FFCP PHASE1:Hg19::chr6:137366163..137366174,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(5 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=53832 | |EntrezGene=53832 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6003 | |HGNC=6003 | ||
|TSSclassifier=strong | |||
|UniProt=Q9UHF4,Q96SH7 | |UniProt=Q9UHF4,Q96SH7 | ||
|association_with_transcript=-62bp_to_ENST00000316649,ENST00000367746,ENST00000460306,ENST00000468393_5end | |association_with_transcript=-62bp_to_ENST00000316649,ENST00000367746,ENST00000460306,ENST00000468393_5end | ||
|cluster_id=chr6:137366163..137366174,- | |||
|description=CAGE_peak_3_at_IL20RA_5end | |description=CAGE_peak_3_at_IL20RA_5end | ||
|id=chr6:137366163..137366174,- | |id=chr6:137366163..137366174,- | ||
|ontology_enrichment_celltype=CL:0002076!1.91e-08!43;CL:0000223!2.18e-08!59 | |ontology_enrichment_celltype=CL:0002076!1.91e-08!43;CL:0000223!2.18e-08!59 | ||
|ontology_enrichment_celltype_v019=CL:0002535;1.48e-12;2!CL:0000083;7.27e-07;4!CL:0000244;9.63e-07;4!CL:0000731;9.63e-07;4 | |ontology_enrichment_celltype_v019=CL:0002535;1.48e-12;2!CL:0000083;7.27e-07;4!CL:0000244;9.63e-07;4!CL:0000731;9.63e-07;4 | ||
|ontology_enrichment_celltype_v019_2=CL:0002535,1.48e-12,2;CL:0000083,7.27e-07,4;CL:0000244,9.63e-07,4;CL:0000731,9.63e-07,4 | |||
|ontology_enrichment_development_v019=UBERON:0008801;5.13e-23;1!UBERON:0005754;5.13e-23;1!UBERON:0007297;3.24e-12;2 | |ontology_enrichment_development_v019=UBERON:0008801;5.13e-23;1!UBERON:0005754;5.13e-23;1!UBERON:0007297;3.24e-12;2 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:0050619;3.28e-23;1!DOID:1357;3.28e-23;1!DOID:4929;1.85e-12;2!DOID:299;1.16e-08;25!DOID:1793;7.27e-07;4 | |ontology_enrichment_disease_v019=DOID:0050619;3.28e-23;1!DOID:1357;3.28e-23;1!DOID:4929;1.85e-12;2!DOID:299;1.16e-08;25!DOID:1793;7.27e-07;4 | ||
|ontology_enrichment_disease_v019_2=DOID:0050619,3.28e-23,1;DOID:1357,3.28e-23,1;DOID:4929,1.85e-12,2;DOID:299,1.14e-08,25;DOID:1793,7.27e-07,4 | |||
|ontology_enrichment_uberon=UBERON:0004119!4.76e-17!169;UBERON:0000925!4.76e-17!169;UBERON:0006595!4.76e-17!169;UBERON:0001007!5.29e-16!155;UBERON:0001555!5.29e-16!155;UBERON:0007026!5.29e-16!155;UBERON:0004921!4.78e-15!129;UBERON:0004185!4.78e-15!129;UBERON:0000077!4.09e-12!130;UBERON:0000161!1.89e-11!35;UBERON:0007023!3.53e-10!115;UBERON:0001004!1.38e-09!72;UBERON:0005156!1.40e-09!59;UBERON:0000990!1.40e-09!59;UBERON:0001041!3.44e-09!98;UBERON:0004175!8.61e-09!25;UBERON:0005911!2.46e-08!82;UBERON:0000002!1.30e-07!6;UBERON:0001560!1.30e-07!6;UBERON:0000464!1.66e-07!104;UBERON:0003133!2.35e-07!48;UBERON:0000466!2.58e-07!126;UBERON:0000166!5.01e-07!21 | |ontology_enrichment_uberon=UBERON:0004119!4.76e-17!169;UBERON:0000925!4.76e-17!169;UBERON:0006595!4.76e-17!169;UBERON:0001007!5.29e-16!155;UBERON:0001555!5.29e-16!155;UBERON:0007026!5.29e-16!155;UBERON:0004921!4.78e-15!129;UBERON:0004185!4.78e-15!129;UBERON:0000077!4.09e-12!130;UBERON:0000161!1.89e-11!35;UBERON:0007023!3.53e-10!115;UBERON:0001004!1.38e-09!72;UBERON:0005156!1.40e-09!59;UBERON:0000990!1.40e-09!59;UBERON:0001041!3.44e-09!98;UBERON:0004175!8.61e-09!25;UBERON:0005911!2.46e-08!82;UBERON:0000002!1.30e-07!6;UBERON:0001560!1.30e-07!6;UBERON:0000464!1.66e-07!104;UBERON:0003133!2.35e-07!48;UBERON:0000466!2.58e-07!126;UBERON:0000166!5.01e-07!21 | ||
|ontology_enrichment_uberon_v019=UBERON:0001764;3.28e-23;1!UBERON:0001825;3.28e-23;1!UBERON:0001831;5.13e-23;1!UBERON:0000998;5.13e-23;1!UBERON:0006868;5.13e-23;1!UBERON:0001567;5.13e-23;1!UBERON:0006955;1.48e-12;2!UBERON:0004801;1.48e-12;2!UBERON:0001829;3.24e-12;2!UBERON:0004089;3.24e-12;2!UBERON:0006947;1.40e-08;3!UBERON:0004054;1.40e-08;3!UBERON:0005904;9.63e-07;4 | |ontology_enrichment_uberon_v019=UBERON:0001764;3.28e-23;1!UBERON:0001825;3.28e-23;1!UBERON:0001831;5.13e-23;1!UBERON:0000998;5.13e-23;1!UBERON:0006868;5.13e-23;1!UBERON:0001567;5.13e-23;1!UBERON:0006955;1.48e-12;2!UBERON:0004801;1.48e-12;2!UBERON:0001829;3.24e-12;2!UBERON:0004089;3.24e-12;2!UBERON:0006947;1.40e-08;3!UBERON:0004054;1.40e-08;3!UBERON:0005904;9.63e-07;4 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001764,3.28e-23,1;UBERON:0001825,3.28e-23,1;UBERON:0000998,4.10e-23,1;UBERON:0006868,4.10e-23,1;UBERON:0001831,6.40e-23,1;UBERON:0001567,6.40e-23,1;UBERON:0008801,6.40e-23,1;UBERON:0006955,1.48e-12,2;UBERON:0004801,1.48e-12,2;UBERON:0001829,3.62e-12,2;UBERON:0004089,3.62e-12,2;UBERON:0006947,1.30e-08,3;UBERON:0004054,1.30e-08,3;UBERON:0005904,9.11e-07,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30120591877825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.327447688744282,0.364295288292542,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286804595389004,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0,0.109750285408626,0,0.301586917234893,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.362578348774867,0,0.276242966807689,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0,0,0,0,0,0,0,0,0,0,0,0,0.0890320356467374,0,0,0,0.2023155617111,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.288666338176536,0,0,0,0,1.68471475667626,0.886860307073351,0,0,0,0,0,0,0,0,0,0,0,0.980160863924127,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.61421621224659,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.55025144421118,0,0,0,0.449341755736634,0,0,0.197286811273867,0,0,0,0,0,0,0,0.724999575434793,0.796554137998498,0,0.236387681767936,0,0,0,0,0,0,0,0.295547618953547,0,0,0.557694977114413,0.692552326534174,0,0,0,0,0,0,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176915129006678,0,0,0,0,0,0.802577647298789,0,0,0.19566461893209,0,0,0,0,0,0,0,0,0,0,0,0,0,0.694238953340524,0.195984794828755,0,0.17472666824203,0,0,0,0,0.775912131907355,0,0,0,0,0,0,0.64127056201227,0.85381197895741,0,0.432271251462318,0,0,0,0,3.29971648463514,0,0,0,0,0,0,0,0,0,0,0,0,0.199679000498991,0,0,0,0,0,0,0,0,0.196854963029498,0,0,0,0,0,0,0.2249738915515,0.77380195455795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146552233678082,0,0,0,0,3.52407511158336,0.213574825135389,0.157204305099666,0.414239055347196,0,0,0,0,0,0,0,0,2.98402782875445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.353909170043221,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0,0,0,0,0,1.64477330057155,0.496211178389294,0,0.383287282918786,0,0,0,0,0,0,0,0,0,0,0.111231401892069,0.235479278551542,0,0,0,0,0,0.142953088353313,0,0,0,0,0,0,0.691259661814092,0,0,0,1.69354820076372,0.22910686854405,0,0,0,0.294450700845729,0,0,0,0,0.485710993059139,0.233939463462106,0,0,0,0,0,0.0771741581079447,0.655678681511872,0,0,0.471353094203252,0,0,0,0,0,0,0,0.178553938605658,0,0,0.730336388246517,0.458729283404541,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0.852935927603924,0,0,0.186224142887574,0,0.0636471582781649,0,0.870866991587845,0.342233301085281,0.606168477131288,0.717222053926764,0,0,0,0,4.04213409479641,0,0.244482888365733,0,0.665756774185513,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30120591877825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.327447688744282,0.364295288292542,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286804595389004,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0,0.109750285408626,0,0.301586917234893,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.362578348774867,0,0.276242966807689,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0,0,0,0,0,0,0,0,0,0,0,0,0.0890320356467374,0,0,0,0.2023155617111,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.288666338176536,0,0,0,0,1.68471475667626,0.886860307073351,0,0,0,0,0,0,0,0,0,0,0,0.980160863924127,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.61421621224659,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.55025144421118,0,0,0,0.449341755736634,0,0,0.197286811273867,0,0,0,0,0,0,0,0.724999575434793,0.796554137998498,0,0.236387681767936,0,0,0,0,0,0,0,0.295547618953547,0,0,0.557694977114413,0.692552326534174,0,0,0,0,0,0,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176915129006678,0,0,0,0,0,0.802577647298789,0,0,0.19566461893209,0,0,0,0,0,0,0,0,0,0,0,0,0,0.694238953340524,0.195984794828755,0,0.17472666824203,0,0,0,0,0.775912131907355,0,0,0,0,0,0,0.64127056201227,0.85381197895741,0,0.432271251462318,0,0,0,0,3.29971648463514,0,0,0,0,0,0,0,0,0,0,0,0,0.199679000498991,0,0,0,0,0,0,0,0,0.196854963029498,0,0,0,0,0,0,0.2249738915515,0.77380195455795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146552233678082,0,0,0,0,3.52407511158336,0.213574825135389,0.157204305099666,0.414239055347196,0,0,0,0,0,0,0,0,2.98402782875445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.353909170043221,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0,0,0,0,0,1.64477330057155,0.496211178389294,0,0.383287282918786,0,0,0,0,0,0,0,0,0,0,0.111231401892069,0.235479278551542,0,0,0,0,0,0.142953088353313,0,0,0,0,0,0,0.691259661814092,0,0,0,1.69354820076372,0.22910686854405,0,0,0,0.294450700845729,0,0,0,0,0.485710993059139,0.233939463462106,0,0,0,0,0,0.0771741581079447,0.655678681511872,0,0,0.471353094203252,0,0,0,0,0,0,0,0.178553938605658,0,0,0.730336388246517,0.458729283404541,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0.852935927603924,0,0,0.186224142887574,0,0.0636471582781649,0,0.870866991587845,0.342233301085281,0.606168477131288,0.717222053926764,0,0,0,0,4.04213409479641,0,0.244482888365733,0,0.665756774185513,0,0 | ||
|short_description=p3@IL20RA | |short_description=p3@IL20RA | ||
}} | }} |
Latest revision as of 01:34, 25 September 2015
Short description: | p3@IL20RA |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_IL20RA_5end |
Coexpression cluster: | NA |
Association with transcript: | -62bp_to_ENST00000316649, ENST00000367746, ENST00000460306, ENST00000468393_5end |
EntrezGene: | IL20RA |
HGNC: | 6003 |
UniProt: | Q9UHF4Q96SH7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of cervix | 1.48e-12 | 2 |
epithelial cell of pancreas | 7.27e-07 | 4 |
transitional epithelial cell | 9.63e-07 | 4 |
urothelial cell | 9.63e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
maxillary sinus | 3.28e-23 | 1 |
paranasal sinus | 3.28e-23 | 1 |
seminal vesicle | 4.10e-23 | 1 |
seminal fluid secreting gland | 4.10e-23 | 1 |
parotid gland | 6.40e-23 | 1 |
cheek | 6.40e-23 | 1 |
parotid gland primordium | 6.40e-23 | 1 |
uterine epithelium | 1.48e-12 | 2 |
cervix epithelium | 1.48e-12 | 2 |
major salivary gland | 3.62e-12 | 2 |
midface | 3.62e-12 | 2 |
male genital duct | 1.30e-08 | 3 |
internal male genitalia | 1.30e-08 | 3 |
duct of male reproductive system | 9.11e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
paranasal sinus cancer | 3.28e-23 | 1 |
maxillary sinus cancer | 3.28e-23 | 1 |
tubular adenocarcinoma | 1.85e-12 | 2 |
adenocarcinoma | 1.14e-08 | 25 |
pancreatic cancer | 7.27e-07 | 4 |