FFCP PHASE1:Hg19::chr17:18330170..18330180,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt=C9JH30 | |UniProt=C9JH30 | ||
|association_with_transcript=0bp_to_ENST00000326333,uc010vxz.1_5end | |association_with_transcript=0bp_to_ENST00000326333,uc010vxz.1_5end | ||
|cluster_id=chr17:18330170..18330180,+ | |||
|coexpression_cluster_id=C2397 | |coexpression_cluster_id=C2397 | ||
|description=CAGE_peak_1_at_ENST00000326333_5end,CAGE_peak_1_at_uc010vxz.1_5end | |description=CAGE_peak_1_at_ENST00000326333_5end,CAGE_peak_1_at_uc010vxz.1_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0002166!3.11e-15!3;CL:0001014!6.40e-10!2;CL:0001016!6.40e-10!2;CL:0002541!4.39e-07!3 | |ontology_enrichment_celltype=CL:0002166!3.11e-15!3;CL:0001014!6.40e-10!2;CL:0001016!6.40e-10!2;CL:0002541!4.39e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0002166;8.90e-17;3!CL:0000197;4.94e-09;6!CL:0000098;4.94e-09;6!CL:0002167;4.94e-09;6 | |ontology_enrichment_celltype_v019=CL:0002166;8.90e-17;3!CL:0000197;4.94e-09;6!CL:0000098;4.94e-09;6!CL:0002167;4.94e-09;6 | ||
|ontology_enrichment_celltype_v019_2=CL:0002166,9.26e-17,3;CL:0000197,4.94e-09,6;CL:0000098,4.94e-09,6;CL:0002167,4.94e-09,6;CL:0000066,3.31e-07,253 | |||
|ontology_enrichment_development_v019=UBERON:0008947;2.97e-31;29 | |ontology_enrichment_development_v019=UBERON:0008947;2.97e-31;29 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2=DOID:305,8.50e-08,106 | |||
|ontology_enrichment_uberon=UBERON:0001737!4.07e-42!9;UBERON:0001557!2.93e-23!19;UBERON:0001708!1.53e-11!4;UBERON:0001704!1.53e-11!4;UBERON:0008947!1.06e-10!38;UBERON:0003258!1.06e-10!38;UBERON:0000065!2.14e-10!53;UBERON:0000072!3.03e-10!46;UBERON:0001004!2.80e-08!72;UBERON:0002090!7.85e-08!6;UBERON:0000476!4.39e-07!3;UBERON:0000920!4.39e-07!3 | |ontology_enrichment_uberon=UBERON:0001737!4.07e-42!9;UBERON:0001557!2.93e-23!19;UBERON:0001708!1.53e-11!4;UBERON:0001704!1.53e-11!4;UBERON:0008947!1.06e-10!38;UBERON:0003258!1.06e-10!38;UBERON:0000065!2.14e-10!53;UBERON:0000072!3.03e-10!46;UBERON:0001004!2.80e-08!72;UBERON:0002090!7.85e-08!6;UBERON:0000476!4.39e-07!3;UBERON:0000920!4.39e-07!3 | ||
|ontology_enrichment_uberon_v019=UBERON:0001737;1.69e-102;9!UBERON:0001557;1.69e-102;9!UBERON:0000065;1.10e-23;44!UBERON:0000072;1.08e-22;37!UBERON:0001708;7.93e-13;4!UBERON:0008895;7.93e-13;4!UBERON:0001004;3.45e-12;65!UBERON:0011159;1.90e-10;5 | |ontology_enrichment_uberon_v019=UBERON:0001737;1.69e-102;9!UBERON:0001557;1.69e-102;9!UBERON:0000065;1.10e-23;44!UBERON:0000072;1.08e-22;37!UBERON:0001708;7.93e-13;4!UBERON:0008895;7.93e-13;4!UBERON:0001004;3.45e-12;65!UBERON:0011159;1.90e-10;5 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,1.70e-102,9;UBERON:0001557,3.72e-48,19;UBERON:0008947,1.25e-23,38;UBERON:0003258,1.25e-23,38;UBERON:0000065,2.85e-20,54;UBERON:0000072,6.41e-19,47;UBERON:0001004,1.83e-14,74;UBERON:0001708,8.17e-13,4;UBERON:0008895,8.17e-13,4;UBERON:0011159,1.95e-10,5;UBERON:0001041,9.69e-10,87;UBERON:0010188,7.62e-09,6;UBERON:0002539,7.62e-09,6;UBERON:0008816,7.62e-09,6;UBERON:0004921,8.00e-07,118 | |||
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|short_description=p1@ENST00000326333,p1@uc010vxz.1 | |short_description=p1@ENST00000326333,p1@uc010vxz.1 | ||
}} | }} |
Latest revision as of 23:08, 18 September 2015
Short description: | p1@ENST00000326333, p1@uc010vxz.1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ENST00000326333_5end, CAGE_peak_1_at_uc010vxz.1_5end |
Coexpression cluster: | C2397_nasal_immature_Hep2_Mallassezderived_Small_amniotic_acute |
Association with transcript: | 0bp_to_ENST00000326333, uc010vxz.1_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of Malassez | 9.26e-17 | 3 |
receptor cell | 4.94e-09 | 6 |
sensory epithelial cell | 4.94e-09 | 6 |
olfactory epithelial cell | 4.94e-09 | 6 |
epithelial cell | 3.31e-07 | 253 |
Ontology term | p-value | n |
---|---|---|
larynx | 1.70e-102 | 9 |
upper respiratory tract | 3.72e-48 | 19 |
respiratory primordium | 1.25e-23 | 38 |
endoderm of foregut | 1.25e-23 | 38 |
respiratory tract | 2.85e-20 | 54 |
segment of respiratory tract | 6.41e-19 | 47 |
respiratory system | 1.83e-14 | 74 |
jaw skeleton | 8.17e-13 | 4 |
splanchnocranium | 8.17e-13 | 4 |
primary subdivision of cranial skeletal system | 1.95e-10 | 5 |
foregut | 9.69e-10 | 87 |
protuberance | 7.62e-09 | 6 |
pharyngeal arch | 7.62e-09 | 6 |
embryonic head | 7.62e-09 | 6 |
subdivision of digestive tract | 8.00e-07 | 118 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 8.50e-08 | 106 |