FFCP PHASE1:Hg19::chr1:226129194..226129232,-: Difference between revisions
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|id=chr1:226129194..226129232,-
|short_description=p2@LEFTY2
|description=CAGE_peak_2_at_LEFTY2_5end
|association_with_transcript=-5bp_to_ENST00000366820_5end
|Ent...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=7044 | |EntrezGene=7044 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3122 | |HGNC=3122 | ||
|TSSclassifier=strong | |||
|UniProt=O00292 | |UniProt=O00292 | ||
|association_with_transcript=-5bp_to_ENST00000366820_5end | |||
|cluster_id=chr1:226129194..226129232,- | |||
|coexpression_cluster_id=C233 | |||
|description=CAGE_peak_2_at_LEFTY2_5end | |||
|id=chr1:226129194..226129232,- | |||
|ontology_enrichment_celltype=CL:0002322!6.46e-09!5 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0010227;2.21e-40;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001896!4.98e-15!3;UBERON:0005290!4.98e-15!3;UBERON:0010096!4.98e-15!3;UBERON:0003135!2.14e-10!11;UBERON:0007023!2.17e-10!115;UBERON:0000473!1.49e-09!8;UBERON:0003133!4.59e-08!48;UBERON:0000991!1.35e-07!21;UBERON:0009196!1.35e-07!21;UBERON:0009117!1.35e-07!21;UBERON:0005564!1.35e-07!21;UBERON:0005156!1.47e-07!59;UBERON:0000990!1.47e-07!59;UBERON:0004176!3.20e-07!22;UBERON:0003101!5.14e-07!22;UBERON:0000079!5.14e-07!22 | |||
|ontology_enrichment_uberon_v019=UBERON:0006834;8.10e-41;1!UBERON:0002079;2.21e-40;1!UBERON:0002081;5.69e-21;2!UBERON:0001896;1.83e-14;3!UBERON:0004151;1.83e-14;3!UBERON:0005290;1.83e-14;3!UBERON:0002298;6.78e-08;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006834,9.91e-41,1;UBERON:0002079,2.21e-40,1;UBERON:0002081,5.70e-21,2;UBERON:0010227,5.70e-21,2;UBERON:0004151,1.83e-14,3;UBERON:0001896,2.09e-14,3;UBERON:0005290,2.09e-14,3;UBERON:0010096,2.09e-14,3;UBERON:0002298,7.25e-08,6 | |||
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|short_description=p2@LEFTY2 | |||
}} | }} |
Latest revision as of 00:58, 16 September 2015
Short description: | p2@LEFTY2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_LEFTY2_5end |
Coexpression cluster: | C233_uterus_cervix_ovary_epididymis_colon_rectum_MCF7 |
Association with transcript: | -5bp_to_ENST00000366820_5end |
EntrezGene: | LEFTY2 |
HGNC: | 3122 |
UniProt: | O00292 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
uterus or analog | 9.91e-41 | 1 |
left cardiac atrium | 2.21e-40 | 1 |
cardiac atrium | 5.70e-21 | 2 |
future cardiac atrium | 5.70e-21 | 2 |
cardiac chamber | 1.83e-14 | 3 |
medulla oblongata | 2.09e-14 | 3 |
myelencephalon | 2.09e-14 | 3 |
future myelencephalon | 2.09e-14 | 3 |
brainstem | 7.25e-08 | 6 |