FFCP PHASE1:Hg19::chr1:236686445..236686452,+: Difference between revisions
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|id=chr1:236686445..236686452,+
|short_description=p18@LGALS8
|description=CAGE_peak_18_at_LGALS8_5end
|association_with_transcript=-286bp_to_ENST00000341872,ENST00...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=3964 | |EntrezGene=3964 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6569 | |HGNC=6569 | ||
|TSSclassifier=strong | |||
|UniProt=O00214 | |UniProt=O00214 | ||
|association_with_transcript=-286bp_to_ENST00000341872,ENST00000450372,NM_006499,NM_201543,uc001hxy.1,uc001hxz.1,uc009xgg.1_5end | |||
|cluster_id=chr1:236686445..236686452,+ | |||
|coexpression_cluster_id=C108 | |||
|description=CAGE_peak_18_at_LGALS8_5end | |||
|id=chr1:236686445..236686452,+ | |||
|ontology_enrichment_celltype=CL:0000540!1.36e-10!6;CL:0000031!1.36e-10!6;CL:0000404!1.36e-10!6;CL:0002535!1.39e-08!2;CL:0000047!3.63e-08!8 | |||
|ontology_enrichment_celltype_v019=CL:0002327;3.10e-50;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0002327,3.10e-50,4 | |||
|ontology_enrichment_development_v019=UBERON:0008425;5.42e-195;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:5093;3.10e-50;4!DOID:1612;3.10e-50;4 | |||
|ontology_enrichment_disease_v019_2=DOID:5093,3.10e-50,4;DOID:1612,3.10e-50,4 | |||
|ontology_enrichment_uberon=UBERON:0003929!3.67e-09!54;UBERON:0006955!1.39e-08!2;UBERON:0004801!1.39e-08!2;UBERON:0002530!2.09e-08!59;UBERON:0002365!1.29e-07!31;UBERON:0002330!1.29e-07!31;UBERON:0002107!2.89e-07!19;UBERON:0006925!2.89e-07!19;UBERON:0008836!2.89e-07!19 | |||
|ontology_enrichment_uberon_v019=UBERON:0001911;3.10e-50;4!UBERON:0000310;3.81e-21;10!UBERON:0001443;2.25e-19;11!UBERON:0002365;4.53e-08;31!UBERON:0002330;4.53e-08;31 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001911,3.10e-50,4;UBERON:0005333,3.10e-50,4;UBERON:0008425,3.10e-50,4;UBERON:0005311,3.10e-50,4;UBERON:0000076,5.22e-26,8;UBERON:0000310,3.81e-21,10;UBERON:0001443,2.25e-19,11;UBERON:0002365,7.41e-08,31;UBERON:0005085,7.41e-08,31;UBERON:0002330,7.41e-08,31;UBERON:0005153,8.21e-07,37 | |||
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|short_description=p18@LGALS8 | |||
}} | }} |
Latest revision as of 14:17, 16 September 2015
Short description: | p18@LGALS8 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_18_at_LGALS8_5end |
Coexpression cluster: | C108_breast_hepatoblastoma_MCF7_parotid_salivary_submaxillary_prostate |
Association with transcript: | -286bp_to_ENST00000341872, ENST00000450372, NM_006499, NM_201543, uc001hxy.1, uc001hxz.1, uc009xgg.1_5end |
EntrezGene: | LGALS8 |
HGNC: | 6569 |
UniProt: | O00214 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mammary gland epithelial cell | 3.10e-50 | 4 |
Ontology term | p-value | n |
---|---|---|
mammary gland | 3.10e-50 | 4 |
mammary bud | 3.10e-50 | 4 |
mammary ridge | 3.10e-50 | 4 |
mammary placode | 3.10e-50 | 4 |
external ectoderm | 5.22e-26 | 8 |
breast | 3.81e-21 | 10 |
chest | 2.25e-19 | 11 |
exocrine gland | 7.41e-08 | 31 |
ectodermal placode | 7.41e-08 | 31 |
exocrine system | 7.41e-08 | 31 |
epithelial bud | 8.21e-07 | 37 |
Ontology term | p-value | n |
---|---|---|
thoracic cancer | 3.10e-50 | 4 |
breast cancer | 3.10e-50 | 4 |