FFCP PHASE1:Hg19::chr1:209827344..209827383,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:209827344..209827383,- | |||
|coexpression_cluster_id=C1155 | |coexpression_cluster_id=C1155 | ||
|description=CAGE_peak_at_chr1:209827344..209827383,- | |description=CAGE_peak_at_chr1:209827344..209827383,- | ||
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|ontology_enrichment_celltype=CL:0002076!1.58e-27!43;CL:0000223!1.59e-26!59;CL:0002368!4.43e-15!13;CL:0002621!4.71e-13!3;CL:0000066!3.05e-12!254;CL:0002251!1.58e-11!21;CL:0000244!3.56e-10!4;CL:0000731!3.56e-10!4;CL:0002159!1.11e-07!13;CL:0002202!1.13e-07!9;CL:0002632!1.13e-07!9;CL:0002231!5.77e-07!3 | |ontology_enrichment_celltype=CL:0002076!1.58e-27!43;CL:0000223!1.59e-26!59;CL:0002368!4.43e-15!13;CL:0002621!4.71e-13!3;CL:0000066!3.05e-12!254;CL:0002251!1.58e-11!21;CL:0000244!3.56e-10!4;CL:0000731!3.56e-10!4;CL:0002159!1.11e-07!13;CL:0002202!1.13e-07!9;CL:0002632!1.13e-07!9;CL:0002231!5.77e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0002231;3.87e-30;3!CL:0002563;5.14e-23;4!CL:0002253;2.45e-12;2!CL:0002076;3.56e-12;42!CL:0002328;1.40e-08;3!CL:0002541;1.40e-08;3!CL:0000182;2.24e-08;12 | |ontology_enrichment_celltype_v019=CL:0002231;3.87e-30;3!CL:0002563;5.14e-23;4!CL:0002253;2.45e-12;2!CL:0002076;3.56e-12;42!CL:0002328;1.40e-08;3!CL:0002541;1.40e-08;3!CL:0000182;2.24e-08;12 | ||
|ontology_enrichment_celltype_v019_2=CL:0002231,3.59e-30,3;CL:0002563,4.60e-23,4;CL:0000223,1.71e-18,58;CL:0002076,2.77e-13,42;CL:0002253,2.32e-12,2;CL:0002328,1.40e-08,3;CL:0002541,1.51e-08,3;CL:0000182,2.29e-08,12 | |||
|ontology_enrichment_development_v019=CL:0000223;4.34e-13;58 | |ontology_enrichment_development_v019=CL:0000223;4.34e-13;58 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0000485;8.26e-29;7!UBERON:0001242;5.14e-23;4!UBERON:0001262;5.14e-23;4!UBERON:0004786;5.14e-23;4!UBERON:0004808;5.14e-23;4!UBERON:0001277;5.14e-23;4!UBERON:0003929;1.31e-13;7!UBERON:0003350;4.94e-12;8!UBERON:0002107;3.25e-11;19!UBERON:0006925;3.25e-11;19!UBERON:0002367;5.75e-09;11!UBERON:0010147;5.75e-09;11!UBERON:0002423;1.13e-08;25!UBERON:0004815;1.40e-08;3!UBERON:0002031;1.40e-08;3!UBERON:0003124;1.40e-08;3!UBERON:0000920;1.40e-08;3!UBERON:0003937;2.70e-08;12!UBERON:0005399;2.70e-08;12!UBERON:0002365;2.52e-07;31!UBERON:0002330;2.52e-07;31!UBERON:0001007;7.40e-07;81!UBERON:0002530;8.15e-07;57!UBERON:0001052;8.37e-07;4 | |ontology_enrichment_uberon_v019=UBERON:0000485;8.26e-29;7!UBERON:0001242;5.14e-23;4!UBERON:0001262;5.14e-23;4!UBERON:0004786;5.14e-23;4!UBERON:0004808;5.14e-23;4!UBERON:0001277;5.14e-23;4!UBERON:0003929;1.31e-13;7!UBERON:0003350;4.94e-12;8!UBERON:0002107;3.25e-11;19!UBERON:0006925;3.25e-11;19!UBERON:0002367;5.75e-09;11!UBERON:0010147;5.75e-09;11!UBERON:0002423;1.13e-08;25!UBERON:0004815;1.40e-08;3!UBERON:0002031;1.40e-08;3!UBERON:0003124;1.40e-08;3!UBERON:0000920;1.40e-08;3!UBERON:0003937;2.70e-08;12!UBERON:0005399;2.70e-08;12!UBERON:0002365;2.52e-07;31!UBERON:0002330;2.52e-07;31!UBERON:0001007;7.40e-07;81!UBERON:0002530;8.15e-07;57!UBERON:0001052;8.37e-07;4 | ||
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| ||
|short_description=p@chr1:209827344..209827383,- | |short_description=p@chr1:209827344..209827383,- | ||
}} | }} |
Latest revision as of 03:22, 28 July 2015
Short description: | p@chr1:209827344..209827383, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:209827344..209827383, - |
Coexpression cluster: | C1155_Hepatocyte_Intestinal_Prostate_liver_colon_small_Retinal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of prostate | 3.59e-30 | 3 |
intestinal epithelial cell | 4.60e-23 | 4 |
endodermal cell | 1.71e-18 | 58 |
endo-epithelial cell | 2.77e-13 | 42 |
epithelial cell of large intestine | 2.32e-12 | 2 |
bronchial epithelial cell | 1.40e-08 | 3 |
chorionic membrane mesenchymal stem cell | 1.51e-08 | 3 |
hepatocyte | 2.29e-08 | 12 |