FFCP PHASE1:Hg19::chr15:72523523..72523560,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5315 | |EntrezGene=5315 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9021 | |HGNC=9021 | ||
|TSSclassifier=strong | |||
|UniProt=E9PF79,B4DUU6 | |UniProt=E9PF79,B4DUU6 | ||
|association_with_transcript=0bp_to_ENST00000389093,ENST00000434220,ENST00000449901_5end | |association_with_transcript=0bp_to_ENST00000389093,ENST00000434220,ENST00000449901_5end | ||
|cluster_id=chr15:72523523..72523560,- | |||
|coexpression_cluster_id=C1409 | |coexpression_cluster_id=C1409 | ||
|description=CAGE_peak_1_at_PKM2_5end | |description=CAGE_peak_1_at_PKM2_5end | ||
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|ontology_enrichment_celltype=CL:0000548!2.10e-34!679;CL:0000004!2.10e-34!679;CL:0000255!2.10e-34!679;CL:0000012!9.50e-33!682;CL:0000144!3.24e-26!625;CL:0002371!1.59e-24!591;CL:0000055!1.07e-22!180;CL:0000003!8.71e-20!722;CL:0000220!3.00e-19!246;CL:0002321!8.07e-19!248;CL:0000222!1.41e-15!119;CL:0000183!7.52e-14!59;CL:0000680!2.40e-13!57;CL:0000056!2.40e-13!57;CL:0000355!2.40e-13!57;CL:0000192!9.06e-13!42;CL:0000514!9.06e-13!42;CL:0000063!1.13e-12!578;CL:0000187!1.66e-12!54;CL:0000066!3.81e-12!254;CL:0000359!5.45e-12!32;CL:0000393!4.47e-10!60;CL:0000211!4.47e-10!60;CL:0000057!6.19e-10!75;CL:1000449!7.86e-07!16 | |ontology_enrichment_celltype=CL:0000548!2.10e-34!679;CL:0000004!2.10e-34!679;CL:0000255!2.10e-34!679;CL:0000012!9.50e-33!682;CL:0000144!3.24e-26!625;CL:0002371!1.59e-24!591;CL:0000055!1.07e-22!180;CL:0000003!8.71e-20!722;CL:0000220!3.00e-19!246;CL:0002321!8.07e-19!248;CL:0000222!1.41e-15!119;CL:0000183!7.52e-14!59;CL:0000680!2.40e-13!57;CL:0000056!2.40e-13!57;CL:0000355!2.40e-13!57;CL:0000192!9.06e-13!42;CL:0000514!9.06e-13!42;CL:0000063!1.13e-12!578;CL:0000187!1.66e-12!54;CL:0000066!3.81e-12!254;CL:0000359!5.45e-12!32;CL:0000393!4.47e-10!60;CL:0000211!4.47e-10!60;CL:0000057!6.19e-10!75;CL:1000449!7.86e-07!16 | ||
|ontology_enrichment_celltype_v019=CL:0000359;1.95e-11;32!CL:0000192;2.50e-09;43!CL:1000449;1.96e-07;15!CL:1000497;3.33e-07;17!CL:0002518;3.33e-07;17!CL:0000187;4.96e-07;55 | |ontology_enrichment_celltype_v019=CL:0000359;1.95e-11;32!CL:0000192;2.50e-09;43!CL:1000449;1.96e-07;15!CL:1000497;3.33e-07;17!CL:0002518;3.33e-07;17!CL:0000187;4.96e-07;55 | ||
|ontology_enrichment_celltype_v019_2=CL:0002321,7.63e-19,250;CL:0000222,1.65e-15,121;CL:0000680,5.72e-13,58;CL:0000056,5.72e-13,58;CL:0000355,5.72e-13,58;CL:0000192,2.60e-12,43;CL:0000514,2.60e-12,43;CL:0000066,2.85e-12,253;CL:0000187,3.92e-12,55;CL:0000359,5.45e-12,32;CL:0000057,7.28e-10,76;CL:0000393,8.66e-10,61;CL:0000211,8.66e-10,61;CL:1000449,1.96e-07,15;CL:1000497,3.33e-07,17;CL:0002518,3.33e-07,17 | |||
|ontology_enrichment_development_v019=CL:0000514;2.50e-09;43!CL:0000355;3.40e-07;58 | |ontology_enrichment_development_v019=CL:0000514;2.50e-09;43!CL:0000355;3.40e-07;58 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000914!1.16e-15!83;UBERON:0002329!1.16e-15!83;UBERON:0003077!1.16e-15!83;UBERON:0003059!1.16e-15!83;UBERON:0007282!1.16e-15!83;UBERON:0009618!1.16e-15!83;UBERON:0007285!1.16e-15!83;UBERON:0000486!1.73e-15!82;UBERON:0004290!1.99e-14!70;UBERON:0001637!6.41e-13!42;UBERON:0003509!6.41e-13!42;UBERON:0004572!6.41e-13!42;UBERON:0001134!1.68e-12!61;UBERON:0002036!1.68e-12!61;UBERON:0003082!1.68e-12!61;UBERON:0005256!6.18e-12!143;UBERON:0002385!3.99e-11!63;UBERON:0001015!3.99e-11!63;UBERON:0000383!3.99e-11!63;UBERON:0004573!1.86e-10!33;UBERON:0004571!1.86e-10!33;UBERON:0003914!2.61e-09!118;UBERON:0004872!2.80e-09!84;UBERON:0002100!2.95e-09!216;UBERON:0001981!6.88e-09!60;UBERON:0007500!6.88e-09!60;UBERON:0004537!6.88e-09!60;UBERON:0006965!6.88e-09!60;UBERON:0002049!7.21e-09!79;UBERON:0007798!7.21e-09!79;UBERON:0000055!3.85e-08!69;UBERON:0000475!1.50e-07!365;UBERON:0002204!2.08e-07!167;UBERON:0003104!3.02e-07!238;UBERON:0009142!3.02e-07!238;UBERON:0000926!3.06e-07!448;UBERON:0004120!3.06e-07!448;UBERON:0006603!3.06e-07!448;UBERON:0002097!3.99e-07!40;UBERON:0003081!5.31e-07!216;UBERON:0002199!7.83e-07!45;UBERON:0002416!7.83e-07!45;UBERON:0004211!7.86e-07!16;UBERON:0001285!7.86e-07!16;UBERON:0007684!7.86e-07!16;UBERON:0003220!7.86e-07!16;UBERON:0004208!7.86e-07!16;UBERON:0000480!8.09e-07!626;UBERON:0000467!9.69e-07!625;UBERON:0000490!9.91e-07!138 | |ontology_enrichment_uberon=UBERON:0000914!1.16e-15!83;UBERON:0002329!1.16e-15!83;UBERON:0003077!1.16e-15!83;UBERON:0003059!1.16e-15!83;UBERON:0007282!1.16e-15!83;UBERON:0009618!1.16e-15!83;UBERON:0007285!1.16e-15!83;UBERON:0000486!1.73e-15!82;UBERON:0004290!1.99e-14!70;UBERON:0001637!6.41e-13!42;UBERON:0003509!6.41e-13!42;UBERON:0004572!6.41e-13!42;UBERON:0001134!1.68e-12!61;UBERON:0002036!1.68e-12!61;UBERON:0003082!1.68e-12!61;UBERON:0005256!6.18e-12!143;UBERON:0002385!3.99e-11!63;UBERON:0001015!3.99e-11!63;UBERON:0000383!3.99e-11!63;UBERON:0004573!1.86e-10!33;UBERON:0004571!1.86e-10!33;UBERON:0003914!2.61e-09!118;UBERON:0004872!2.80e-09!84;UBERON:0002100!2.95e-09!216;UBERON:0001981!6.88e-09!60;UBERON:0007500!6.88e-09!60;UBERON:0004537!6.88e-09!60;UBERON:0006965!6.88e-09!60;UBERON:0002049!7.21e-09!79;UBERON:0007798!7.21e-09!79;UBERON:0000055!3.85e-08!69;UBERON:0000475!1.50e-07!365;UBERON:0002204!2.08e-07!167;UBERON:0003104!3.02e-07!238;UBERON:0009142!3.02e-07!238;UBERON:0000926!3.06e-07!448;UBERON:0004120!3.06e-07!448;UBERON:0006603!3.06e-07!448;UBERON:0002097!3.99e-07!40;UBERON:0003081!5.31e-07!216;UBERON:0002199!7.83e-07!45;UBERON:0002416!7.83e-07!45;UBERON:0004211!7.86e-07!16;UBERON:0001285!7.86e-07!16;UBERON:0007684!7.86e-07!16;UBERON:0003220!7.86e-07!16;UBERON:0004208!7.86e-07!16;UBERON:0000480!8.09e-07!626;UBERON:0000467!9.69e-07!625;UBERON:0000490!9.91e-07!138 | ||
|ontology_enrichment_uberon_v019=UBERON:0004573;1.91e-09;33!UBERON:0004571;1.91e-09;33!UBERON:0001637;5.10e-09;42!UBERON:0003509;5.10e-09;42!UBERON:0004572;5.10e-09;42!UBERON:0006555;1.96e-07;15!UBERON:0004819;1.96e-07;15!UBERON:0001285;1.96e-07;15!UBERON:0007684;1.96e-07;15!UBERON:0003914;2.87e-07;74 | |ontology_enrichment_uberon_v019=UBERON:0004573;1.91e-09;33!UBERON:0004571;1.91e-09;33!UBERON:0001637;5.10e-09;42!UBERON:0003509;5.10e-09;42!UBERON:0004572;5.10e-09;42!UBERON:0006555;1.96e-07;15!UBERON:0004819;1.96e-07;15!UBERON:0001285;1.96e-07;15!UBERON:0007684;1.96e-07;15!UBERON:0003914;2.87e-07;74 | ||
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| ||
|short_description=p1@PKM2 | |short_description=p1@PKM2 | ||
}} | }} |
Latest revision as of 22:41, 18 September 2015
Short description: | p1@PKM2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_PKM2_5end |
Coexpression cluster: | C1409_Smooth_Bronchial_Hair_Fibroblast_Alveolar_Mammary_leiomyoma |
Association with transcript: | 0bp_to_ENST00000389093, ENST00000434220, ENST00000449901_5end |
EntrezGene: | PKM2 |
HGNC: | 9021 |
UniProt: | E9PF79B4DUU6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 7.63e-19 | 250 |
mesodermal cell | 1.65e-15 | 121 |
muscle precursor cell | 5.72e-13 | 58 |
myoblast | 5.72e-13 | 58 |
multi-potent skeletal muscle stem cell | 5.72e-13 | 58 |
smooth muscle cell | 2.60e-12 | 43 |
smooth muscle myoblast | 2.60e-12 | 43 |
epithelial cell | 2.85e-12 | 253 |
muscle cell | 3.92e-12 | 55 |
vascular associated smooth muscle cell | 5.45e-12 | 32 |
fibroblast | 7.28e-10 | 76 |
electrically responsive cell | 8.66e-10 | 61 |
electrically active cell | 8.66e-10 | 61 |
epithelial cell of nephron | 1.96e-07 | 15 |
kidney cell | 3.33e-07 | 17 |
kidney epithelial cell | 3.33e-07 | 17 |