FFCP PHASE1:Hg19::chr7:96635329..96635357,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1750 | |EntrezGene=1750 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2919 | |HGNC=2919 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-447bp_to_ENST00000493273_5end | |association_with_transcript=-447bp_to_ENST00000493273_5end | ||
|cluster_id=chr7:96635329..96635357,+ | |||
|coexpression_cluster_id=C4709 | |coexpression_cluster_id=C4709 | ||
|description=CAGE_peak_9_at_DLX6_5end | |description=CAGE_peak_9_at_DLX6_5end | ||
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|ontology_enrichment_celltype=CL:0000062!2.64e-10!11;CL:0000375!2.64e-10!11;CL:0000335!2.64e-10!11;CL:0000035!2.75e-08!20 | |ontology_enrichment_celltype=CL:0000062!2.64e-10!11;CL:0000375!2.64e-10!11;CL:0000335!2.64e-10!11;CL:0000035!2.75e-08!20 | ||
|ontology_enrichment_celltype_v019=CL:0000047;1.21e-13;2!CL:0000062;4.94e-12;9!CL:0000306;1.80e-07;4!CL:0002222;1.80e-07;4!CL:0002224;1.80e-07;4 | |ontology_enrichment_celltype_v019=CL:0000047;1.21e-13;2!CL:0000062;4.94e-12;9!CL:0000306;1.80e-07;4!CL:0002222;1.80e-07;4!CL:0002224;1.80e-07;4 | ||
|ontology_enrichment_celltype_v019_2=CL:0000062,4.83e-10,11;CL:0000375,4.83e-10,11;CL:0000335,4.83e-10,11;CL:0000306,1.92e-07,4;CL:0002222,1.92e-07,4;CL:0002224,1.92e-07,4 | |||
|ontology_enrichment_development_v019=UBERON:0010122;1.21e-13;2!CL:0000335;5.06e-10;11 | |ontology_enrichment_development_v019=UBERON:0010122;1.21e-13;2!CL:0000335;5.06e-10;11 | ||
|ontology_enrichment_disease=DOID:3095!3.40e-07!22;DOID:2994!3.40e-07!22;DOID:169!6.55e-07!6 | |ontology_enrichment_disease=DOID:3095!3.40e-07!22;DOID:2994!3.40e-07!22;DOID:169!6.55e-07!6 | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001869!4.49e-18!32;UBERON:0001893!9.23e-17!34;UBERON:0002791!2.24e-15!33;UBERON:0002020!8.29e-15!34;UBERON:0003528!8.29e-15!34;UBERON:0002780!9.51e-15!41;UBERON:0001890!9.51e-15!41;UBERON:0006240!9.51e-15!41;UBERON:0003080!2.75e-14!42;UBERON:0000073!2.11e-13!94;UBERON:0001016!2.11e-13!94;UBERON:0002420!1.47e-12!9;UBERON:0007245!1.47e-12!9;UBERON:0010009!1.47e-12!9;UBERON:0010011!1.47e-12!9;UBERON:0000454!1.47e-12!9;UBERON:0009663!1.53e-12!7;UBERON:0001017!1.57e-11!82;UBERON:0005743!1.06e-10!86;UBERON:0001950!1.63e-10!20;UBERON:0000369!2.14e-10!4;UBERON:0002435!2.14e-10!4;UBERON:0000204!2.14e-10!4;UBERON:0010082!2.14e-10!4;UBERON:0000924!2.28e-10!173;UBERON:0006601!2.28e-10!173;UBERON:0004121!5.27e-10!169;UBERON:0000955!9.11e-10!69;UBERON:0006238!9.11e-10!69;UBERON:0003056!1.19e-09!61;UBERON:0002308!1.48e-09!9;UBERON:0000125!1.48e-09!9;UBERON:0002619!2.16e-09!22;UBERON:0001049!2.45e-09!57;UBERON:0005068!2.45e-09!57;UBERON:0006241!2.45e-09!57;UBERON:0007135!2.45e-09!57;UBERON:0002616!7.14e-09!59;UBERON:0000013!2.56e-08!5;UBERON:0002410!2.56e-08!5;UBERON:0005383!2.85e-08!3;UBERON:0005382!2.85e-08!3;UBERON:0000956!4.86e-08!25;UBERON:0000203!4.86e-08!25;UBERON:0001872!9.10e-08!5;UBERON:0000153!1.42e-07!129;UBERON:0007811!1.42e-07!129;UBERON:0000033!1.44e-07!123 | |ontology_enrichment_uberon=UBERON:0001869!4.49e-18!32;UBERON:0001893!9.23e-17!34;UBERON:0002791!2.24e-15!33;UBERON:0002020!8.29e-15!34;UBERON:0003528!8.29e-15!34;UBERON:0002780!9.51e-15!41;UBERON:0001890!9.51e-15!41;UBERON:0006240!9.51e-15!41;UBERON:0003080!2.75e-14!42;UBERON:0000073!2.11e-13!94;UBERON:0001016!2.11e-13!94;UBERON:0002420!1.47e-12!9;UBERON:0007245!1.47e-12!9;UBERON:0010009!1.47e-12!9;UBERON:0010011!1.47e-12!9;UBERON:0000454!1.47e-12!9;UBERON:0009663!1.53e-12!7;UBERON:0001017!1.57e-11!82;UBERON:0005743!1.06e-10!86;UBERON:0001950!1.63e-10!20;UBERON:0000369!2.14e-10!4;UBERON:0002435!2.14e-10!4;UBERON:0000204!2.14e-10!4;UBERON:0010082!2.14e-10!4;UBERON:0000924!2.28e-10!173;UBERON:0006601!2.28e-10!173;UBERON:0004121!5.27e-10!169;UBERON:0000955!9.11e-10!69;UBERON:0006238!9.11e-10!69;UBERON:0003056!1.19e-09!61;UBERON:0002308!1.48e-09!9;UBERON:0000125!1.48e-09!9;UBERON:0002619!2.16e-09!22;UBERON:0001049!2.45e-09!57;UBERON:0005068!2.45e-09!57;UBERON:0006241!2.45e-09!57;UBERON:0007135!2.45e-09!57;UBERON:0002616!7.14e-09!59;UBERON:0000013!2.56e-08!5;UBERON:0002410!2.56e-08!5;UBERON:0005383!2.85e-08!3;UBERON:0005382!2.85e-08!3;UBERON:0000956!4.86e-08!25;UBERON:0000203!4.86e-08!25;UBERON:0001872!9.10e-08!5;UBERON:0000153!1.42e-07!129;UBERON:0007811!1.42e-07!129;UBERON:0000033!1.44e-07!123 | ||
|ontology_enrichment_uberon_v019=UBERON:0001873;1.21e-13;2!UBERON:0005383;1.53e-09;3!UBERON:0005382;1.53e-09;3!UBERON:0000369;1.80e-07;4!UBERON:0002435;1.80e-07;4!UBERON:0010077;1.80e-07;4!UBERON:0005389;1.80e-07;4!UBERON:0000484;1.80e-07;4!UBERON:0000965;1.80e-07;4!UBERON:0001803;1.80e-07;4!UBERON:0000204;1.80e-07;4 | |ontology_enrichment_uberon_v019=UBERON:0001873;1.21e-13;2!UBERON:0005383;1.53e-09;3!UBERON:0005382;1.53e-09;3!UBERON:0000369;1.80e-07;4!UBERON:0002435;1.80e-07;4!UBERON:0010077;1.80e-07;4!UBERON:0005389;1.80e-07;4!UBERON:0000484;1.80e-07;4!UBERON:0000965;1.80e-07;4!UBERON:0001803;1.80e-07;4!UBERON:0000204;1.80e-07;4 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001873,9.40e-14,2;UBERON:0010122,9.40e-14,2;UBERON:0005383,1.30e-09,3;UBERON:0005382,1.30e-09,3;UBERON:0000369,1.59e-07,4;UBERON:0002435,1.59e-07,4;UBERON:0000204,1.59e-07,4;UBERON:0010082,1.59e-07,4;UBERON:0010077,1.92e-07,4;UBERON:0005389,1.92e-07,4;UBERON:0000484,1.92e-07,4;UBERON:0002546,1.92e-07,4;UBERON:0000965,1.92e-07,4;UBERON:0001803,1.92e-07,4;UBERON:0003073,1.92e-07,4;UBERON:0005426,1.92e-07,4 | |||
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| ||
|short_description=p9@DLX6 | |short_description=p9@DLX6 | ||
}} | }} |
Latest revision as of 06:00, 20 September 2015
Short description: | p9@DLX6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_DLX6_5end |
Coexpression cluster: | C4709_Osteoblast_anaplastic_neuroblastoma_gastric_osteosarcoma_small_temporal |
Association with transcript: | -447bp_to_ENST00000493273_5end |
EntrezGene: | DLX6 |
HGNC: | 2919 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
osteoblast | 4.83e-10 | 11 |
osteoprogenitor cell | 4.83e-10 | 11 |
mesenchyme condensation cell | 4.83e-10 | 11 |
crystallin accumulating cell | 1.92e-07 | 4 |
vertebrate lens cell | 1.92e-07 | 4 |
lens epithelial cell | 1.92e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
caudate nucleus | 9.40e-14 | 2 |
future caudate nucleus | 9.40e-14 | 2 |
caudate-putamen | 1.30e-09 | 3 |
dorsal striatum | 1.30e-09 | 3 |
corpus striatum | 1.59e-07 | 4 |
striatum | 1.59e-07 | 4 |
ventral part of telencephalon | 1.59e-07 | 4 |
future corpus striatum | 1.59e-07 | 4 |
cuboidal epithelium | 1.92e-07 | 4 |
transparent eye structure | 1.92e-07 | 4 |
simple cuboidal epithelium | 1.92e-07 | 4 |
cranial placode | 1.92e-07 | 4 |
lens of camera-type eye | 1.92e-07 | 4 |
epithelium of lens | 1.92e-07 | 4 |
lens placode | 1.92e-07 | 4 |
lens vesicle | 1.92e-07 | 4 |