FFCP PHASE1:Hg19::chr14:106642049..106642054,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(5 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=5549 | |HGNC=5549 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=1bp_to_ENST00000390605_5end | |association_with_transcript=1bp_to_ENST00000390605_5end | ||
|cluster_id=chr14:106642049..106642054,- | |||
|coexpression_cluster_id=C481 | |coexpression_cluster_id=C481 | ||
|description=CAGE_peak_1_at_IGHV1-18_5end | |description=CAGE_peak_1_at_IGHV1-18_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0000236!1.66e-18!14;CL:0000945!1.32e-09!24;CL:0000826!1.32e-09!24 | |ontology_enrichment_celltype=CL:0000236!1.66e-18!14;CL:0000945!1.32e-09!24;CL:0000826!1.32e-09!24 | ||
|ontology_enrichment_celltype_v019=CL:0000236;1.00e-30;13!CL:0000945;1.72e-15;24 | |ontology_enrichment_celltype_v019=CL:0000236;1.00e-30;13!CL:0000945;1.72e-15;24 | ||
|ontology_enrichment_celltype_v019_2=CL:0000236,2.42e-28,14;CL:0000945,1.74e-15,24;CL:0000826,1.74e-15,24 | |||
|ontology_enrichment_development_v019=UBERON:0004872;1.83e-12;7!UBERON:0006965;5.89e-08;2!UBERON:0006595;4.64e-07;86 | |ontology_enrichment_development_v019=UBERON:0004872;1.83e-12;7!UBERON:0006965;5.89e-08;2!UBERON:0006595;4.64e-07;86 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!6.91e-62!115;UBERON:0000178!6.35e-17!15;UBERON:0000179!6.35e-17!15;UBERON:0000463!6.35e-17!15;UBERON:0002106!6.43e-08!3;UBERON:0004854!6.43e-08!3;UBERON:0009034!6.43e-08!3;UBERON:0002095!6.43e-08!3;UBERON:0004782!6.43e-08!3;UBERON:0003281!6.43e-08!3;UBERON:0009664!6.43e-08!3;UBERON:0002296!6.43e-08!3;UBERON:0005602!6.43e-08!3;UBERON:0001179!6.43e-08!3;UBERON:0006293!6.43e-08!3;UBERON:0004177!6.73e-08!7 | |ontology_enrichment_uberon=UBERON:0007023!6.91e-62!115;UBERON:0000178!6.35e-17!15;UBERON:0000179!6.35e-17!15;UBERON:0000463!6.35e-17!15;UBERON:0002106!6.43e-08!3;UBERON:0004854!6.43e-08!3;UBERON:0009034!6.43e-08!3;UBERON:0002095!6.43e-08!3;UBERON:0004782!6.43e-08!3;UBERON:0003281!6.43e-08!3;UBERON:0009664!6.43e-08!3;UBERON:0002296!6.43e-08!3;UBERON:0005602!6.43e-08!3;UBERON:0001179!6.43e-08!3;UBERON:0006293!6.43e-08!3;UBERON:0004177!6.73e-08!7 | ||
|ontology_enrichment_uberon_v019=UBERON:0002106;2.42e-11;3!UBERON:0004177;3.03e-11;5!UBERON:0005057;3.03e-11;5!UBERON:0007023;1.83e-09;114!UBERON:0001829;2.42e-08;2!UBERON:0002390;4.65e-07;32!UBERON:0000178;5.88e-07;15!UBERON:0000179;5.88e-07;15!UBERON:0000463;5.88e-07;15 | |ontology_enrichment_uberon_v019=UBERON:0002106;2.42e-11;3!UBERON:0004177;3.03e-11;5!UBERON:0005057;3.03e-11;5!UBERON:0007023;1.83e-09;114!UBERON:0001829;2.42e-08;2!UBERON:0002390;4.65e-07;32!UBERON:0000178;5.88e-07;15!UBERON:0000179;5.88e-07;15!UBERON:0000463;5.88e-07;15 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,8.90e-42,114;UBERON:0002106,2.34e-11,3;UBERON:0004854,2.34e-11,3;UBERON:0009034,2.34e-11,3;UBERON:0002095,2.34e-11,3;UBERON:0004782,2.34e-11,3;UBERON:0003281,2.34e-11,3;UBERON:0009664,2.34e-11,3;UBERON:0002296,2.34e-11,3;UBERON:0005602,2.34e-11,3;UBERON:0001179,2.34e-11,3;UBERON:0006293,2.34e-11,3;UBERON:0001829,2.42e-08,2;UBERON:0004177,4.78e-08,7;UBERON:0005057,4.78e-08,7;UBERON:0000178,5.74e-07,15;UBERON:0000179,5.74e-07,15;UBERON:0000463,5.74e-07,15;UBERON:0004921,9.51e-07,118 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383829398097213,0.619264493264304,0,0,0,0,0,0,0,0,0,2.01523926815932,3.2389366601898,0.515151135268373,0,0,0,0,0,0,0,0.256160706529101,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.02699751316684,0,0,0,0,0,0,0,0,0,0,0,35.1992488922645,37.6835641770871,40.02791642386,43.5264827017837,40.0395987036012,39.6579183568593,52.2225449500041,51.5189027449097,4.55370375287559,17.6171156811282,12.6150165281326,0,0,0,0,0,0,0,0,0,0,0.111410456885174,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.4430121722827,0,0,0,0,0,0,0.571994910780128,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.197030760201927,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.620304078368662,0.431428401637234,0.853820462427555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.12164046590889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.64862804660675,0,0,0,0,1.52234282769651,0.764637207142375,2.84823593587081,5.00286728461357,2.46817363851717,1.29694662238543,0.540031437238115,0.79312517629427,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293016358543788,0,0,0,0,0,0,0,0,0,0,0,7.17292757703851,65.2030040653509,0,0,0,0,0,0,0,16.9666657695526,9.57932369387759,0,0.969332746095218,0,0,0,0,3.62499787717397,0,0,0,0,0,0,0,0,0,0,0,0.438770794307945,0,0,12.6198423946227,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,23.8862863458841,58.9127379592239,0,0,0,0,0.337005664903385,0,0,0,0,0,0,0,0,10.488972218329,0,0,0,0,0,0,0,0,0,0,0,0.873633341210151,0,0,0,0,15.033297555705,0,0,0,0,0,0,0,14.7282566370153,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.558564802544508,0,0,0.199679000498991,1.28767814440971,1.33902874465124,0.134366944973453,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.77190770510057,0,0,0,0,6.4322579373603,0,0,0,0,0,0,0,0,0,3.95691030930823,0,0,0,0,0,26.0561286665175,0,84.5047672908279,495.173689768327,0,0,0,0,0,0.919036730290385,0.327872630709804,0,0,0,0,1.14681839138014,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.96388167105098,0,2.34454203369928,0,0,0,0.0675375846183947,0,0,0,0,42.7641058148602,0.992422356778588,0,0,0.535701835878287,0,0,0.227662191351298,0.0887023701626388,0,0,0.135939465953663,0,0,0,1.88383422841234,0,0,0,0,0,4.57449882730601,0,0,0,0,0,0,0,31.4065971938803,0,0,2.54032230114557,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,33.9566295674956,0,0,0.245148321753905,0,0,0,0,0,60.5256431790257,3.73855750246748,151.011086602568,0,0,0,0,55.964972575354,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.47094319487613,0.803892390468535,0,0,47.5511779639187,0,2.51896748360424,0.682821857254437,0,0.891060215894309,0,13.4984383696116,0,135.040866294248,37.7258800365478,0,0,0,0,0,0,0.611207220914332,0,0.665756774185513,47.0980677003001,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383829398097213,0.619264493264304,0,0,0,0,0,0,0,0,0,2.01523926815932,3.2389366601898,0.515151135268373,0,0,0,0,0,0,0,0.256160706529101,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.02699751316684,0,0,0,0,0,0,0,0,0,0,0,35.1992488922645,37.6835641770871,40.02791642386,43.5264827017837,40.0395987036012,39.6579183568593,52.2225449500041,51.5189027449097,4.55370375287559,17.6171156811282,12.6150165281326,0,0,0,0,0,0,0,0,0,0,0.111410456885174,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.4430121722827,0,0,0,0,0,0,0.571994910780128,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.197030760201927,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.620304078368662,0.431428401637234,0.853820462427555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.12164046590889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.64862804660675,0,0,0,0,1.52234282769651,0.764637207142375,2.84823593587081,5.00286728461357,2.46817363851717,1.29694662238543,0.540031437238115,0.79312517629427,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293016358543788,0,0,0,0,0,0,0,0,0,0,0,7.17292757703851,65.2030040653509,0,0,0,0,0,0,0,16.9666657695526,9.57932369387759,0,0.969332746095218,0,0,0,0,3.62499787717397,0,0,0,0,0,0,0,0,0,0,0,0.438770794307945,0,0,12.6198423946227,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,23.8862863458841,58.9127379592239,0,0,0,0,0.337005664903385,0,0,0,0,0,0,0,0,10.488972218329,0,0,0,0,0,0,0,0,0,0,0,0.873633341210151,0,0,0,0,15.033297555705,0,0,0,0,0,0,0,14.7282566370153,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.558564802544508,0,0,0.199679000498991,1.28767814440971,1.33902874465124,0.134366944973453,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.77190770510057,0,0,0,0,6.4322579373603,0,0,0,0,0,0,0,0,0,3.95691030930823,0,0,0,0,0,26.0561286665175,0,84.5047672908279,495.173689768327,0,0,0,0,0,0.919036730290385,0.327872630709804,0,0,0,0,1.14681839138014,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.96388167105098,0,2.34454203369928,0,0,0,0.0675375846183947,0,0,0,0,42.7641058148602,0.992422356778588,0,0,0.535701835878287,0,0,0.227662191351298,0.0887023701626388,0,0,0.135939465953663,0,0,0,1.88383422841234,0,0,0,0,0,4.57449882730601,0,0,0,0,0,0,0,31.4065971938803,0,0,2.54032230114557,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,33.9566295674956,0,0,0.245148321753905,0,0,0,0,0,60.5256431790257,3.73855750246748,151.011086602568,0,0,0,0,55.964972575354,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.47094319487613,0.803892390468535,0,0,47.5511779639187,0,2.51896748360424,0.682821857254437,0,0.891060215894309,0,13.4984383696116,0,135.040866294248,37.7258800365478,0,0,0,0,0,0,0.611207220914332,0,0.665756774185513,47.0980677003001,0 | ||
|short_description=p1@IGHV1-18 | |short_description=p1@IGHV1-18 | ||
}} | }} |
Latest revision as of 22:10, 18 September 2015
Short description: | p1@IGHV1-18 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_IGHV1-18_5end |
Coexpression cluster: | C481_lymph_vein_tonsil_appendix_submaxillary_trachea_temporal |
Association with transcript: | 1bp_to_ENST00000390605_5end |
EntrezGene: | NA |
HGNC: | 5549 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
B cell | 2.42e-28 | 14 |
lymphocyte of B lineage | 1.74e-15 | 24 |
pro-B cell | 1.74e-15 | 24 |
Ontology term | p-value | n |
---|---|---|
adult organism | 8.90e-42 | 114 |
spleen | 2.34e-11 | 3 |
gastrointestinal system mesentery | 2.34e-11 | 3 |
stomach region | 2.34e-11 | 3 |
mesentery | 2.34e-11 | 3 |
gastrointestinal system serosa | 2.34e-11 | 3 |
mesentery of stomach | 2.34e-11 | 3 |
gut mesentery | 2.34e-11 | 3 |
dorsal mesentery | 2.34e-11 | 3 |
dorsal mesogastrium | 2.34e-11 | 3 |
peritoneal cavity | 2.34e-11 | 3 |
spleen primordium | 2.34e-11 | 3 |
major salivary gland | 2.42e-08 | 2 |
hemopoietic organ | 4.78e-08 | 7 |
immune organ | 4.78e-08 | 7 |
blood | 5.74e-07 | 15 |
haemolymphatic fluid | 5.74e-07 | 15 |
organism substance | 5.74e-07 | 15 |
subdivision of digestive tract | 9.51e-07 | 118 |