FFCP PHASE1:Hg19::chr1:171501657..171501727,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=23215 | |EntrezGene=23215 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=24903 | |HGNC=24903 | ||
|TSSclassifier=strong | |||
|UniProt=B4DM27 | |UniProt=B4DM27 | ||
|association_with_transcript=-205bp_to_AK297263_5end | |association_with_transcript=-205bp_to_AK297263_5end | ||
|cluster_id=chr1:171501657..171501727,+ | |||
|coexpression_cluster_id=C852 | |coexpression_cluster_id=C852 | ||
|description=CAGE_peak_5_at_PRRC2C_5end | |description=CAGE_peak_5_at_PRRC2C_5end | ||
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|ontology_enrichment_celltype=CL:0002032!2.07e-10!165;CL:0000837!2.07e-10!165;CL:0000037!8.86e-10!172;CL:0000566!8.86e-10!172;CL:0000763!5.30e-09!112;CL:0000049!5.30e-09!112;CL:0000860!1.38e-08!45;CL:0002057!1.44e-08!42;CL:0000988!5.22e-08!182;CL:0000738!2.59e-07!140;CL:0002087!3.42e-07!119 | |ontology_enrichment_celltype=CL:0002032!2.07e-10!165;CL:0000837!2.07e-10!165;CL:0000037!8.86e-10!172;CL:0000566!8.86e-10!172;CL:0000763!5.30e-09!112;CL:0000049!5.30e-09!112;CL:0000860!1.38e-08!45;CL:0002057!1.44e-08!42;CL:0000988!5.22e-08!182;CL:0000738!2.59e-07!140;CL:0002087!3.42e-07!119 | ||
|ontology_enrichment_celltype_v019=CL:0000860;2.40e-10;33!CL:0002057;2.40e-10;33!CL:0000473;2.92e-07;39!CL:0000234;2.92e-07;39 | |ontology_enrichment_celltype_v019=CL:0000860;2.40e-10;33!CL:0002057;2.40e-10;33!CL:0000473;2.92e-07;39!CL:0000234;2.92e-07;39 | ||
|ontology_enrichment_celltype_v019_2=CL:0002032,2.57e-10,161;CL:0000837,2.57e-10,161;CL:0000037,6.65e-10,168;CL:0000763,8.45e-09,108;CL:0000049,8.45e-09,108;CL:0000988,1.95e-08,177;CL:0000860,2.68e-08,42;CL:0002057,2.68e-08,42;CL:0000738,3.17e-07,136;CL:0000473,3.33e-07,48;CL:0000234,3.33e-07,48;CL:0002087,3.97e-07,115 | |||
|ontology_enrichment_development_v019=CL:0002057;3.95e-07;42 | |ontology_enrichment_development_v019=CL:0002057;3.95e-07;42 | ||
|ontology_enrichment_disease=DOID:162!1.17e-18!235;DOID:14566!3.59e-18!239;DOID:0050687!2.84e-10!143;DOID:0050686!4.53e-08!137;DOID:2531!1.31e-07!51;DOID:0060083!1.31e-07!51;DOID:305!4.79e-07!106;DOID:1240!6.99e-07!39 | |ontology_enrichment_disease=DOID:162!1.17e-18!235;DOID:14566!3.59e-18!239;DOID:0050687!2.84e-10!143;DOID:0050686!4.53e-08!137;DOID:2531!1.31e-07!51;DOID:0060083!1.31e-07!51;DOID:305!4.79e-07!106;DOID:1240!6.99e-07!39 | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2=DOID:162,1.52e-17,235;DOID:14566,5.12e-17,239;DOID:0050687,1.83e-09,143;DOID:2531,1.00e-07,51;DOID:0060083,1.00e-07,51;DOID:0050686,1.93e-07,137;DOID:1240,4.65e-07,39 | |||
|ontology_enrichment_uberon=UBERON:0001049!1.92e-07!57;UBERON:0005068!1.92e-07!57;UBERON:0006241!1.92e-07!57;UBERON:0007135!1.92e-07!57 | |ontology_enrichment_uberon=UBERON:0001049!1.92e-07!57;UBERON:0005068!1.92e-07!57;UBERON:0006241!1.92e-07!57;UBERON:0007135!1.92e-07!57 | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,1.53e-07,56;UBERON:0005068,1.53e-07,56;UBERON:0006241,1.53e-07,56;UBERON:0007135,1.53e-07,56;UBERON:0000073,8.46e-07,53;UBERON:0002616,8.46e-07,53 | |||
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| ||
|short_description=p5@PRRC2C | |short_description=p5@PRRC2C | ||
}} | }} |
Latest revision as of 15:20, 18 September 2015
Short description: | p5@PRRC2C |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_PRRC2C_5end |
Coexpression cluster: | C852_CD14_CD4_Neutrophils_CD8_Natural_acute_neuroectodermal |
Association with transcript: | -205bp_to_AK297263_5end |
EntrezGene: | PRRC2C |
HGNC: | 24903 |
UniProt: | B4DM27 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic oligopotent progenitor cell | 2.57e-10 | 161 |
hematopoietic multipotent progenitor cell | 2.57e-10 | 161 |
hematopoietic stem cell | 6.65e-10 | 168 |
myeloid cell | 8.45e-09 | 108 |
common myeloid progenitor | 8.45e-09 | 108 |
hematopoietic cell | 1.95e-08 | 177 |
classical monocyte | 2.68e-08 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.68e-08 | 42 |
leukocyte | 3.17e-07 | 136 |
defensive cell | 3.33e-07 | 48 |
phagocyte | 3.33e-07 | 48 |
nongranular leukocyte | 3.97e-07 | 115 |
Ontology term | p-value | n |
---|---|---|
neural tube | 1.53e-07 | 56 |
neural rod | 1.53e-07 | 56 |
future spinal cord | 1.53e-07 | 56 |
neural keel | 1.53e-07 | 56 |
regional part of nervous system | 8.46e-07 | 53 |
regional part of brain | 8.46e-07 | 53 |
Ontology term | p-value | n |
---|---|---|
cancer | 1.52e-17 | 235 |
disease of cellular proliferation | 5.12e-17 | 239 |
cell type cancer | 1.83e-09 | 143 |
hematologic cancer | 1.00e-07 | 51 |
immune system cancer | 1.00e-07 | 51 |
organ system cancer | 1.93e-07 | 137 |
leukemia | 4.65e-07 | 39 |