FFCP PHASE1:Hg19::chr11:2153108..2153139,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3481 | |EntrezGene=3481 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=5466 | |HGNC=5466 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-24bp_to_AK074614_5end | |association_with_transcript=-24bp_to_AK074614_5end | ||
|cluster_id=chr11:2153108..2153139,+ | |||
|coexpression_cluster_id=C172 | |coexpression_cluster_id=C172 | ||
|description=CAGE_peak_29_at_IGF2_5end | |description=CAGE_peak_29_at_IGF2_5end | ||
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|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000349;2.09e-21;19!CL:0002541;2.99e-07;3!CL:0002577;4.32e-07;3!CL:0002537;5.01e-07;5!CL:0002564;9.89e-07;3 | |ontology_enrichment_celltype_v019=CL:0000349;2.09e-21;19!CL:0002541;2.99e-07;3!CL:0002577;4.32e-07;3!CL:0002537;5.01e-07;5!CL:0002564;9.89e-07;3 | ||
|ontology_enrichment_celltype_v019_2=CL:0000349,2.25e-21,19;CL:0002541,3.06e-07,3;CL:0002577,4.16e-07,3;CL:0002537,6.00e-07,5 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005631!2.88e-14!14;UBERON:0000158!2.88e-14!14;UBERON:0000478!1.97e-12!24;UBERON:0000481!1.36e-09!347;UBERON:0004119!2.08e-08!169;UBERON:0000925!2.08e-08!169;UBERON:0006595!2.08e-08!169;UBERON:0003124!3.39e-08!7;UBERON:0000468!4.80e-08!659;UBERON:0000305!1.08e-07!7;UBERON:0000922!1.54e-07!612 | |ontology_enrichment_uberon=UBERON:0005631!2.88e-14!14;UBERON:0000158!2.88e-14!14;UBERON:0000478!1.97e-12!24;UBERON:0000481!1.36e-09!347;UBERON:0004119!2.08e-08!169;UBERON:0000925!2.08e-08!169;UBERON:0006595!2.08e-08!169;UBERON:0003124!3.39e-08!7;UBERON:0000468!4.80e-08!659;UBERON:0000305!1.08e-07!7;UBERON:0000922!1.54e-07!612 | ||
|ontology_enrichment_uberon_v019=UBERON:0000478;3.20e-21;24!UBERON:0005631;3.48e-16;10!UBERON:0000158;3.48e-16;10!UBERON:0000305;1.05e-10;7!UBERON:0000922;5.82e-10;49!UBERON:0001987;6.57e-09;4!UBERON:0002107;1.91e-08;19!UBERON:0006925;1.91e-08;19!UBERON:0003124;2.99e-07;3!UBERON:0000920;2.99e-07;3!UBERON:0002242;9.89e-07;3 | |ontology_enrichment_uberon_v019=UBERON:0000478;3.20e-21;24!UBERON:0005631;3.48e-16;10!UBERON:0000158;3.48e-16;10!UBERON:0000305;1.05e-10;7!UBERON:0000922;5.82e-10;49!UBERON:0001987;6.57e-09;4!UBERON:0002107;1.91e-08;19!UBERON:0006925;1.91e-08;19!UBERON:0003124;2.99e-07;3!UBERON:0000920;2.99e-07;3!UBERON:0002242;9.89e-07;3 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,2.69e-23,14;UBERON:0000158,2.69e-23,14;UBERON:0000478,3.43e-21,24;UBERON:0003124,1.69e-14,7;UBERON:0000305,1.27e-10,7;UBERON:0004871,3.56e-09,8;UBERON:0001987,6.33e-09,4;UBERON:0004340,6.33e-09,4;UBERON:0002107,1.93e-08,19;UBERON:0006925,1.93e-08,19;UBERON:0008836,1.93e-08,19;UBERON:0000920,3.06e-07,3;UBERON:0008835,5.38e-07,22;UBERON:0003894,5.38e-07,22 | |||
|phase1_expression=0.726713517082227,0.214100523890983,0,0,0.893922188854576,2.61701557230111,0,0,0.261185628199839,0,0.697801167972428,14.6355719327215,30.8607364527291,0.990130823680373,2.65117900582333,0,0,0,0,0.123121058076788,4.08001382488506,2.19418305034661,0,0,0,0,0,0,0,0,0.464448369948228,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.31754430337318,0,0,0.0945348171640679,0.443458794925128,0.087834785693126,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.81014194788176,0,0,0,0,0,0.183201743930407,0,0,0.436094052142534,0,0,0,0,0,0,0,0,0,0,0,0.454072282934794,1.72852777344,0,0,0,0.149448680551801,0,0,0,0,0.368502951935304,0,2.37600571456411,3.70900393917835,0,0,0,0,0,0,0,0.751190294532984,0,0,0,0,0,0,0,0,0,0,0,0,0.969876340912871,0,0,0,0,0,0,0,0.132529768321485,1.04574548582567,0.310983165046111,0.756962552626885,0,0,0,0,3.71494342425583,0,0,0,0,0,0,0,0,0,0,0,0,0,1.47008711385542,0,3.9313088667105,4.13552934676983,0,9.47010976781974,0,0,0,0,0.648119116109707,0,0,0,0.115930404975077,0.117408694235822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.1798003441664,0.07333828582095,0,0,0,0.797814349754612,1.04007436911366,0.771622122786426,1.41849132023278,0.266422179016099,2.57360388584666,14.1081617401775,1.64648067356154,0,0.355391948742546,2.37585561880029,0,0,0,0,0,0,0,0,0,0.434343920002738,2.05476322550383,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,4.2942022101699,17.005797716029,2.17012018959788,1.45579603071565,2.67643483195743,1.10391690523754,2.57711112983969,0,0,1.03473071292505,0,0.184369168541703,0,26.6289574149327,77.5504137812534,0,0,0,4.24378600024763,9.98612637062982,34.7748837329132,0.496215615637554,0.460385919864187,0.280660094433074,0,0,0.804269605718038,0,0,0,0,0,0,10.2730532152879,0.40101294060657,0.184161977871793,0.918515585316854,0.364182336013434,1.44236856455367,0,0.539107359730903,0,0,0.211103257785751,0,0.170093705276516,0.431831832204279,0,0.812839312631559,2.50844886927427,0,0,0,0.219259876645935,0.261435451024901,0,0,0,1.54561517471583,0,0,0,0,0,0.676695028044854,0,0.460511024178389,0.964856007391714,0,0.290033387828457,0.852266274161009,19.8541439492224,0.495854746082934,0.960950336825531,0.127612712494584,0.6069466851333,0,0,0,0,0,0,0,0,1.48863347743867,0.632758849437452,1.14378116354295,0.255897791311334,1.28381696410176,0,0,0.899362287916574,0.54907405947211,0.706874414074119,0,0,0,2.92580243453754,0,0,3.95849743083159,0.141405431953713,0,0,0,0,0,0,0,0,0,0.717056761020258,0.88424136911809,0,0,0,0.329294892959902,0,1.39973888097993,0.288666338176536,0,0,2.07116361708914,0.43050537267123,0,1.33029046061003,1.60806380144872,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.852408440419239,39.3928399817189,15.1451987224646,40.8523733791979,0,0,0,0,2.11125408127993,1.19548792950642,0,0,0,0,0,0,0,0,0.197286811273867,0,0,0.969332746095218,0.185536196323703,0,0,0,1.44999915086959,0,0,0,0.344743373241465,0,0,0,0.120596438625408,0,0.221158519862449,0,0,0,0,0.846452843541768,0,0.922255617552241,0,0,63.481230786652,2.38153742844842,127.395311468454,0,0,0,0,0,0,0,0,0,0,0.989471500037586,0,0,0,2.4441205797345,0,0.123563938946503,0,0.067401132980677,25.6824847135612,0,0,0,0,0.789168805698781,29.0377718516793,1.22429104652196,1.01098527405581,0,0,0,0,0,0,0,0,0,0,0,2.44617335538842,0,0,0,0,0,0.176512253383001,11.9769792613682,0,0,0,0.391102765469606,0,0.213452994739353,24.576581978602,0,0,56.7979442923103,0,0,0,0,0,0.203996435272644,0,0,0,0,0,0,0.558564802544508,1.3749625440701,0,0.798716001995964,0.858452096273142,0,2.75452237195578,0,0,12.7628755337702,9.23057613869064,8.82986424489822,5.51193896482593,0,0,0,0,0,0,0,0,0,0,0.236417121897595,0.786818822024972,0.211200673038813,0,0,5.00286728461357,0.662091970365432,0,0,0,0,0,0,0,0.79318464064088,1.02586563574658,60.9531688996218,0.646414781807753,0.13223260174269,0,0,0,0.314408610199332,1.24271716604159,0,0,0,0,0,0,0,0,0,0,0,0.1251909307065,2.29363678276028,0.110929051536852,0.18628920882415,0,0.124980407962107,0,0,0.470531639396343,0,0,0,0,0,0,0.251567901752575,0,0,0.151230923763239,0,0,0,0,0.310525913752519,0,0,0.521745061811734,0,0,0,0,0,0,0.796191777397232,10.8007496459051,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192914038270915,0.168942440653073,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.622077260032973,0,0,0,0.764467467344097,0,0,0.123935764259002,0,0,0,0,1.76337971845342,0,0,0,0,0.205116364240755,0.756215088665154,0,0.484426936895553,0,0,0,0,0,0,0,1.79024599904647,0.676892955143315,0,0,0,0,0,0.202612753855184,0,0,0.19024743058172,3.82882366312754,0,0.496211178389294,0,0,0,0.672567444437648,2.42786241694653,0.227662191351298,10.6442844195167,0,0,0.0679697329768317,0.131545547125698,0,0,0.313972371402056,0,2.5224494698241,10.0447459256045,0,0,1.92986669276972,0,0,13.7348035119038,0.801711364730253,0,0,0,0,0,0,0,0.22910686854405,0,0,0,0,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| ||
|short_description=p29@IGF2 | |short_description=p29@IGF2 | ||
}} | }} |
Latest revision as of 07:40, 17 September 2015
Short description: | p29@IGF2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_29_at_IGF2_5end |
Coexpression cluster: | C172_chorionic_skeletal_tongue_amniotic_liver_gastrointestinal_Pericytes |
Association with transcript: | -24bp_to_AK074614_5end |
EntrezGene: | IGF2 |
HGNC: | 5466 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
extraembryonic cell | 2.25e-21 | 19 |
chorionic membrane mesenchymal stem cell | 3.06e-07 | 3 |
placental epithelial cell | 4.16e-07 | 3 |
amnion mesenchymal stem cell | 6.00e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 2.69e-23 | 14 |
membranous layer | 2.69e-23 | 14 |
extraembryonic structure | 3.43e-21 | 24 |
chorion | 1.69e-14 | 7 |
amnion | 1.27e-10 | 7 |
somatic layer of lateral plate mesoderm | 3.56e-09 | 8 |
placenta | 6.33e-09 | 4 |
allantois | 6.33e-09 | 4 |
liver | 1.93e-08 | 19 |
digestive gland | 1.93e-08 | 19 |
liver bud | 1.93e-08 | 19 |
egg chorion | 3.06e-07 | 3 |
hepatic diverticulum | 5.38e-07 | 22 |
liver primordium | 5.38e-07 | 22 |