FFCP PHASE1:Hg19::chrX:153095771..153095780,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=57595 | |EntrezGene=57595 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=21167 | |HGNC=21167 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=11bp_to_ENST00000480650_5end | |association_with_transcript=11bp_to_ENST00000480650_5end | ||
|cluster_id=chrX:153095771..153095780,- | |||
|coexpression_cluster_id=C49 | |coexpression_cluster_id=C49 | ||
|description=CAGE_peak_19_at_PDZD4_5end | |description=CAGE_peak_19_at_PDZD4_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0002322!4.80e-19!5;CL:0000039!5.94e-09!7;CL:0000586!5.94e-09!7 | |ontology_enrichment_celltype=CL:0002322!4.80e-19!5;CL:0000039!5.94e-09!7;CL:0000586!5.94e-09!7 | ||
|ontology_enrichment_celltype_v019=CL:0000540;5.43e-23;6!CL:0000404;5.43e-23;6!CL:0000039;6.48e-20;7!CL:0000586;6.48e-20;7!CL:0002322;7.01e-08;5 | |ontology_enrichment_celltype_v019=CL:0000540;5.43e-23;6!CL:0000404;5.43e-23;6!CL:0000039;6.48e-20;7!CL:0000586;6.48e-20;7!CL:0002322;7.01e-08;5 | ||
|ontology_enrichment_celltype_v019_2=CL:0000540,4.86e-23,6;CL:0000031,4.86e-23,6;CL:0000404,4.86e-23,6;CL:0000039,6.48e-20,7;CL:0000586,6.48e-20,7;CL:0000047,1.44e-17,8;CL:0002322,7.49e-08,5 | |||
|ontology_enrichment_development_v019=CL:0000031;5.43e-23;6!UBERON:0009117;2.84e-14;10!UBERON:0005564;2.84e-14;10 | |ontology_enrichment_development_v019=CL:0000031;5.43e-23;6!UBERON:0009117;2.84e-14;10!UBERON:0005564;2.84e-14;10 | ||
|ontology_enrichment_disease=DOID:3095!2.31e-09!22;DOID:2994!2.31e-09!22;DOID:114!2.78e-08!2 | |ontology_enrichment_disease=DOID:3095!2.31e-09!22;DOID:2994!2.31e-09!22;DOID:114!2.78e-08!2 | ||
|ontology_enrichment_disease_v019=DOID:3095;2.85e-14;22!DOID:2994;2.85e-14;22 | |ontology_enrichment_disease_v019=DOID:3095;2.85e-14;22!DOID:2994;2.85e-14;22 | ||
|ontology_enrichment_disease_v019_2=DOID:3095,2.85e-14,22;DOID:2994,2.85e-14,22 | |||
|ontology_enrichment_uberon=UBERON:0001017!1.30e-14!82;UBERON:0005743!1.06e-13!86;UBERON:0000073!2.93e-13!94;UBERON:0001016!2.93e-13!94;UBERON:0007023!2.56e-12!115;UBERON:0000473!9.76e-12!8;UBERON:0001049!2.11e-11!57;UBERON:0005068!2.11e-11!57;UBERON:0006241!2.11e-11!57;UBERON:0007135!2.11e-11!57;UBERON:0002346!2.13e-11!90;UBERON:0003075!7.70e-11!86;UBERON:0007284!7.70e-11!86;UBERON:0002791!5.07e-10!33;UBERON:0001893!1.14e-09!34;UBERON:0002616!2.25e-09!59;UBERON:0002780!2.75e-09!41;UBERON:0001890!2.75e-09!41;UBERON:0006240!2.75e-09!41;UBERON:0003080!5.16e-09!42;UBERON:0000955!1.46e-08!69;UBERON:0006238!1.46e-08!69;UBERON:0001869!1.63e-08!32;UBERON:0003135!1.99e-08!11;UBERON:0002619!2.41e-08!22;UBERON:0002360!5.67e-08!2;UBERON:0000094!5.67e-08!2;UBERON:0007645!5.67e-08!2;UBERON:0002020!6.38e-08!34;UBERON:0003528!6.38e-08!34;UBERON:0000924!9.11e-08!173;UBERON:0006601!9.11e-08!173;UBERON:0003056!1.08e-07!61;UBERON:0004121!2.63e-07!169;UBERON:0000956!3.10e-07!25;UBERON:0000203!3.10e-07!25;UBERON:0001950!5.16e-07!20 | |ontology_enrichment_uberon=UBERON:0001017!1.30e-14!82;UBERON:0005743!1.06e-13!86;UBERON:0000073!2.93e-13!94;UBERON:0001016!2.93e-13!94;UBERON:0007023!2.56e-12!115;UBERON:0000473!9.76e-12!8;UBERON:0001049!2.11e-11!57;UBERON:0005068!2.11e-11!57;UBERON:0006241!2.11e-11!57;UBERON:0007135!2.11e-11!57;UBERON:0002346!2.13e-11!90;UBERON:0003075!7.70e-11!86;UBERON:0007284!7.70e-11!86;UBERON:0002791!5.07e-10!33;UBERON:0001893!1.14e-09!34;UBERON:0002616!2.25e-09!59;UBERON:0002780!2.75e-09!41;UBERON:0001890!2.75e-09!41;UBERON:0006240!2.75e-09!41;UBERON:0003080!5.16e-09!42;UBERON:0000955!1.46e-08!69;UBERON:0006238!1.46e-08!69;UBERON:0001869!1.63e-08!32;UBERON:0003135!1.99e-08!11;UBERON:0002619!2.41e-08!22;UBERON:0002360!5.67e-08!2;UBERON:0000094!5.67e-08!2;UBERON:0007645!5.67e-08!2;UBERON:0002020!6.38e-08!34;UBERON:0003528!6.38e-08!34;UBERON:0000924!9.11e-08!173;UBERON:0006601!9.11e-08!173;UBERON:0003056!1.08e-07!61;UBERON:0004121!2.63e-07!169;UBERON:0000956!3.10e-07!25;UBERON:0000203!3.10e-07!25;UBERON:0001950!5.16e-07!20 | ||
|ontology_enrichment_uberon_v019=UBERON:0000473;1.44e-17;8!UBERON:0003135;4.52e-13;11!UBERON:0000991;2.60e-07;21!UBERON:0003101;5.09e-07;22!UBERON:0000079;5.09e-07;22 | |ontology_enrichment_uberon_v019=UBERON:0000473;1.44e-17;8!UBERON:0003135;4.52e-13;11!UBERON:0000991;2.60e-07;21!UBERON:0003101;5.09e-07;22!UBERON:0000079;5.09e-07;22 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,1.44e-17,8;UBERON:0003135,4.52e-13,11;UBERON:0000991,2.60e-07,21;UBERON:0009196,2.60e-07,21;UBERON:0009117,2.60e-07,21;UBERON:0005564,2.60e-07,21;UBERON:0004176,5.09e-07,22;UBERON:0003101,5.09e-07,22;UBERON:0000079,5.09e-07,22 | |||
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| ||
|short_description=p19@PDZD4 | |short_description=p19@PDZD4 | ||
}} | }} |
Latest revision as of 00:59, 20 September 2015
Short description: | p19@PDZD4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_19_at_PDZD4_5end |
Coexpression cluster: | C49_H9_iPS_testicular_HES3GFP_teratocarcinoma_hepatoblastoma_choriocarcinoma |
Association with transcript: | 11bp_to_ENST00000480650_5end |
EntrezGene: | PDZD4 |
HGNC: | 21167 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 4.86e-23 | 6 |
neuroblast | 4.86e-23 | 6 |
electrically signaling cell | 4.86e-23 | 6 |
germ line cell | 6.48e-20 | 7 |
germ cell | 6.48e-20 | 7 |
neuronal stem cell | 1.44e-17 | 8 |
embryonic stem cell | 7.49e-08 | 5 |
Ontology term | p-value | n |
---|---|---|
testis | 1.44e-17 | 8 |
male reproductive organ | 4.52e-13 | 11 |
gonad | 2.60e-07 | 21 |
indifferent external genitalia | 2.60e-07 | 21 |
indifferent gonad | 2.60e-07 | 21 |
gonad primordium | 2.60e-07 | 21 |
external genitalia | 5.09e-07 | 22 |
male organism | 5.09e-07 | 22 |
male reproductive system | 5.09e-07 | 22 |
Ontology term | p-value | n |
---|---|---|
germ cell and embryonal cancer | 2.85e-14 | 22 |
germ cell cancer | 2.85e-14 | 22 |