FFCP PHASE1:Hg19::chr6:56484616..56484636,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr6:56484616..56484636,- | |||
|coexpression_cluster_id=C457 | |coexpression_cluster_id=C457 | ||
|description=CAGE_peak_at_chr6:56484616..56484636,- | |description=CAGE_peak_at_chr6:56484616..56484636,- | ||
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|ontology_enrichment_celltype=CL:0000223!6.97e-13!59;CL:0002076!1.49e-12!43;CL:0002251!7.23e-10!21;CL:0000066!1.60e-09!254 | |ontology_enrichment_celltype=CL:0000223!6.97e-13!59;CL:0002076!1.49e-12!43;CL:0002251!7.23e-10!21;CL:0000066!1.60e-09!254 | ||
|ontology_enrichment_celltype_v019=CL:0002623;5.77e-22;3!CL:0002076;1.04e-21;42!CL:0002251;1.67e-16;20!CL:0000622;2.08e-13;5!CL:0000154;2.93e-11;6!CL:0002231;1.47e-10;3!CL:0002166;6.21e-10;3!CL:0002336;1.63e-08;1!CL:0002261;1.63e-08;1!CL:0002170;1.63e-08;1!CL:0002327;7.06e-08;4!CL:0000150;1.17e-07;9 | |ontology_enrichment_celltype_v019=CL:0002623;5.77e-22;3!CL:0002076;1.04e-21;42!CL:0002251;1.67e-16;20!CL:0000622;2.08e-13;5!CL:0000154;2.93e-11;6!CL:0002231;1.47e-10;3!CL:0002166;6.21e-10;3!CL:0002336;1.63e-08;1!CL:0002261;1.63e-08;1!CL:0002170;1.63e-08;1!CL:0002327;7.06e-08;4!CL:0000150;1.17e-07;9 | ||
|ontology_enrichment_celltype_v019_2=CL:0002076,7.59e-26,42;CL:0002623,6.66e-22,3;CL:0000223,5.84e-21,58;CL:0002251,1.56e-16,20;CL:0000622,2.26e-13,5;CL:0000066,1.07e-12,253;CL:0000154,3.14e-11,6;CL:0002231,1.62e-10,3;CL:0002166,5.94e-10,3;CL:0002336,1.63e-08,1;CL:0002261,1.63e-08,1;CL:0002170,1.63e-08,1;CL:0002327,6.94e-08,4;CL:0000150,1.22e-07,9 | |||
|ontology_enrichment_development_v019=CL:0000223;9.63e-11;58 | |ontology_enrichment_development_v019=CL:0000223;9.63e-11;58 | ||
|ontology_enrichment_disease=DOID:305!4.49e-11!106;DOID:1749!7.46e-09!14;DOID:0050687!3.54e-07!143 | |ontology_enrichment_disease=DOID:305!4.49e-11!106;DOID:1749!7.46e-09!14;DOID:0050687!3.54e-07!143 | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004119!5.53e-09!169;UBERON:0000925!5.53e-09!169;UBERON:0006595!5.53e-09!169;UBERON:0000033!6.96e-09!123;UBERON:0004121!9.26e-09!169;UBERON:0000153!2.91e-08!129;UBERON:0007811!2.91e-08!129;UBERON:0000924!3.47e-08!173;UBERON:0006601!3.47e-08!173;UBERON:0000166!1.83e-07!21;UBERON:0001004!2.24e-07!72;UBERON:0001007!4.62e-07!155;UBERON:0001555!4.62e-07!155;UBERON:0007026!4.62e-07!155;UBERON:0003729!6.46e-07!5 | |ontology_enrichment_uberon=UBERON:0004119!5.53e-09!169;UBERON:0000925!5.53e-09!169;UBERON:0006595!5.53e-09!169;UBERON:0000033!6.96e-09!123;UBERON:0004121!9.26e-09!169;UBERON:0000153!2.91e-08!129;UBERON:0007811!2.91e-08!129;UBERON:0000924!3.47e-08!173;UBERON:0006601!3.47e-08!173;UBERON:0000166!1.83e-07!21;UBERON:0001004!2.24e-07!72;UBERON:0001007!4.62e-07!155;UBERON:0001555!4.62e-07!155;UBERON:0007026!4.62e-07!155;UBERON:0003729!6.46e-07!5 | ||
|ontology_enrichment_uberon_v019=UBERON:0001044;2.93e-11;6!UBERON:0003293;2.93e-11;6!UBERON:0003294;2.93e-11;6!UBERON:0010047;2.93e-11;6!UBERON:0003408;2.93e-11;6!UBERON:0000167;2.93e-11;6!UBERON:0000161;3.27e-09;19!UBERON:0000166;3.27e-09;19!UBERON:0000165;1.17e-08;28!UBERON:0001911;7.06e-08;4!UBERON:0001708;1.16e-07;4!UBERON:0008895;1.16e-07;4!UBERON:0002365;1.17e-07;31!UBERON:0002330;1.17e-07;31 | |ontology_enrichment_uberon_v019=UBERON:0001044;2.93e-11;6!UBERON:0003293;2.93e-11;6!UBERON:0003294;2.93e-11;6!UBERON:0010047;2.93e-11;6!UBERON:0003408;2.93e-11;6!UBERON:0000167;2.93e-11;6!UBERON:0000161;3.27e-09;19!UBERON:0000166;3.27e-09;19!UBERON:0000165;1.17e-08;28!UBERON:0001911;7.06e-08;4!UBERON:0001708;1.16e-07;4!UBERON:0008895;1.16e-07;4!UBERON:0002365;1.17e-07;31!UBERON:0002330;1.17e-07;31 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001044,3.14e-11,6;UBERON:0003293,3.14e-11,6;UBERON:0003294,3.14e-11,6;UBERON:0010047,3.14e-11,6;UBERON:0000167,3.14e-11,6;UBERON:0000161,7.08e-09,36;UBERON:0000165,2.42e-08,29;UBERON:0000930,2.42e-08,29;UBERON:0000166,6.33e-08,22;UBERON:0001911,6.94e-08,4;UBERON:0005333,6.94e-08,4;UBERON:0008425,6.94e-08,4;UBERON:0005311,6.94e-08,4;UBERON:0001708,1.12e-07,4;UBERON:0008895,1.12e-07,4;UBERON:0002365,1.40e-07,31;UBERON:0002330,1.40e-07,31;UBERON:0003408,6.44e-07,10;UBERON:0000033,6.66e-07,56;UBERON:0004119,7.02e-07,160;UBERON:0000925,7.02e-07,160;UBERON:0006595,7.02e-07,160 | |||
|phase1_expression=0.181678379270557,0,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.572471974262113,0.273748850145768,0.125542639594803,0.0764134057479513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.145398238779565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150176892841506,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205601498999509,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0.486634870302636,0,0.665188192387692,0.087834785693126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.550236083880135,0,0,0,0.33472061276467,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12663051166458,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245668634623536,0,0,0,0,0,0.336672227908132,0,0,0,0,0,0,0,0.213557388818567,0,0,0,0.515281080091258,0,0.337552664482532,0,0.252433774244115,0,0,0,0,0,0,2.45471508531751,0.286804595389004,0.121973706129595,0.132529768321485,0,0,0,0,0,0,0,0,0,0.118306800039844,0,0,0,0,0.237270619111097,0.134831308160164,0,0,0,0,0,0,1.26755034821831,0,0.590789906681404,0,0,0,0.768251997860379,0,5.2275065654048,3.51836091602412,0,0,0,0,0,0,0,0,0,0,0,0,0.148631162288728,0,1.6798212819886,1.27597587518148,3.67189943081678,1.45316969256981,0.383382679165211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.10833939483032,0,0,0,0,0.410952645100767,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.356857977594324,0,0,0,0,0,0,0,0.173767228936166,0,0,0,0,0,0,1.66435439510497,0,0,0,0,0.128139149255701,0,0,0,0,0,0.0821271560138091,0,0,0,2.20557117333613,6.62983120338454,0,0.364182336013434,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.366277859273374,0.082509499920588,0,0,0,0,0,0,0,0,0.145016693914229,0.170453254832202,0.0890320356467374,2.97512847649761,0.768760269460425,1.65896526242959,4.95673126192195,0,0,0,0,0,0,0,0,0,0.316379424718726,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.577332676353072,0,0,0,0,0,0,3.21612760289743,0,0,0,0,0,0,0,0,0.106824071127473,0,0.735120647943095,0,0,0,0.159426272728822,0,0.191505370132367,0,0,0,0,0.156679895773023,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0.121360521749513,0,0.284136146806413,0,0.296964680832639,0.307160702099232,0,0.281338832821026,0.222617410045812,0,0,0,0,0.251932747854276,0,0.492339221844278,0.311039587661807,0.0898683511473268,0.179021174675609,0,0,0,0,0,0.0927680981618513,0,0.260427761085233,0,0,1.93448862085349,0.254253650292766,0.236387681767936,0,0,0,0,0.241192877250816,0,0.331737779793674,0.295547618953547,0,0,2.23077990845765,0.153900517007594,0,0,0,0,0.31900115973192,0,0,0,0,0,0,0,0,0,0,0,0.163232808159148,0.141353071433941,0,0,0,0.611030144933625,0,0,0.104421949505455,0,0,0.234264445725339,0,0.19566461893209,0.485560759068186,0,1.20990716048664,0,0,0,0,0,0,0,0,0,1.8027707491708,0,0.391969589657511,0.261177619741208,0,0.171986032471617,0.0967563312890851,0,0,0.0969890164884194,0,0.225980740780532,0.274083849293502,0.19871461170299,0.0633107959558787,0.195551382734803,0.0801588202515337,0,0.39961921916426,0,0.114536596165916,0.343189995723929,0,0.372757606696298,1.64985824231757,0.135904206073614,0.209205692624666,0,0,1.20084057741958,0.136905378891993,0,0.429765441419957,0,0.558564802544508,0.229160424011684,0.717873024576814,0.399358000997982,0,0,0,0,0,0,0.0824158583811665,0,0.393709926058995,0.0846733320657845,0,0.136203406111576,0.160753148465019,0.137539436597234,0,0,0,0,0.670869375198532,0,0,0,0.35857467866569,0.383830394638891,0,0,0,0,0,0,0,0.082092520749339,0,0,0,0,0.387848869084652,0.26446520348538,0,0,0.106787412567695,0,0,0,0.197611631897944,0,0,0,0,0,0,0,0,0.244052529803926,0.250381861413,0,0.221858103073705,0,0.138348634936231,0.37494122388632,0,0,0,0,0,0,0,0,0.189403005275089,0,0.889811221596536,0.228840068396924,0,0,0,0.159296767163702,0,0,0.414706207840855,0,0,0,0,0,0.181848659202559,0,0,0.398095888698616,0.800055529326307,0,0,0,0,0.214441591374926,0,0.226705925512272,0.463044948647668,0.244736704506468,0,0,0,0,0,0.168942440653073,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0,0.419638523158333,0,0,0,0,0,0,0,0,0,0,0,0,0,0.3062454773532,0,0,0.478901577171454,0,0,0,0.161475645631851,0,0.588886311006154,0.471878893390961,5.68628655417205,0.462102664601353,0,0,0,0.0752103283492573,0,0,0,0.327543835020193,0,0.0675375846183947,0.781078098613847,0,0,0,0.548257766857182,0.496211178389294,0,1.66091155931474,0,0.672567444437648,0,0,0,0.115233987555779,0.171488009437418,0.135939465953663,0,0.118193840883968,0,0,0.157115589916002,0,0,0,0,0,0,0.348724276104376,0,0,5.38762026823896,6.99945756085195,1.38251932362818,0,0.118332000730565,0.0852134047591577,0.423387050190929,0.22910686854405,0,0,0,0.098150233615243,0,0,0,0,0.485710993059139,0,0.397901550322736,0.118920090777569,0.11294608203896,0.219881033490858,0,0,0.218559560503957,1.41095188908457,0,0,0,0,0,0,0,0,0.299823467774787,2.32120120187355,0,0.240724100067505,0,0,0.143339583151451,0,0,0,0,0,0,0,0,0,0,0.203977659483963,0,0,0,0,0,0,0.310298987585686,0,0,0,0.0620747142958579,0,0,0,0.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| ||
|short_description=p@chr6:56484616..56484636,- | |short_description=p@chr6:56484616..56484636,- | ||
}} | }} |
Latest revision as of 02:30, 31 July 2015
Short description: | p@chr6:56484616..56484636, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr6:56484616..56484636, - |
Coexpression cluster: | C457_salivary_Prostate_oral_Small_Keratinocyte_Urothelial_Mammary |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endo-epithelial cell | 7.59e-26 | 42 |
acinar cell of salivary gland | 6.66e-22 | 3 |
endodermal cell | 5.84e-21 | 58 |
epithelial cell of alimentary canal | 1.56e-16 | 20 |
acinar cell | 2.26e-13 | 5 |
epithelial cell | 1.07e-12 | 253 |
protein secreting cell | 3.14e-11 | 6 |
epithelial cell of prostate | 1.62e-10 | 3 |
epithelial cell of Malassez | 5.94e-10 | 3 |
buccal mucosa cell | 1.63e-08 | 1 |
endothelial cell of viscerocranial mucosa | 1.63e-08 | 1 |
keratinized cell of the oral mucosa | 1.63e-08 | 1 |
mammary gland epithelial cell | 6.94e-08 | 4 |
glandular epithelial cell | 1.22e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
saliva-secreting gland | 3.14e-11 | 6 |
gland of oral region | 3.14e-11 | 6 |
gland of foregut | 3.14e-11 | 6 |
oral gland | 3.14e-11 | 6 |
oral cavity | 3.14e-11 | 6 |
orifice | 7.08e-09 | 36 |
mouth | 2.42e-08 | 29 |
stomodeum | 2.42e-08 | 29 |
oral opening | 6.33e-08 | 22 |
mammary gland | 6.94e-08 | 4 |
mammary bud | 6.94e-08 | 4 |
mammary ridge | 6.94e-08 | 4 |
mammary placode | 6.94e-08 | 4 |
jaw skeleton | 1.12e-07 | 4 |
splanchnocranium | 1.12e-07 | 4 |
exocrine gland | 1.40e-07 | 31 |
exocrine system | 1.40e-07 | 31 |
gland of gut | 6.44e-07 | 10 |
head | 6.66e-07 | 56 |
endoderm-derived structure | 7.02e-07 | 160 |
endoderm | 7.02e-07 | 160 |
presumptive endoderm | 7.02e-07 | 160 |