FFCP PHASE1:Hg19::chr12:52910971..52910983,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr12:52910971..52910983,+ | |||
|coexpression_cluster_id=C207 | |coexpression_cluster_id=C207 | ||
|description=CAGE_peak_at_chr12:52910971..52910983,+ | |description=CAGE_peak_at_chr12:52910971..52910983,+ | ||
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|ontology_enrichment_celltype=CL:0002076!3.66e-31!43;CL:0002368!1.94e-25!13;CL:0000223!3.09e-21!59;CL:0002159!2.66e-17!13;CL:0000066!3.95e-17!254;CL:0002202!2.71e-14!9;CL:0002632!2.71e-14!9;CL:0002251!2.74e-12!21;CL:0002328!8.66e-12!3;CL:0000068!9.66e-12!3;CL:0000069!9.66e-12!3;CL:0000307!9.66e-12!3;CL:0000377!9.66e-12!3;CL:0002621!3.73e-11!3;CL:0000240!1.32e-10!6;CL:0000311!1.32e-10!6;CL:0000079!1.32e-10!6;CL:0000237!1.32e-10!6;CL:0000036!1.32e-10!6;CL:0000357!1.32e-10!6;CL:0000114!1.32e-10!6;CL:0002077!3.38e-09!33;CL:0000244!4.08e-09!4;CL:0000731!4.08e-09!4;CL:0002327!5.94e-09!4;CL:0000575!9.59e-09!2;CL:0000076!4.59e-08!62;CL:0000362!8.64e-08!8;CL:0000312!1.41e-07!5;CL:0000622!3.53e-07!5;CL:0000220!5.59e-07!246;CL:0002321!7.24e-07!248 | |ontology_enrichment_celltype=CL:0002076!3.66e-31!43;CL:0002368!1.94e-25!13;CL:0000223!3.09e-21!59;CL:0002159!2.66e-17!13;CL:0000066!3.95e-17!254;CL:0002202!2.71e-14!9;CL:0002632!2.71e-14!9;CL:0002251!2.74e-12!21;CL:0002328!8.66e-12!3;CL:0000068!9.66e-12!3;CL:0000069!9.66e-12!3;CL:0000307!9.66e-12!3;CL:0000377!9.66e-12!3;CL:0002621!3.73e-11!3;CL:0000240!1.32e-10!6;CL:0000311!1.32e-10!6;CL:0000079!1.32e-10!6;CL:0000237!1.32e-10!6;CL:0000036!1.32e-10!6;CL:0000357!1.32e-10!6;CL:0000114!1.32e-10!6;CL:0002077!3.38e-09!33;CL:0000244!4.08e-09!4;CL:0000731!4.08e-09!4;CL:0002327!5.94e-09!4;CL:0000575!9.59e-09!2;CL:0000076!4.59e-08!62;CL:0000362!8.64e-08!8;CL:0000312!1.41e-07!5;CL:0000622!3.53e-07!5;CL:0000220!5.59e-07!246;CL:0002321!7.24e-07!248 | ||
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|ontology_enrichment_development_v019=CL:0000357;3.99e-27;6!CL:0000114;3.99e-27;6!CL:0000377;1.41e-14;3!UBERON:0000358;1.45e-11;1!CL:0000223;1.62e-07;58 | |ontology_enrichment_development_v019=CL:0000357;3.99e-27;6!CL:0000114;3.99e-27;6!CL:0000377;1.41e-14;3!UBERON:0000358;1.45e-11;1!CL:0000223;1.62e-07;58 | ||
|ontology_enrichment_disease=DOID:1749!5.06e-08!14 | |ontology_enrichment_disease=DOID:1749!5.06e-08!14 | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
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|short_description=p@chr12:52910971..52910983,+ | |short_description=p@chr12:52910971..52910983,+ | ||
}} | }} |
Latest revision as of 09:36, 24 July 2015
Short description: | p@chr12:52910971..52910983, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:52910971..52910983, + |
Coexpression cluster: | C207_Corneal_Keratinocyte_Esophageal_Mammary_Bronchial_Urothelial_Sebocyte |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lower respiratory tract epithelium | 5.40e-14 | 3 |
epithelium of bronchus | 5.40e-14 | 3 |
cornea | 4.68e-11 | 4 |
eye surface | 4.68e-11 | 4 |
optic eminence | 4.68e-11 | 4 |
corneal primordium | 4.68e-11 | 4 |
tracheobronchial tree | 7.69e-11 | 15 |
lower respiratory tract | 7.69e-11 | 15 |
mammary gland | 1.09e-10 | 4 |
mammary bud | 1.09e-10 | 4 |
mammary ridge | 1.09e-10 | 4 |
mammary placode | 1.09e-10 | 4 |
urothelium | 2.88e-09 | 5 |
bronchus | 9.20e-09 | 5 |
transitional epithelium | 7.32e-08 | 6 |
saliva-secreting gland | 1.98e-07 | 6 |
gland of oral region | 1.98e-07 | 6 |
gland of foregut | 1.98e-07 | 6 |
oral gland | 1.98e-07 | 6 |
oral cavity | 1.98e-07 | 6 |
thoracic cavity element | 3.40e-07 | 34 |
thoracic cavity | 3.40e-07 | 34 |
epithelial fold | 3.79e-07 | 47 |
endoderm-derived structure | 4.75e-07 | 160 |
endoderm | 4.75e-07 | 160 |
presumptive endoderm | 4.75e-07 | 160 |
thoracic segment organ | 5.51e-07 | 35 |
surface structure | 5.69e-07 | 99 |
subdivision of head | 7.16e-07 | 49 |