FFCP PHASE1:Hg19::chr1:55446384..55446413,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=199964 | |EntrezGene=199964 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=27296 | |HGNC=27296 | ||
|TSSclassifier=strong | |||
|UniProt=Q8N0U2 | |UniProt=Q8N0U2 | ||
|association_with_transcript=-51bp_to_ENST00000371268,NM_182532,uc001cyd.2_5end | |association_with_transcript=-51bp_to_ENST00000371268,NM_182532,uc001cyd.2_5end | ||
|cluster_id=chr1:55446384..55446413,+ | |||
|coexpression_cluster_id=C94 | |coexpression_cluster_id=C94 | ||
|description=CAGE_peak_3_at_TMEM61_5end | |description=CAGE_peak_3_at_TMEM61_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000167;5.98e-17;1!CL:0000164;5.98e-17;1!CL:0000502;5.98e-17;1!CL:0000172;5.98e-17;1!CL:0000173;5.98e-17;1!CL:0002553;2.08e-16;1 | |ontology_enrichment_celltype_v019=CL:0000167;5.98e-17;1!CL:0000164;5.98e-17;1!CL:0000502;5.98e-17;1!CL:0000172;5.98e-17;1!CL:0000173;5.98e-17;1!CL:0002553;2.08e-16;1 | ||
|ontology_enrichment_celltype_v019_2=CL:0000167,5.53e-17,1;CL:0000164,5.53e-17,1;CL:0000502,5.53e-17,1;CL:0000172,5.53e-17,1;CL:0000173,5.53e-17,1;CL:0002351,5.53e-17,1;CL:0002553,1.93e-16,1 | |||
|ontology_enrichment_development_v019=CL:0002351;5.98e-17;1!UBERON:0008801;9.57e-17;1!UBERON:0006298;2.08e-16;1 | |ontology_enrichment_development_v019=CL:0002351;5.98e-17;1!UBERON:0008801;9.57e-17;1!UBERON:0006298;2.08e-16;1 | ||
|ontology_enrichment_disease=DOID:305!4.07e-08!106;DOID:1749!8.51e-08!14;DOID:0050615!6.49e-07!16;DOID:4929!6.95e-07!2 | |ontology_enrichment_disease=DOID:305!4.07e-08!106;DOID:1749!8.51e-08!14;DOID:0050615!6.49e-07!16;DOID:4929!6.95e-07!2 | ||
|ontology_enrichment_disease_v019=DOID:4430;5.98e-17;1 | |ontology_enrichment_disease_v019=DOID:4430;5.98e-17;1 | ||
|ontology_enrichment_disease_v019_2=DOID:4430,5.53e-17,1 | |||
|ontology_enrichment_uberon=UBERON:0007023!1.64e-13!115;UBERON:0004921!4.40e-11!129;UBERON:0004185!4.40e-11!129;UBERON:0004119!4.10e-10!169;UBERON:0000925!4.10e-10!169;UBERON:0006595!4.10e-10!169;UBERON:0001004!5.06e-10!72;UBERON:0001007!7.98e-10!155;UBERON:0001555!7.98e-10!155;UBERON:0007026!7.98e-10!155;UBERON:0000065!1.62e-08!53;UBERON:0000007!3.36e-08!2;UBERON:0001829!3.98e-08!2;UBERON:0003408!6.25e-08!10;UBERON:0003127!1.16e-07!2;UBERON:0005156!3.11e-07!59;UBERON:0000990!3.11e-07!59 | |ontology_enrichment_uberon=UBERON:0007023!1.64e-13!115;UBERON:0004921!4.40e-11!129;UBERON:0004185!4.40e-11!129;UBERON:0004119!4.10e-10!169;UBERON:0000925!4.10e-10!169;UBERON:0006595!4.10e-10!169;UBERON:0001004!5.06e-10!72;UBERON:0001007!7.98e-10!155;UBERON:0001555!7.98e-10!155;UBERON:0007026!7.98e-10!155;UBERON:0000065!1.62e-08!53;UBERON:0000007!3.36e-08!2;UBERON:0001829!3.98e-08!2;UBERON:0003408!6.25e-08!10;UBERON:0003127!1.16e-07!2;UBERON:0005156!3.11e-07!59;UBERON:0000990!3.11e-07!59 | ||
|ontology_enrichment_uberon_v019=UBERON:0000007;2.01e-31;2!UBERON:0001829;2.54e-31;2!UBERON:0001044;2.39e-23;6!UBERON:0003293;2.39e-23;6!UBERON:0003294;2.39e-23;6!UBERON:0010047;2.39e-23;6!UBERON:0003408;2.39e-23;6!UBERON:0000167;2.39e-23;6!UBERON:0001831;9.57e-17;1!UBERON:0001567;9.57e-17;1!UBERON:0001736;2.08e-16;1!UBERON:0003296;2.96e-16;4!UBERON:0010133;2.96e-16;4!UBERON:0001041;2.20e-10;14!UBERON:0001894;1.06e-09;7!UBERON:0004089;4.89e-09;2!UBERON:0000161;8.48e-08;19!UBERON:0000166;8.48e-08;19!UBERON:0004921;4.23e-07;33 | |ontology_enrichment_uberon_v019=UBERON:0000007;2.01e-31;2!UBERON:0001829;2.54e-31;2!UBERON:0001044;2.39e-23;6!UBERON:0003293;2.39e-23;6!UBERON:0003294;2.39e-23;6!UBERON:0010047;2.39e-23;6!UBERON:0003408;2.39e-23;6!UBERON:0000167;2.39e-23;6!UBERON:0001831;9.57e-17;1!UBERON:0001567;9.57e-17;1!UBERON:0001736;2.08e-16;1!UBERON:0003296;2.96e-16;4!UBERON:0010133;2.96e-16;4!UBERON:0001041;2.20e-10;14!UBERON:0001894;1.06e-09;7!UBERON:0004089;4.89e-09;2!UBERON:0000161;8.48e-08;19!UBERON:0000166;8.48e-08;19!UBERON:0004921;4.23e-07;33 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000007,1.37e-31,2;UBERON:0001829,2.97e-31,2;UBERON:0001044,2.30e-23,6;UBERON:0003293,2.30e-23,6;UBERON:0003294,2.30e-23,6;UBERON:0010047,2.30e-23,6;UBERON:0000167,2.30e-23,6;UBERON:0001831,1.04e-16,1;UBERON:0001567,1.04e-16,1;UBERON:0008801,1.04e-16,1;UBERON:0001736,2.25e-16,1;UBERON:0006298,2.25e-16,1;UBERON:0003296,2.44e-16,4;UBERON:0010133,2.44e-16,4;UBERON:0003408,2.67e-14,10;UBERON:0001894,9.52e-10,7;UBERON:0006222,9.52e-10,7;UBERON:0004089,5.08e-09,2;UBERON:0000166,8.27e-07,22 | |||
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| ||
|short_description=p3@TMEM61 | |short_description=p3@TMEM61 | ||
}} | }} |
Latest revision as of 15:23, 18 September 2015
Short description: | p3@TMEM61 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_TMEM61_5end |
Coexpression cluster: | C94_smallcell_adrenal_lung_nonsmall_small_somatostatinoma_teratocarcinoma |
Association with transcript: | -51bp_to_ENST00000371268, NM_182532, uc001cyd.2_5end |
EntrezGene: | TMEM61 |
HGNC: | 27296 |
UniProt: | Q8N0U2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
peptide hormone secreting cell | 5.53e-17 | 1 |
enteroendocrine cell | 5.53e-17 | 1 |
type D enteroendocrine cell | 5.53e-17 | 1 |
somatostatin secreting cell | 5.53e-17 | 1 |
pancreatic D cell | 5.53e-17 | 1 |
progenitor cell of endocrine pancreas | 5.53e-17 | 1 |
lung fibroblast | 1.93e-16 | 1 |
Ontology term | p-value | n |
---|---|---|
pituitary gland | 1.37e-31 | 2 |
major salivary gland | 2.97e-31 | 2 |
saliva-secreting gland | 2.30e-23 | 6 |
gland of oral region | 2.30e-23 | 6 |
gland of foregut | 2.30e-23 | 6 |
oral gland | 2.30e-23 | 6 |
oral cavity | 2.30e-23 | 6 |
parotid gland | 1.04e-16 | 1 |
cheek | 1.04e-16 | 1 |
parotid gland primordium | 1.04e-16 | 1 |
submandibular gland | 2.25e-16 | 1 |
submandibular gland primordium | 2.25e-16 | 1 |
gland of diencephalon | 2.44e-16 | 4 |
neuroendocrine gland | 2.44e-16 | 4 |
gland of gut | 2.67e-14 | 10 |
diencephalon | 9.52e-10 | 7 |
future diencephalon | 9.52e-10 | 7 |
midface | 5.08e-09 | 2 |
oral opening | 8.27e-07 | 22 |
Ontology term | p-value | n |
---|---|---|
somatostatinoma | 5.53e-17 | 1 |