0,0.19980960958213,0.144090417154106,0.458146384663663,0,0.14405479798815,0.124252535565433,0,0,0,0,0,0.600420288709789,0.410716136675979,0,0,0,0.279282401272254,0.229160424011684,0.717873024576814,0,0.429226048136571,0.446342914883745,0.268733889946905,0,1.16495949527454,0.236349546921671,0,0.26961417541674,0.196854963029498,0.0846733320657845,0,0.953423842781029,0,0.137539436597234,0,0,0,0.850493793212345,0,0.236417121897595,0.209818352539992,0,0,0.191915197319445,0,0,0,0,0,0.326587360109409,0,0.164185041498678,0,0,0.146552233678082,0,1.55139547633861,0.39669780522807,0,0,0.106787412567695,0.471612915298998,0,0.496166021811951,0,0,1.27668251554036,1.08803560673895,0,0,0,0.314108192500469,0.886068179966986,0.244052529803926,0.3755727921195,1.72022758707021,0.110929051536852,0.496771223531068,0,0.124980407962107,2.27473676312472,0,0,0,0.434763085832475,0,0,0,0,0,0,0.228840068396924,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.336749488765919,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.345430341731199,0,0.414775308455192,0,0,0,0,0,0,0,0.213383459388282,0,0,0.184105950251841,0.139879507719444,0,0.383683113910955,0.646948868380091,0,0.218419276384028,0.169732529954025,0,0.123935764259002,0,0.318004350653419,0.0788617450012534,0,0,0,0.578063025868136,0,0.319267718114302,1.23069818544453,1.00828678488687,0.276629009856872,0.645902582527404,0,0.196295437002051,0.11796972334774,0,0,0.381382095467167,0,0.198916222116275,0.526472298444801,0,0,0,0,0,0.742913430802341,0,0.620060389503552,0.380494861163441,0.546974809018219,0.548257766857182,0.496211178389294,0,0.127762427639595,0.535701835878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| ||
|short_description=p10@FAM36A | |||
}} | }} |
Latest revision as of 21:08, 16 September 2015
Short description: | p10@FAM36A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_10_at_FAM36A_5end |
Coexpression cluster: | NA |
Association with transcript: | -43bp_to_ENST00000366528_5end |
EntrezGene: | FAM36A |
HGNC: | 26970 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuronal stem cell | 8.87e-23 | 8 |
neuron | 1.29e-17 | 6 |
neuroblast | 1.29e-17 | 6 |
electrically signaling cell | 1.29e-17 | 6 |
neural cell | 6.69e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
central nervous system | 1.21e-17 | 81 |
brainstem | 2.38e-17 | 6 |
pons | 7.83e-16 | 3 |
nervous system | 9.40e-16 | 89 |
occipital lobe | 1.21e-09 | 5 |
brain | 2.96e-09 | 68 |
future brain | 2.96e-09 | 68 |
ectoderm-derived structure | 5.48e-09 | 171 |
ectoderm | 5.48e-09 | 171 |
presumptive ectoderm | 5.48e-09 | 171 |
segmental subdivision of hindbrain | 5.84e-09 | 12 |
hindbrain | 5.84e-09 | 12 |
presumptive hindbrain | 5.84e-09 | 12 |
segmental subdivision of nervous system | 2.61e-08 | 13 |
organ system subdivision | 1.36e-07 | 223 |
posterior neural tube | 2.89e-07 | 15 |
chordal neural plate | 2.89e-07 | 15 |
regional part of nervous system | 5.85e-07 | 53 |
regional part of brain | 5.85e-07 | 53 |
locus ceruleus | 7.20e-07 | 2 |
brainstem nucleus | 7.20e-07 | 2 |
hindbrain nucleus | 7.20e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
melanoma | 5.11e-07 | 2 |