FFCP PHASE1:Hg19::chr17:6658693..6658704,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=54739 | |EntrezGene=54739 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30932 | |HGNC=30932 | ||
|TSSclassifier=strong | |||
|UniProt=Q6GPH4 | |UniProt=Q6GPH4 | ||
|association_with_transcript=-89bp_to_uc010clr.1_5end | |association_with_transcript=-89bp_to_uc010clr.1_5end | ||
|cluster_id=chr17:6658693..6658704,+ | |||
|description=CAGE_peak_5_at_XAF1_5end | |description=CAGE_peak_5_at_XAF1_5end | ||
|id=chr17:6658693..6658704,+ | |id=chr17:6658693..6658704,+ | ||
|ontology_enrichment_celltype=CL:0000057!1.18e-12!75;CL:0002620!7.04e-12!23;CL:0000055!1.81e-10!180 | |ontology_enrichment_celltype=CL:0000057!1.18e-12!75;CL:0002620!7.04e-12!23;CL:0000055!1.81e-10!180 | ||
|ontology_enrichment_celltype_v019=CL:1000306;1.59e-17;4!CL:0002547;1.59e-17;4!CL:0002620;4.17e-15;23!CL:0002591;1.05e-08;1 | |ontology_enrichment_celltype_v019=CL:1000306;1.59e-17;4!CL:0002547;1.59e-17;4!CL:0002620;4.17e-15;23!CL:0002591;1.05e-08;1 | ||
|ontology_enrichment_celltype_v019_2=CL:1000306,1.55e-17,4;CL:0002547,1.55e-17,4;CL:0002620,3.29e-15,23;CL:0000057,2.33e-14,76;CL:0002591,1.53e-08,1 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:2394!9.26e-09!14;DOID:17!3.23e-07!5;DOID:450!3.23e-07!5;DOID:66!3.23e-07!5;DOID:423!3.23e-07!5;DOID:0080000!3.23e-07!5;DOID:11722!3.23e-07!5 | |ontology_enrichment_disease=DOID:2394!9.26e-09!14;DOID:17!3.23e-07!5;DOID:450!3.23e-07!5;DOID:66!3.23e-07!5;DOID:423!3.23e-07!5;DOID:0080000!3.23e-07!5;DOID:11722!3.23e-07!5 | ||
|ontology_enrichment_disease_v019=DOID:3571;4.02e-09;1!DOID:4235;1.05e-08;1!DOID:17;8.40e-07;5!DOID:450;8.40e-07;5!DOID:66;8.40e-07;5!DOID:423;8.40e-07;5!DOID:0080000;8.40e-07;5!DOID:11722;8.40e-07;5 | |ontology_enrichment_disease_v019=DOID:3571;4.02e-09;1!DOID:4235;1.05e-08;1!DOID:17;8.40e-07;5!DOID:450;8.40e-07;5!DOID:66;8.40e-07;5!DOID:423;8.40e-07;5!DOID:0080000;8.40e-07;5!DOID:11722;8.40e-07;5 | ||
|ontology_enrichment_disease_v019_2=DOID:3571,4.52e-09,1;DOID:4235,1.42e-08,1;DOID:17,6.85e-07,5;DOID:450,6.85e-07,5;DOID:66,6.85e-07,5;DOID:423,6.85e-07,5;DOID:0080000,6.85e-07,5;DOID:11722,6.85e-07,5 | |||
|ontology_enrichment_uberon=UBERON:0007023!8.83e-09!115;UBERON:0002199!2.19e-07!45;UBERON:0002416!2.19e-07!45;UBERON:0002097!2.48e-07!40 | |ontology_enrichment_uberon=UBERON:0007023!8.83e-09!115;UBERON:0002199!2.19e-07!45;UBERON:0002416!2.19e-07!45;UBERON:0002097!2.48e-07!40 | ||
|ontology_enrichment_uberon_v019=UBERON:0004797;1.59e-17;4!UBERON:0000415;1.59e-17;4!UBERON:0007240;1.59e-17;4!UBERON:0005742;1.59e-17;4!UBERON:0005734;1.59e-17;4!UBERON:0004664;1.59e-17;4!UBERON:0004663;1.59e-17;4!UBERON:0006834;1.05e-08;1!UBERON:0002097;2.95e-07;41 | |ontology_enrichment_uberon_v019=UBERON:0004797;1.59e-17;4!UBERON:0000415;1.59e-17;4!UBERON:0007240;1.59e-17;4!UBERON:0005742;1.59e-17;4!UBERON:0005734;1.59e-17;4!UBERON:0004664;1.59e-17;4!UBERON:0004663;1.59e-17;4!UBERON:0006834;1.05e-08;1!UBERON:0002097;2.95e-07;41 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000415,1.55e-17,4;UBERON:0007240,1.55e-17,4;UBERON:0005742,1.55e-17,4;UBERON:0005734,1.55e-17,4;UBERON:0004664,1.55e-17,4;UBERON:0004663,1.55e-17,4;UBERON:0004797,2.98e-10,7;UBERON:0006834,5.70e-09,1;UBERON:0002097,3.55e-08,41;UBERON:0002199,3.37e-07,46;UBERON:0002416,3.37e-07,46 | |||
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| ||
|short_description=p5@XAF1 | |short_description=p5@XAF1 | ||
}} | }} |
Latest revision as of 00:20, 17 September 2015
Short description: | p5@XAF1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_XAF1_5end |
Coexpression cluster: | NA |
Association with transcript: | -89bp_to_uc010clr.1_5end |
EntrezGene: | XAF1 |
HGNC: | 30932 |
UniProt: | Q6GPH4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast of tunica adventitia of artery | 1.55e-17 | 4 |
fibroblast of the aortic adventitia | 1.55e-17 | 4 |
skin fibroblast | 3.29e-15 | 23 |
fibroblast | 2.33e-14 | 76 |
smooth muscle cell of the pulmonary artery | 1.53e-08 | 1 |
Ontology term | p-value | n |
---|---|---|
artery wall | 1.55e-17 | 4 |
tunica adventitia of artery | 1.55e-17 | 4 |
adventitia | 1.55e-17 | 4 |
tunica adventitia of blood vessel | 1.55e-17 | 4 |
aorta tunica adventitia | 1.55e-17 | 4 |
aorta wall | 1.55e-17 | 4 |
blood vessel layer | 2.98e-10 | 7 |
uterus or analog | 5.70e-09 | 1 |
skin of body | 3.55e-08 | 41 |
integument | 3.37e-07 | 46 |
integumental system | 3.37e-07 | 46 |
Ontology term | p-value | n |
---|---|---|
liver cancer | 4.52e-09 | 1 |
spindle cell sarcoma | 1.42e-08 | 1 |
musculoskeletal system disease | 6.85e-07 | 5 |
myotonic disease | 6.85e-07 | 5 |
muscle tissue disease | 6.85e-07 | 5 |
myopathy | 6.85e-07 | 5 |
muscular disease | 6.85e-07 | 5 |
myotonic dystrophy | 6.85e-07 | 5 |