FFCP PHASE1:Hg19::chr22:36903101..36903129,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=80020 | |EntrezGene=80020 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=26264 | |HGNC=26264 | ||
|TSSclassifier=strong | |||
|UniProt=B0QYA2,Q8IWF2 | |UniProt=B0QYA2,Q8IWF2 | ||
|association_with_transcript=-11bp_to_ENST00000423980,NM_024955,uc003apo.3_5end | |association_with_transcript=-11bp_to_ENST00000423980,NM_024955,uc003apo.3_5end | ||
|cluster_id=chr22:36903101..36903129,- | |||
|description=CAGE_peak_2_at_FOXRED2_5end | |description=CAGE_peak_2_at_FOXRED2_5end | ||
|id=chr22:36903101..36903129,- | |id=chr22:36903101..36903129,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;6.66e-07;82 | |ontology_enrichment_development_v019=UBERON:0006601;6.66e-07;82 | ||
|ontology_enrichment_disease=DOID:162!5.28e-18!235;DOID:14566!2.73e-17!239;DOID:0050687!3.16e-12!143;DOID:0050686!1.78e-09!137;DOID:305!9.82e-08!106;DOID:2531!2.97e-07!51;DOID:0060083!2.97e-07!51 | |ontology_enrichment_disease=DOID:162!5.28e-18!235;DOID:14566!2.73e-17!239;DOID:0050687!3.16e-12!143;DOID:0050686!1.78e-09!137;DOID:305!9.82e-08!106;DOID:2531!2.97e-07!51;DOID:0060083!2.97e-07!51 | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2=DOID:162,8.62e-18,235;DOID:14566,3.81e-17,239;DOID:0050687,1.70e-12,143;DOID:0050686,3.20e-09,137;DOID:305,6.92e-08,106;DOID:2531,3.64e-07,51;DOID:0060083,3.64e-07,51 | |||
|ontology_enrichment_uberon=UBERON:0000955!3.83e-20!69;UBERON:0006238!3.83e-20!69;UBERON:0005743!4.19e-20!86;UBERON:0001017!1.06e-19!82;UBERON:0000073!4.38e-19!94;UBERON:0001016!4.38e-19!94;UBERON:0002346!3.62e-17!90;UBERON:0002616!1.19e-16!59;UBERON:0000033!2.93e-16!123;UBERON:0001049!7.11e-16!57;UBERON:0005068!7.11e-16!57;UBERON:0006241!7.11e-16!57;UBERON:0007135!7.11e-16!57;UBERON:0000153!2.21e-15!129;UBERON:0007811!2.21e-15!129;UBERON:0003075!2.23e-15!86;UBERON:0007284!2.23e-15!86;UBERON:0000924!1.55e-14!173;UBERON:0006601!1.55e-14!173;UBERON:0002780!3.81e-14!41;UBERON:0001890!3.81e-14!41;UBERON:0006240!3.81e-14!41;UBERON:0003056!8.95e-14!61;UBERON:0003080!1.07e-13!42;UBERON:0004121!4.15e-13!169;UBERON:0001893!1.72e-12!34;UBERON:0002791!4.94e-12!33;UBERON:0001869!6.21e-12!32;UBERON:0002020!1.07e-11!34;UBERON:0003528!1.07e-11!34;UBERON:0000481!4.86e-11!347;UBERON:0000956!2.00e-10!25;UBERON:0000203!2.00e-10!25;UBERON:0002619!5.80e-10!22;UBERON:0000475!7.62e-10!365;UBERON:0001950!3.59e-09!20;UBERON:0000477!3.99e-09!286;UBERON:0000064!1.94e-08!219;UBERON:0000119!1.44e-07!312;UBERON:0000483!5.40e-07!309 | |ontology_enrichment_uberon=UBERON:0000955!3.83e-20!69;UBERON:0006238!3.83e-20!69;UBERON:0005743!4.19e-20!86;UBERON:0001017!1.06e-19!82;UBERON:0000073!4.38e-19!94;UBERON:0001016!4.38e-19!94;UBERON:0002346!3.62e-17!90;UBERON:0002616!1.19e-16!59;UBERON:0000033!2.93e-16!123;UBERON:0001049!7.11e-16!57;UBERON:0005068!7.11e-16!57;UBERON:0006241!7.11e-16!57;UBERON:0007135!7.11e-16!57;UBERON:0000153!2.21e-15!129;UBERON:0007811!2.21e-15!129;UBERON:0003075!2.23e-15!86;UBERON:0007284!2.23e-15!86;UBERON:0000924!1.55e-14!173;UBERON:0006601!1.55e-14!173;UBERON:0002780!3.81e-14!41;UBERON:0001890!3.81e-14!41;UBERON:0006240!3.81e-14!41;UBERON:0003056!8.95e-14!61;UBERON:0003080!1.07e-13!42;UBERON:0004121!4.15e-13!169;UBERON:0001893!1.72e-12!34;UBERON:0002791!4.94e-12!33;UBERON:0001869!6.21e-12!32;UBERON:0002020!1.07e-11!34;UBERON:0003528!1.07e-11!34;UBERON:0000481!4.86e-11!347;UBERON:0000956!2.00e-10!25;UBERON:0000203!2.00e-10!25;UBERON:0002619!5.80e-10!22;UBERON:0000475!7.62e-10!365;UBERON:0001950!3.59e-09!20;UBERON:0000477!3.99e-09!286;UBERON:0000064!1.94e-08!219;UBERON:0000119!1.44e-07!312;UBERON:0000483!5.40e-07!309 | ||
|ontology_enrichment_uberon_v019=UBERON:0001869;2.16e-11;32!UBERON:0001893;3.30e-11;34!UBERON:0002791;4.50e-11;32!UBERON:0003528;9.11e-11;34!UBERON:0002020;9.11e-11;34!UBERON:0000956;9.39e-11;25!UBERON:0000203;9.39e-11;25!UBERON:0002780;1.74e-10;41!UBERON:0001890;1.74e-10;41!UBERON:0002619;3.92e-10;22!UBERON:0000955;6.88e-10;68!UBERON:0000073;1.20e-09;53!UBERON:0002616;1.20e-09;53!UBERON:0001950;2.18e-09;20!UBERON:0001017;3.11e-09;75!UBERON:0001016;2.22e-07;83 | |ontology_enrichment_uberon_v019=UBERON:0001869;2.16e-11;32!UBERON:0001893;3.30e-11;34!UBERON:0002791;4.50e-11;32!UBERON:0003528;9.11e-11;34!UBERON:0002020;9.11e-11;34!UBERON:0000956;9.39e-11;25!UBERON:0000203;9.39e-11;25!UBERON:0002780;1.74e-10;41!UBERON:0001890;1.74e-10;41!UBERON:0002619;3.92e-10;22!UBERON:0000955;6.88e-10;68!UBERON:0000073;1.20e-09;53!UBERON:0002616;1.20e-09;53!UBERON:0001950;2.18e-09;20!UBERON:0001017;3.11e-09;75!UBERON:0001016;2.22e-07;83 | ||
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| ||
|short_description=p2@FOXRED2 | |short_description=p2@FOXRED2 | ||
}} | }} |
Latest revision as of 02:53, 20 September 2015
Short description: | p2@FOXRED2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_FOXRED2_5end |
Coexpression cluster: | NA |
Association with transcript: | -11bp_to_ENST00000423980, NM_024955, uc003apo.3_5end |
EntrezGene: | FOXRED2 |
HGNC: | 26264 |
UniProt: | B0QYA2Q8IWF2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brain | 4.13e-21 | 68 |
future brain | 4.13e-21 | 68 |
central nervous system | 3.27e-20 | 81 |
nervous system | 2.31e-19 | 89 |
regional part of nervous system | 4.21e-17 | 53 |
regional part of brain | 4.21e-17 | 53 |
neural tube | 1.70e-16 | 56 |
neural rod | 1.70e-16 | 56 |
future spinal cord | 1.70e-16 | 56 |
neural keel | 1.70e-16 | 56 |
neurectoderm | 2.79e-16 | 86 |
regional part of forebrain | 1.63e-14 | 41 |
forebrain | 1.63e-14 | 41 |
anterior neural tube | 1.63e-14 | 41 |
future forebrain | 1.63e-14 | 41 |
neural plate | 1.78e-14 | 82 |
presumptive neural plate | 1.78e-14 | 82 |
ectoderm-derived structure | 1.92e-14 | 171 |
ectoderm | 1.92e-14 | 171 |
presumptive ectoderm | 1.92e-14 | 171 |
organ system subdivision | 1.06e-13 | 223 |
pre-chordal neural plate | 1.25e-13 | 61 |
telencephalon | 8.25e-13 | 34 |
cerebral hemisphere | 3.09e-12 | 32 |
brain grey matter | 5.41e-12 | 34 |
gray matter | 5.41e-12 | 34 |
regional part of telencephalon | 5.53e-12 | 32 |
cerebral cortex | 1.10e-10 | 25 |
pallium | 1.10e-10 | 25 |
regional part of cerebral cortex | 3.29e-10 | 22 |
structure with developmental contribution from neural crest | 5.15e-10 | 132 |
ecto-epithelium | 6.34e-10 | 104 |
neocortex | 2.15e-09 | 20 |
Ontology term | p-value | n |
---|---|---|
cancer | 8.62e-18 | 235 |
disease of cellular proliferation | 3.81e-17 | 239 |
cell type cancer | 1.70e-12 | 143 |
organ system cancer | 3.20e-09 | 137 |
carcinoma | 6.92e-08 | 106 |
hematologic cancer | 3.64e-07 | 51 |
immune system cancer | 3.64e-07 | 51 |