FFCP PHASE1:Hg19::chr17:39658661..39658672,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3860 | |EntrezGene=3860 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6415 | |HGNC=6415 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-498bp_to_ENST00000475217_5end | |association_with_transcript=-498bp_to_ENST00000475217_5end | ||
|cluster_id=chr17:39658661..39658672,- | |||
|coexpression_cluster_id=C60 | |coexpression_cluster_id=C60 | ||
|description=CAGE_peak_11_at_KRT13_5end | |description=CAGE_peak_11_at_KRT13_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0002621!2.38e-12!3 | |ontology_enrichment_celltype=CL:0002621!2.38e-12!3 | ||
|ontology_enrichment_celltype_v019= | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0009143;2.16e-26;1!UBERON:0008814;8.82e-14;2!UBERON:0010056;8.82e-14;2 | |ontology_enrichment_development_v019=UBERON:0009143;2.16e-26;1!UBERON:0008814;8.82e-14;2!UBERON:0010056;8.82e-14;2 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019_2=UBERON:0001723,6.51e-34,3;UBERON:0001033,6.51e-34,3;UBERON:0010056,6.51e-34,3;UBERON:0002372,9.79e-26,1;UBERON:0001961,9.79e-26,1;UBERON:0001744,9.79e-26,1;UBERON:0001735,9.79e-26,1;UBERON:0001042,6.92e-23,10;UBERON:0009145,6.92e-23,10;UBERON:0006562,7.00e-21,11;UBERON:0000002,2.58e-17,6;UBERON:0001560,2.58e-17,6;UBERON:0000341,7.30e-14,2;UBERON:0001557,2.07e-12,19;UBERON:0000166,8.20e-11,22;UBERON:0005795,9.07e-11,22;UBERON:0001043,1.01e-09,3;UBERON:0009143,1.01e-09,3;UBERON:0000165,2.33e-08,29;UBERON:0000930,2.33e-08,29;UBERON:0000161,7.52e-07,36;UBERON:0000153,8.00e-07,62;UBERON:0007811,8.00e-07,62 | |||
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|short_description=p11@KRT13 | |short_description=p11@KRT13 | ||
}} | }} |
Latest revision as of 05:14, 20 September 2015
Short description: | p11@KRT13 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_11_at_KRT13_5end |
Coexpression cluster: | C60_esophagus_tonsil_throat_tongue_uterus_cervix_cervical |
Association with transcript: | -498bp_to_ENST00000475217_5end |
EntrezGene: | KRT13 |
HGNC: | 6415 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
tongue | 6.51e-34 | 3 |
gustatory system | 6.51e-34 | 3 |
future tongue | 6.51e-34 | 3 |
tonsil | 9.79e-26 | 1 |
mucosa-associated lymphoid tissue | 9.79e-26 | 1 |
lymphoid tissue | 9.79e-26 | 1 |
tonsillar ring | 9.79e-26 | 1 |
chordate pharynx | 6.92e-23 | 10 |
pharyngeal region of foregut | 6.92e-23 | 10 |
pharynx | 7.00e-21 | 11 |
uterine cervix | 2.58e-17 | 6 |
neck of organ | 2.58e-17 | 6 |
throat | 7.30e-14 | 2 |
upper respiratory tract | 2.07e-12 | 19 |
oral opening | 8.20e-11 | 22 |
embryonic uterus | 9.07e-11 | 22 |
esophagus | 1.01e-09 | 3 |
esophageal region | 1.01e-09 | 3 |
mouth | 2.33e-08 | 29 |
stomodeum | 2.33e-08 | 29 |
orifice | 7.52e-07 | 36 |
anterior region of body | 8.00e-07 | 62 |
craniocervical region | 8.00e-07 | 62 |