FFCP PHASE1:Hg19::chr1:202130702..202130728,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5778 | |EntrezGene=5778 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9659 | |HGNC=9659 | ||
|TSSclassifier=strong | |||
|UniProt=P35236,C9JBA9,B4DZD9,Q5SXQ0 | |UniProt=P35236,C9JBA9,B4DZD9,Q5SXQ0 | ||
|association_with_transcript=0bp_to_ENST00000309017,ENST00000477554,ENST00000492451,NM_001199797,NM_002832,NR_037663,NR_037664,uc010ppx.1_5end | |association_with_transcript=0bp_to_ENST00000309017,ENST00000477554,ENST00000492451,NM_001199797,NM_002832,NR_037663,NR_037664,uc010ppx.1_5end | ||
|cluster_id=chr1:202130702..202130728,- | |||
|description=CAGE_peak_3_at_PTPN7_5end | |description=CAGE_peak_3_at_PTPN7_5end | ||
|id=chr1:202130702..202130728,- | |id=chr1:202130702..202130728,- | ||
|ontology_enrichment_celltype=CL:0000763!1.09e-41!112;CL:0000049!1.09e-41!112;CL:0000037!7.00e-41!172;CL:0000566!7.00e-41!172;CL:0002032!1.79e-38!165;CL:0000837!1.79e-38!165;CL:0000988!3.44e-37!182;CL:0000738!1.80e-14!140;CL:0000766!1.15e-12!76;CL:0000839!3.05e-11!70;CL:0002031!9.78e-11!124;CL:0000557!2.42e-10!71;CL:0002087!6.61e-09!119;CL:0000134!2.00e-07!358;CL:0002194!3.65e-07!63;CL:0000576!3.65e-07!63;CL:0000040!3.65e-07!63;CL:0000559!3.65e-07!63;CL:0002274!6.26e-07!5;CL:0000457!6.26e-07!5;CL:0002191!6.26e-07!5;CL:0000097!6.26e-07!5;CL:0000831!6.26e-07!5;CL:0002028!6.26e-07!5;CL:0002320!6.48e-07!365;CL:0002009!9.26e-07!65 | |ontology_enrichment_celltype=CL:0000763!1.09e-41!112;CL:0000049!1.09e-41!112;CL:0000037!7.00e-41!172;CL:0000566!7.00e-41!172;CL:0002032!1.79e-38!165;CL:0000837!1.79e-38!165;CL:0000988!3.44e-37!182;CL:0000738!1.80e-14!140;CL:0000766!1.15e-12!76;CL:0000839!3.05e-11!70;CL:0002031!9.78e-11!124;CL:0000557!2.42e-10!71;CL:0002087!6.61e-09!119;CL:0000134!2.00e-07!358;CL:0002194!3.65e-07!63;CL:0000576!3.65e-07!63;CL:0000040!3.65e-07!63;CL:0000559!3.65e-07!63;CL:0002274!6.26e-07!5;CL:0000457!6.26e-07!5;CL:0002191!6.26e-07!5;CL:0000097!6.26e-07!5;CL:0000831!6.26e-07!5;CL:0002028!6.26e-07!5;CL:0002320!6.48e-07!365;CL:0002009!9.26e-07!65 | ||
|ontology_enrichment_celltype_v019=CL:0000763;2.18e-11;100!CL:0000840;2.63e-09;5!CL:0000451;2.39e-07;10 | |ontology_enrichment_celltype_v019=CL:0000763;2.18e-11;100!CL:0000840;2.63e-09;5!CL:0000451;2.39e-07;10 | ||
|ontology_enrichment_celltype_v019_2=CL:0000763,3.20e-39,108;CL:0000049,3.20e-39,108;CL:0000037,4.57e-29,168;CL:0002032,1.33e-27,161;CL:0000837,1.33e-27,161;CL:0000988,4.89e-27,177;CL:0000840,2.97e-09,5;CL:0001029,2.97e-09,5;CL:0000134,3.27e-08,354;CL:0002320,7.43e-08,361;CL:0000451,2.91e-07,10 | |||
|ontology_enrichment_development_v019=CL:0000049;3.88e-11;108!UBERON:0010122;1.05e-07;2 | |ontology_enrichment_development_v019=CL:0000049;3.88e-11;108!UBERON:0010122;1.05e-07;2 | ||
|ontology_enrichment_disease=DOID:1240!3.93e-48!39;DOID:8692!7.16e-42!31;DOID:2531!1.93e-35!51;DOID:0060083!1.93e-35!51;DOID:1036!1.85e-11!8 | |ontology_enrichment_disease=DOID:1240!3.93e-48!39;DOID:8692!7.16e-42!31;DOID:2531!1.93e-35!51;DOID:0060083!1.93e-35!51;DOID:1036!1.85e-11!8 | ||
|ontology_enrichment_disease_v019=DOID:8692;1.80e-69;31!DOID:1240;1.90e-53;39!DOID:2531;3.72e-33;51!DOID:0060083;3.72e-33;51!DOID:1036;7.12e-14;8 | |ontology_enrichment_disease_v019=DOID:8692;1.80e-69;31!DOID:1240;1.90e-53;39!DOID:2531;3.72e-33;51!DOID:0060083;3.72e-33;51!DOID:1036;7.12e-14;8 | ||
|ontology_enrichment_disease_v019_2=DOID:8692,6.29e-73,31;DOID:1240,3.00e-70,39;DOID:2531,8.93e-52,51;DOID:0060083,8.93e-52,51;DOID:0050686,3.99e-14,137;DOID:1036,7.93e-14,8 | |||
|ontology_enrichment_uberon=UBERON:0002390!4.45e-12!102;UBERON:0003061!4.45e-12!102;UBERON:0002193!1.86e-11!112;UBERON:0009663!1.42e-10!7;UBERON:0002371!3.93e-09!80;UBERON:0007023!1.14e-08!115;UBERON:0001474!6.23e-08!86;UBERON:0002308!6.85e-08!9;UBERON:0002420!6.85e-08!9;UBERON:0000125!6.85e-08!9;UBERON:0007245!6.85e-08!9;UBERON:0010009!6.85e-08!9;UBERON:0010011!6.85e-08!9;UBERON:0000454!6.85e-08!9;UBERON:0002405!1.75e-07!115;UBERON:0000369!3.72e-07!4;UBERON:0002435!3.72e-07!4;UBERON:0000204!3.72e-07!4;UBERON:0010082!3.72e-07!4 | |ontology_enrichment_uberon=UBERON:0002390!4.45e-12!102;UBERON:0003061!4.45e-12!102;UBERON:0002193!1.86e-11!112;UBERON:0009663!1.42e-10!7;UBERON:0002371!3.93e-09!80;UBERON:0007023!1.14e-08!115;UBERON:0001474!6.23e-08!86;UBERON:0002308!6.85e-08!9;UBERON:0002420!6.85e-08!9;UBERON:0000125!6.85e-08!9;UBERON:0007245!6.85e-08!9;UBERON:0010009!6.85e-08!9;UBERON:0010011!6.85e-08!9;UBERON:0000454!6.85e-08!9;UBERON:0002405!1.75e-07!115;UBERON:0000369!3.72e-07!4;UBERON:0002435!3.72e-07!4;UBERON:0000204!3.72e-07!4;UBERON:0010082!3.72e-07!4 | ||
|ontology_enrichment_uberon_v019=UBERON:0000369;2.08e-13;4!UBERON:0002435;2.08e-13;4!UBERON:0000204;2.08e-13;4!UBERON:0009663;1.33e-11;7!UBERON:0005383;9.17e-11;3!UBERON:0005382;9.17e-11;3!UBERON:0002420;6.02e-09;9!UBERON:0000125;6.02e-09;9!UBERON:0007245;6.02e-09;9!UBERON:0002308;6.02e-09;9!UBERON:0010009;6.02e-09;9!UBERON:0010011;6.02e-09;9!UBERON:0000454;6.02e-09;9!UBERON:0001873;1.05e-07;2 | |ontology_enrichment_uberon_v019=UBERON:0000369;2.08e-13;4!UBERON:0002435;2.08e-13;4!UBERON:0000204;2.08e-13;4!UBERON:0009663;1.33e-11;7!UBERON:0005383;9.17e-11;3!UBERON:0005382;9.17e-11;3!UBERON:0002420;6.02e-09;9!UBERON:0000125;6.02e-09;9!UBERON:0007245;6.02e-09;9!UBERON:0002308;6.02e-09;9!UBERON:0010009;6.02e-09;9!UBERON:0010011;6.02e-09;9!UBERON:0000454;6.02e-09;9!UBERON:0001873;1.05e-07;2 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000369,1.96e-13,4;UBERON:0002435,1.96e-13,4;UBERON:0000204,1.96e-13,4;UBERON:0010082,1.96e-13,4;UBERON:0009663,1.26e-11,7;UBERON:0005383,1.10e-10,3;UBERON:0005382,1.10e-10,3;UBERON:0002420,5.77e-09,9;UBERON:0000125,5.77e-09,9;UBERON:0007245,5.77e-09,9;UBERON:0002308,5.77e-09,9;UBERON:0010009,5.77e-09,9;UBERON:0010011,5.77e-09,9;UBERON:0000454,5.77e-09,9;UBERON:0001873,1.24e-07,2;UBERON:0010122,1.24e-07,2;UBERON:0002384,2.26e-07,371 | |||
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| ||
|short_description=p3@PTPN7 | |short_description=p3@PTPN7 | ||
}} | }} |
Latest revision as of 20:08, 19 September 2015
Short description: | p3@PTPN7 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_PTPN7_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000309017, ENST00000477554, ENST00000492451, NM_001199797, NM_002832, NR_037663, NR_037664, uc010ppx.1_5end |
EntrezGene: | PTPN7 |
HGNC: | 9659 |
UniProt: | P35236C9JBA9B4DZD9Q5SXQ0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid cell | 3.20e-39 | 108 |
common myeloid progenitor | 3.20e-39 | 108 |
hematopoietic stem cell | 4.57e-29 | 168 |
hematopoietic oligopotent progenitor cell | 1.33e-27 | 161 |
hematopoietic multipotent progenitor cell | 1.33e-27 | 161 |
hematopoietic cell | 4.89e-27 | 177 |
immature conventional dendritic cell | 2.97e-09 | 5 |
common dendritic progenitor | 2.97e-09 | 5 |
mesenchymal cell | 3.27e-08 | 354 |
connective tissue cell | 7.43e-08 | 361 |
dendritic cell | 2.91e-07 | 10 |
Ontology term | p-value | n |
---|---|---|
corpus striatum | 1.96e-13 | 4 |
striatum | 1.96e-13 | 4 |
ventral part of telencephalon | 1.96e-13 | 4 |
future corpus striatum | 1.96e-13 | 4 |
telencephalic nucleus | 1.26e-11 | 7 |
caudate-putamen | 1.10e-10 | 3 |
dorsal striatum | 1.10e-10 | 3 |
basal ganglion | 5.77e-09 | 9 |
neural nucleus | 5.77e-09 | 9 |
nuclear complex of neuraxis | 5.77e-09 | 9 |
nucleus of brain | 5.77e-09 | 9 |
aggregate regional part of brain | 5.77e-09 | 9 |
collection of basal ganglia | 5.77e-09 | 9 |
cerebral subcortex | 5.77e-09 | 9 |
caudate nucleus | 1.24e-07 | 2 |
future caudate nucleus | 1.24e-07 | 2 |
connective tissue | 2.26e-07 | 371 |
Ontology term | p-value | n |
---|---|---|
myeloid leukemia | 6.29e-73 | 31 |
leukemia | 3.00e-70 | 39 |
hematologic cancer | 8.93e-52 | 51 |
immune system cancer | 8.93e-52 | 51 |
organ system cancer | 3.99e-14 | 137 |
chronic leukemia | 7.93e-14 | 8 |