FFCP PHASE1:Hg19::chr1:236917218..236917230,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr1:236917218..236917230,+
|short_description=p8@ACTN2
|description=CAGE_peak_8_at_ACTN2_5end
|association_with_transcript=19bp_to_ENST00000461367_5end
|Entre...") |
No edit summary |
||
(11 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=88 | |EntrezGene=88 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=164 | |HGNC=164 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=19bp_to_ENST00000461367_5end | |||
|cluster_id=chr1:236917218..236917230,+ | |||
|coexpression_cluster_id=C3136 | |||
|description=CAGE_peak_8_at_ACTN2_5end | |||
|id=chr1:236917218..236917230,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001950!2.42e-50!20;UBERON:0001049!8.42e-50!57;UBERON:0005068!8.42e-50!57;UBERON:0006241!8.42e-50!57;UBERON:0007135!8.42e-50!57;UBERON:0002616!5.33e-48!59;UBERON:0002619!9.46e-46!22;UBERON:0000955!6.10e-44!69;UBERON:0006238!6.10e-44!69;UBERON:0002346!2.30e-43!90;UBERON:0003075!6.45e-42!86;UBERON:0007284!6.45e-42!86;UBERON:0001869!9.82e-42!32;UBERON:0000956!3.48e-40!25;UBERON:0000203!3.48e-40!25;UBERON:0001017!6.29e-40!82;UBERON:0000200!3.25e-39!6;UBERON:0001893!3.52e-39!34;UBERON:0002020!5.34e-39!34;UBERON:0003528!5.34e-39!34;UBERON:0005743!6.61e-38!86;UBERON:0002780!1.42e-36!41;UBERON:0001890!1.42e-36!41;UBERON:0006240!1.42e-36!41;UBERON:0007023!3.00e-36!115;UBERON:0003080!1.19e-35!42;UBERON:0002791!5.82e-35!33;UBERON:0000073!5.76e-34!94;UBERON:0001016!5.76e-34!94;UBERON:0000033!2.69e-25!123;UBERON:0000153!6.30e-24!129;UBERON:0007811!6.30e-24!129;UBERON:0003056!9.75e-24!61;UBERON:0000924!5.23e-22!173;UBERON:0006601!5.23e-22!173;UBERON:0001872!1.94e-21!5;UBERON:0004121!9.83e-21!169;UBERON:0002771!4.12e-20!3;UBERON:0004733!1.08e-18!12;UBERON:0002028!1.08e-18!12;UBERON:0007277!1.08e-18!12;UBERON:0004732!3.21e-17!13;UBERON:0003076!7.35e-15!15;UBERON:0003057!7.35e-15!15;UBERON:0000025!1.43e-14!194;UBERON:0001870!1.44e-14!2;UBERON:0001871!3.00e-13!7;UBERON:0002298!4.26e-13!8;UBERON:0002680!9.31e-12!9;UBERON:0001895!9.31e-12!9;UBERON:0010092!9.31e-12!9;UBERON:0000064!3.66e-11!219;UBERON:0004111!7.90e-11!241;UBERON:0000988!7.15e-10!3;UBERON:0003978!1.02e-09!3;UBERON:0009751!1.02e-09!3;UBERON:0000946!1.02e-09!3;UBERON:0002523!1.02e-09!3;UBERON:0005983!1.02e-09!3;UBERON:0002165!1.02e-09!3;UBERON:0002062!1.02e-09!3;UBERON:0007280!1.02e-09!3;UBERON:0000477!2.34e-09!286;UBERON:0001896!3.10e-09!3;UBERON:0005290!3.10e-09!3;UBERON:0010096!3.10e-09!3;UBERON:0000483!2.59e-08!309;UBERON:0002702!2.89e-08!1;UBERON:0007190!3.32e-08!1;UBERON:0000119!3.46e-08!312;UBERON:0002902!3.55e-08!1;UBERON:0009899!3.55e-08!1;UBERON:0002146!4.99e-08!1;UBERON:0005623!4.99e-08!1;UBERON:0002022!5.70e-08!1;UBERON:0002581!6.97e-08!1;UBERON:0002135!8.51e-08!1;UBERON:0001882!1.35e-07!1;UBERON:0005403!1.35e-07!1;UBERON:0003112!1.54e-07!1;UBERON:0000032!1.54e-07!1;UBERON:0005253!1.54e-07!1;UBERON:0003128!1.54e-07!1;UBERON:0002241!1.54e-07!1;UBERON:0001703!1.54e-07!1;UBERON:0004761!1.54e-07!1;UBERON:0009617!1.54e-07!1;UBERON:0000481!8.03e-07!347 | |||
|ontology_enrichment_uberon_v019=UBERON:0002702;5.96e-34;2!UBERON:0000988;2.62e-23;3!UBERON:0001870;3.66e-23;3!UBERON:0001872;1.71e-14;5!UBERON:0001950;1.16e-13;20!UBERON:0002619;1.41e-12;22!UBERON:0002298;2.19e-12;6!UBERON:0000200;2.59e-12;6!UBERON:0000956;2.91e-11;25!UBERON:0000203;2.91e-11;25!UBERON:0000073;2.48e-10;53!UBERON:0002616;2.48e-10;53!UBERON:0003528;6.52e-10;34!UBERON:0002020;6.52e-10;34!UBERON:0001869;6.52e-10;32!UBERON:0002680;1.04e-08;9!UBERON:0001895;1.04e-08;9!UBERON:0002791;1.30e-08;32!UBERON:0001893;1.30e-08;34!UBERON:0004733;7.48e-07;12!UBERON:0002028;7.48e-07;12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002702,5.04e-34,2;UBERON:0000988,2.62e-23,3;UBERON:0001870,3.27e-23,3;UBERON:0001872,1.83e-14,5;UBERON:0001950,1.16e-13,20;UBERON:0002619,1.41e-12,22;UBERON:0002298,2.19e-12,6;UBERON:0000200,2.45e-12,6;UBERON:0000073,4.68e-12,53;UBERON:0002616,4.68e-12,53;UBERON:0001049,1.77e-11,56;UBERON:0005068,1.77e-11,56;UBERON:0006241,1.77e-11,56;UBERON:0007135,1.77e-11,56;UBERON:0000956,2.91e-11,25;UBERON:0000203,2.91e-11,25;UBERON:0000955,1.53e-09,68;UBERON:0006238,1.53e-09,68;UBERON:0002791,4.11e-09,32;UBERON:0001869,4.11e-09,32;UBERON:0002680,1.04e-08,9;UBERON:0001895,1.04e-08,9;UBERON:0010092,1.04e-08,9;UBERON:0003528,1.18e-08,34;UBERON:0002020,1.18e-08,34;UBERON:0001893,1.18e-08,34;UBERON:0001017,3.31e-08,81;UBERON:0003075,3.31e-08,82;UBERON:0007284,3.31e-08,82;UBERON:0002346,7.10e-08,86;UBERON:0001016,1.68e-07,89;UBERON:0002780,2.17e-07,41;UBERON:0001890,2.17e-07,41;UBERON:0003080,2.17e-07,41;UBERON:0006240,2.17e-07,41;UBERON:0004733,7.48e-07,12;UBERON:0002028,7.48e-07,12;UBERON:0007277,7.48e-07,12 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.542621605391443,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.463840490809256,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110579259931225,0.295547618953547,0.219385397153973,0,0,0,0,0,0.538545866458633,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.443175571691151,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279282401272254,0.458320848023367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425246896606173,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258565912723101,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.77213635993397,0.244052529803926,0.3755727921195,0,0.110929051536852,0.18628920882415,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414775308455192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.212574920101683,0,0,0,0,0,0,0,0.192687675289379,0,0,0.205116364240755,0,0.622415272177961,0.161475645631851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.742913430802341,1.56215619722769,0.206686796501184,0.570742291745161,0,0,0,0,0,0,0,0,0,0,0,0,2.24300118823545,0.394636641377094,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.407948941145488,0,0,0,0,0,0,0.109265571963696,0,0,0,0,0,0,0,0,0.103432995861895,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.542621605391443,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.463840490809256,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110579259931225,0.295547618953547,0.219385397153973,0,0,0,0,0,0.538545866458633,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.443175571691151,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279282401272254,0.458320848023367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425246896606173,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258565912723101,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.77213635993397,0.244052529803926,0.3755727921195,0,0.110929051536852,0.18628920882415,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414775308455192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.212574920101683,0,0,0,0,0,0,0,0.192687675289379,0,0,0.205116364240755,0,0.622415272177961,0.161475645631851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.742913430802341,1.56215619722769,0.206686796501184,0.570742291745161,0,0,0,0,0,0,0,0,0,0,0,0,2.24300118823545,0.394636641377094,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.407948941145488,0,0,0,0,0,0,0.109265571963696,0,0,0,0,0,0,0,0,0.103432995861895,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p8@ACTN2 | |||
}} | }} |
Latest revision as of 14:49, 16 September 2015
Short description: | p8@ACTN2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_ACTN2_5end |
Coexpression cluster: | C3136_medial_pons_parietal_amygdala_paracentral_brain_frontal |
Association with transcript: | 19bp_to_ENST00000461367_5end |
EntrezGene: | ACTN2 |
HGNC: | 164 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data