FFCP PHASE1:Hg19::chr1:225117350..225117409,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr1:225117350..225117409,+
|short_description=p1@DNAH14
|description=CAGE_peak_1_at_DNAH14_5end
|association_with_transcript=0bp_to_ENST00000366849,ENST0000036...") |
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(11 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=127602 | |EntrezGene=127602 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2945 | |HGNC=2945 | ||
|TSSclassifier=strong | |||
|UniProt=C9JU64,Q0VDD8 | |UniProt=C9JU64,Q0VDD8 | ||
|association_with_transcript=0bp_to_ENST00000366849,ENST00000366850,ENST00000400952,ENST00000413949,ENST00000430092,NM_001145154,NM_001373,NM_144989,uc001hot.3,uc001hou.3,uc001hov.3,uc001how.2_5end | |||
|cluster_id=chr1:225117350..225117409,+ | |||
|coexpression_cluster_id=C3943 | |||
|description=CAGE_peak_1_at_DNAH14_5end | |||
|id=chr1:225117350..225117409,+ | |||
|ontology_enrichment_celltype=CL:0000066!5.56e-16!254 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,1.91e-15,253 | |||
|ontology_enrichment_development_v019=UBERON:0008947;6.10e-08;29!UBERON:0001041;1.73e-07;30 | |||
|ontology_enrichment_disease=DOID:14566!5.68e-36!239;DOID:0050687!1.33e-35!143;DOID:162!1.80e-35!235;DOID:305!2.35e-29!106;DOID:0050686!6.41e-11!137;DOID:3095!1.38e-07!22;DOID:2994!1.38e-07!22 | |||
|ontology_enrichment_disease_v019=DOID:305;1.00e-08;106!DOID:0050687;3.11e-08;143!DOID:3095;2.04e-07;22!DOID:2994;2.04e-07;22 | |||
|ontology_enrichment_disease_v019_2=DOID:14566,6.37e-37,239;DOID:162,2.04e-36,235;DOID:0050687,6.89e-36,143;DOID:305,7.99e-30,106;DOID:0050686,2.04e-11,137;DOID:3095,1.62e-07,22;DOID:2994,1.62e-07,22 | |||
|ontology_enrichment_uberon=UBERON:0000481!1.37e-08!347;UBERON:0001007!6.86e-08!155;UBERON:0001555!6.86e-08!155;UBERON:0007026!6.86e-08!155;UBERON:0004119!2.01e-07!169;UBERON:0000925!2.01e-07!169;UBERON:0006595!2.01e-07!169 | |||
|ontology_enrichment_uberon_v019=UBERON:0000922;6.80e-08;49 | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=2.54349730978779,1.92690471501885,1.40954404095971,0,2.68176656656373,0,0,5.68547886084148,1.56711376919903,2.45733936501509,2.79120467188971,1.52908960491121,1.84636884759917,0.866364470720326,0.331397375727916,4.70627602516243,3.01347264011988,2.92124036154949,3.90346239032406,4.92484232307152,4.48801520737357,3.13454721478088,6.86966369114536,9.85495860524766,10.168953807179,8.32906122652669,9.76997014454354,9.44529375764151,0,0,0.154816123316076,3.67768489791571,3.0120591877825,2.9580320813343,0,0,9.9824149373848,0,0,0,0.223915474239924,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.622822248995575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,13.2171328579026,3.36305137788922,11.3255156453283,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164437904603676,0.276350017785848,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.68280343881454,1.02290049474824,1.0843174571537,1.00267582127178,2.462390822334,4.7717156823066,4.37971383272372,9.35894689924272,13.3037638477538,13.263052639662,11.7881167947941,2.91436230634034,2.96627554227544,0.324547393654683,0.870648686496336,0.930705723632056,0,0,0,0.198762407366705,0,2.08284300964557,2.82653970962005,2.93649605346934,0.825354125820202,0.626984899610432,5.42675194255591,7.47109151642091,5.02080919147005,0.805658634218294,1.52054421143703,1.46437234528902,2.20597848207521,0.81014194788176,4.01848777278359,4.4905874525234,5.85579698513276,4.5994991239765,1.89853131913626,3.48083313467774,0,0,1.3082821564276,2.98183171017191,1.8994576749687,17.6104210481581,5.73673241497627,2.83734705758686,2.24271040056923,1.06748995729705,1.97334038733728,4.04574346019696,4.58016285036939,3.59616186849609,2.27036141467397,3.45705554687999,10.3101430006871,4.37024107562449,2.85235910772225,3.28787097213962,10.9214083738701,10.1979954951923,8.56749920883716,3.26646674007829,11.1779228753709,2.6864703105699,4.75201142912821,4.94533858557114,0.910161361938026,2.87447256726495,4.20840284885166,9.00853343078142,3.87889761677856,4.82875382968922,4.90380473278431,3.60571341375832,3.28953331164061,3.58779271377724,3.20336083227851,4.02670612203168,4.50136644126603,4.74041634496819,3.34932702059318,2.79175284497385,4.89451363499672,2.72823614451356,4.29137416214995,3.40584624976508,4.52608959092673,4.9701342952326,3.12331504505685,3.05209066158878,2.89891279744945,1.90922284413584,2.86804595389004,34.5185588346755,28.7589597257623,22.0768491452085,26.2262469188887,22.7088765788066,19.7087773900948,3.12899064659632,0,2.76269842704961,0.928735856063958,0.721879481669586,12.1856004041039,11.9695129955452,13.2556066435915,15.3308622098028,10.0224544282507,13.9989665275547,13.3482995078563,9.8110732562673,13.8508976500701,0,0,2.4694440679884,1.47008711385542,3.80265104465493,5.89696330006576,1.77236972004421,0,14.2666588710012,4.63233087806019,3.40225884766739,5.62008766288098,5.32803553781643,5.83307204498736,8.47101593806844,4.15973914111831,7.21656710126366,9.04257158805599,3.99189560401794,2.59859605969933,0.925971025153221,1.14152491340759,3.1608175918371,2.57545848628462,0.738651018262192,1.8720341211139,1.78357394746474,2.81201501960331,4.70349958956807,6.37987937590739,8.23938408866204,5.81267877027924,3.06706143332169,2.95597942737566,3.25779205848936,1.03664057770386,1.58531948758658,2.01987893482208,3.80987365753014,1.14596527667483,0,1.71072446022705,4.52440967894623,1.8020583470635,4.0015700568281,4.93376771119587,5.23152082599936,4.18028229179415,6.20504235637333,0,5.917119267892,4.78688609852767,5.2003718455683,2.57207374262142,2.83698264046557,3.19706614819319,0.857867961948885,2.17048642156577,5.76268235746538,4.88604276440603,0.355391948742546,7.12756685640086,5.12446941001296,6.97226766880235,5.59848750619519,0,0.502257091432126,2.10833939483032,3.59437283237374,5.7430967917057,8.5582143024431,4.63300181336253,4.10952645100767,6.44619467663624,0,0,0.215627574859517,0.128343036279748,7.87693335089637,9.10978977003352,3.86644406388848,3.68535783735567,1.91381625495949,0,0,0,2.08575535922538,2.00068208423871,6.78162559249339,3.95144636908534,4.46072471992904,6.78120384645919,4.21709093973768,2.70851489754947,0,3.10419213877515,5.97803038681893,3.87175253937577,4.17041349446798,2.93701736194111,1.71571711905428,0,0,0,0.303127571446259,0,1.20956117331872,2.97729369382532,4.60385919864187,1.96462066103151,2.69092213436972,3.07024349440022,3.21707842287215,0,4.47208112027701,4.6166048581413,4.59912073677331,3.63478100428535,3.60252173225874,15.8325878965025,2.6065841139427,10.0368277940127,2.29628896329214,5.46273504020151,3.54035920390445,3.60959690325929,7.93257972175472,3.13739907670742,4.38417673959782,6.64975262025117,2.27466768141793,3.2317804002538,4.10240240594065,1.54227252690289,3.79325012561394,2.00675909541941,4.07802036872061,6.64860807142979,4.70136984916574,0.657779629937804,2.3529190592241,10.7709052548883,5.24823433119529,9.11059505060049,3.40035338437484,13.1860029338415,11.8813679885647,1.72279661398852,2.60024098414608,1.6068392984416,4.64019447802185,7.24028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| ||
|short_description=p1@DNAH14 | |||
}} | }} |
Latest revision as of 23:51, 15 September 2015
Short description: | p1@DNAH14 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_DNAH14_5end |
Coexpression cluster: | C3943_neuroblastoma_hepatoblastoma_testicular_chronic_pineal_gastrointestinal_nonsmall |
Association with transcript: | 0bp_to_ENST00000366849, ENST00000366850, ENST00000400952, ENST00000413949, ENST00000430092, NM_001145154, NM_001373, NM_144989, uc001hot.3, uc001hou.3, uc001hov.3, uc001how.2_5end |
EntrezGene: | DNAH14 |
HGNC: | 2945 |
UniProt: | C9JU64Q0VDD8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 1.91e-15 | 253 |
Ontology term | p-value | n |
---|---|---|
disease of cellular proliferation | 6.37e-37 | 239 |
cancer | 2.04e-36 | 235 |
cell type cancer | 6.89e-36 | 143 |
carcinoma | 7.99e-30 | 106 |
organ system cancer | 2.04e-11 | 137 |
germ cell and embryonal cancer | 1.62e-07 | 22 |
germ cell cancer | 1.62e-07 | 22 |