FFCP PHASE1:Hg19::chr1:152956549..152956566,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6698 | |EntrezGene=6698 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11259 | |HGNC=11259 | ||
|TSSclassifier=strong | |||
|UniProt=P35321 | |UniProt=P35321 | ||
|association_with_transcript=0bp_to_ENST00000307122,NM_001199828,NM_005987,uc001faw.2,uc009wnu.1_5end | |association_with_transcript=0bp_to_ENST00000307122,NM_001199828,NM_005987,uc001faw.2,uc009wnu.1_5end | ||
|cluster_id=chr1:152956549..152956566,+ | |||
|coexpression_cluster_id=C1597 | |coexpression_cluster_id=C1597 | ||
|description=CAGE_peak_1_at_SPRR1A_5end | |description=CAGE_peak_1_at_SPRR1A_5end | ||
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|ontology_enrichment_celltype=CL:0002076!1.29e-18!43;CL:0002159!8.94e-17!13;CL:0000223!2.14e-12!59;CL:0002251!6.43e-12!21;CL:0002368!2.38e-11!13;CL:0000066!9.76e-11!254;CL:0000362!8.71e-10!8;CL:0000240!1.24e-09!6;CL:0000311!1.24e-09!6;CL:0000079!1.24e-09!6;CL:0000237!1.24e-09!6;CL:0000036!1.24e-09!6;CL:0000357!1.24e-09!6;CL:0000114!1.24e-09!6;CL:0000622!2.89e-09!5;CL:0002077!9.19e-09!33;CL:0000312!2.69e-08!5;CL:0000244!1.08e-07!4;CL:0000731!1.08e-07!4;CL:0000154!1.37e-07!6;CL:0000453!2.14e-07!5 | |ontology_enrichment_celltype=CL:0002076!1.29e-18!43;CL:0002159!8.94e-17!13;CL:0000223!2.14e-12!59;CL:0002251!6.43e-12!21;CL:0002368!2.38e-11!13;CL:0000066!9.76e-11!254;CL:0000362!8.71e-10!8;CL:0000240!1.24e-09!6;CL:0000311!1.24e-09!6;CL:0000079!1.24e-09!6;CL:0000237!1.24e-09!6;CL:0000036!1.24e-09!6;CL:0000357!1.24e-09!6;CL:0000114!1.24e-09!6;CL:0000622!2.89e-09!5;CL:0002077!9.19e-09!33;CL:0000312!2.69e-08!5;CL:0000244!1.08e-07!4;CL:0000731!1.08e-07!4;CL:0000154!1.37e-07!6;CL:0000453!2.14e-07!5 | ||
|ontology_enrichment_celltype_v019=CL:0002159;7.81e-19;14!CL:0002076;3.38e-18;42!CL:0002368;2.36e-16;13!CL:0000622;9.22e-13;5!CL:0002251;3.81e-12;20!CL:0000154;1.52e-10;6!CL:0000244;1.75e-10;4!CL:0000731;1.75e-10;4!CL:0000240;8.06e-10;6!CL:0000311;8.06e-10;6!CL:0000079;8.06e-10;6!CL:0000237;8.06e-10;6!CL:0000362;2.39e-09;9!CL:0002202;4.00e-09;9!CL:0002632;4.00e-09;9!CL:0002077;5.29e-09;34!CL:0002623;3.25e-08;3!CL:0002621;3.92e-08;3!CL:0002328;4.42e-08;3!CL:0000312;6.24e-08;5!CL:0000307;1.03e-07;3!CL:0002166;2.03e-07;3!CL:0000150;7.57e-07;9!CL:0000453;8.04e-07;5 | |ontology_enrichment_celltype_v019=CL:0002159;7.81e-19;14!CL:0002076;3.38e-18;42!CL:0002368;2.36e-16;13!CL:0000622;9.22e-13;5!CL:0002251;3.81e-12;20!CL:0000154;1.52e-10;6!CL:0000244;1.75e-10;4!CL:0000731;1.75e-10;4!CL:0000240;8.06e-10;6!CL:0000311;8.06e-10;6!CL:0000079;8.06e-10;6!CL:0000237;8.06e-10;6!CL:0000362;2.39e-09;9!CL:0002202;4.00e-09;9!CL:0002632;4.00e-09;9!CL:0002077;5.29e-09;34!CL:0002623;3.25e-08;3!CL:0002621;3.92e-08;3!CL:0002328;4.42e-08;3!CL:0000312;6.24e-08;5!CL:0000307;1.03e-07;3!CL:0002166;2.03e-07;3!CL:0000150;7.57e-07;9!CL:0000453;8.04e-07;5 | ||
|ontology_enrichment_celltype_v019_2=CL:0002076,2.04e-23,42;CL:0002159,7.55e-19,14;CL:0002368,2.38e-16,13;CL:0000223,3.90e-15,58;CL:0000622,9.22e-13,5;CL:0002251,3.64e-12,20;CL:0000066,2.14e-11,253;CL:0000154,1.52e-10,6;CL:0000244,1.76e-10,4;CL:0000731,1.76e-10,4;CL:0002077,2.26e-10,34;CL:0000240,8.14e-10,6;CL:0000311,8.14e-10,6;CL:0000079,8.14e-10,6;CL:0000237,8.14e-10,6;CL:0000036,8.14e-10,6;CL:0000357,8.14e-10,6;CL:0000114,8.14e-10,6;CL:0000362,2.41e-09,9;CL:0002202,4.03e-09,9;CL:0002632,4.03e-09,9;CL:0002623,3.25e-08,3;CL:0002621,3.93e-08,3;CL:0002328,4.42e-08,3;CL:0000312,6.29e-08,5;CL:0000068,1.04e-07,3;CL:0000069,1.04e-07,3;CL:0000307,1.04e-07,3;CL:0000377,1.04e-07,3;CL:0002166,1.92e-07,3;CL:0000453,7.46e-07,5;CL:0000150,7.57e-07,9 | |||
|ontology_enrichment_development_v019=CL:0000357;8.06e-10;6!CL:0000114;8.06e-10;6!CL:0000223;2.95e-08;58!CL:0000377;1.03e-07;3 | |ontology_enrichment_development_v019=CL:0000357;8.06e-10;6!CL:0000114;8.06e-10;6!CL:0000223;2.95e-08;58!CL:0000377;1.03e-07;3 | ||
|ontology_enrichment_disease=DOID:1749!2.57e-08!14 | |ontology_enrichment_disease=DOID:1749!2.57e-08!14 | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001004!3.09e-19!72;UBERON:0004119!9.49e-18!169;UBERON:0000925!9.49e-18!169;UBERON:0006595!9.49e-18!169;UBERON:0000161!3.17e-13!35;UBERON:0001007!1.12e-12!155;UBERON:0001555!1.12e-12!155;UBERON:0007026!1.12e-12!155;UBERON:0000166!1.16e-12!21;UBERON:0003102!2.61e-12!95;UBERON:0000065!2.30e-10!53;UBERON:0000165!6.66e-10!28;UBERON:0000930!6.66e-10!28;UBERON:0000077!6.88e-10!130;UBERON:0004921!9.91e-10!129;UBERON:0004185!9.91e-10!129;UBERON:0001041!4.11e-09!98;UBERON:0000365!1.08e-08!5;UBERON:0005181!1.81e-07!35;UBERON:0000072!2.75e-07!46;UBERON:0001444!2.92e-07!48;UBERON:0003408!3.65e-07!10;UBERON:0005910!3.99e-07!6;UBERON:0001044!7.22e-07!6;UBERON:0003293!7.22e-07!6;UBERON:0003294!7.22e-07!6;UBERON:0010047!7.22e-07!6;UBERON:0000167!7.22e-07!6;UBERON:0005178!8.41e-07!34;UBERON:0002224!8.41e-07!34 | |ontology_enrichment_uberon=UBERON:0001004!3.09e-19!72;UBERON:0004119!9.49e-18!169;UBERON:0000925!9.49e-18!169;UBERON:0006595!9.49e-18!169;UBERON:0000161!3.17e-13!35;UBERON:0001007!1.12e-12!155;UBERON:0001555!1.12e-12!155;UBERON:0007026!1.12e-12!155;UBERON:0000166!1.16e-12!21;UBERON:0003102!2.61e-12!95;UBERON:0000065!2.30e-10!53;UBERON:0000165!6.66e-10!28;UBERON:0000930!6.66e-10!28;UBERON:0000077!6.88e-10!130;UBERON:0004921!9.91e-10!129;UBERON:0004185!9.91e-10!129;UBERON:0001041!4.11e-09!98;UBERON:0000365!1.08e-08!5;UBERON:0005181!1.81e-07!35;UBERON:0000072!2.75e-07!46;UBERON:0001444!2.92e-07!48;UBERON:0003408!3.65e-07!10;UBERON:0005910!3.99e-07!6;UBERON:0001044!7.22e-07!6;UBERON:0003293!7.22e-07!6;UBERON:0003294!7.22e-07!6;UBERON:0010047!7.22e-07!6;UBERON:0000167!7.22e-07!6;UBERON:0005178!8.41e-07!34;UBERON:0002224!8.41e-07!34 | ||
|ontology_enrichment_uberon_v019=UBERON:0000165;1.10e-11;28!UBERON:0000161;9.71e-11;19!UBERON:0000166;9.71e-11;19!UBERON:0001041;8.13e-10;14!UBERON:0000486;2.51e-09;12!UBERON:0007196;5.36e-09;15!UBERON:0001558;5.36e-09;15!UBERON:0003126;2.31e-08;7!UBERON:0001005;2.31e-08;7!UBERON:0000365;2.34e-08;5!UBERON:0001949;3.92e-08;3!UBERON:0004815;4.42e-08;3!UBERON:0002031;4.42e-08;3!UBERON:0001003;5.19e-07;15!UBERON:0007376;5.19e-07;15!UBERON:0005910;6.14e-07;6 | |ontology_enrichment_uberon_v019=UBERON:0000165;1.10e-11;28!UBERON:0000161;9.71e-11;19!UBERON:0000166;9.71e-11;19!UBERON:0001041;8.13e-10;14!UBERON:0000486;2.51e-09;12!UBERON:0007196;5.36e-09;15!UBERON:0001558;5.36e-09;15!UBERON:0003126;2.31e-08;7!UBERON:0001005;2.31e-08;7!UBERON:0000365;2.34e-08;5!UBERON:0001949;3.92e-08;3!UBERON:0004815;4.42e-08;3!UBERON:0002031;4.42e-08;3!UBERON:0001003;5.19e-07;15!UBERON:0007376;5.19e-07;15!UBERON:0005910;6.14e-07;6 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001004,8.17e-16,74;UBERON:0003102,1.86e-15,99;UBERON:0004119,6.20e-15,160;UBERON:0000925,6.20e-15,160;UBERON:0006595,6.20e-15,160;UBERON:0000166,1.94e-13,22;UBERON:0000161,8.46e-13,36;UBERON:0000153,2.21e-11,62;UBERON:0007811,2.21e-11,62;UBERON:0000165,3.52e-11,29;UBERON:0000930,3.52e-11,29;UBERON:0001007,8.44e-10,145;UBERON:0001555,8.44e-10,145;UBERON:0007026,8.44e-10,145;UBERON:0000065,1.74e-09,54;UBERON:0000033,2.77e-09,56;UBERON:0007196,5.39e-09,15;UBERON:0001558,5.39e-09,15;UBERON:0003126,2.33e-08,7;UBERON:0001005,2.33e-08,7;UBERON:0000365,2.34e-08,5;UBERON:0001041,3.27e-08,87;UBERON:0001949,3.93e-08,3;UBERON:0004815,4.42e-08,3;UBERON:0002031,4.42e-08,3;UBERON:0003408,6.89e-08,10;UBERON:0001444,1.57e-07,49;UBERON:0004921,5.10e-07,118;UBERON:0001003,5.21e-07,15;UBERON:0007376,5.21e-07,15;UBERON:0007383,5.21e-07,15;UBERON:0005910,6.14e-07,6 | |||
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| ||
|short_description=p1@SPRR1A | |short_description=p1@SPRR1A | ||
}} | }} |
Latest revision as of 04:03, 17 September 2015
Short description: | p1@SPRR1A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_SPRR1A_5end |
Coexpression cluster: | C1597_tongue_esophagus_tonsil_salivary_Urothelial_uterus_Sebocyte |
Association with transcript: | 0bp_to_ENST00000307122, NM_001199828, NM_005987, uc001faw.2, uc009wnu.1_5end |
EntrezGene: | SPRR1A |
HGNC: | 11259 |
UniProt: | P35321 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
respiratory system | 8.17e-16 | 74 |
surface structure | 1.86e-15 | 99 |
endoderm-derived structure | 6.20e-15 | 160 |
endoderm | 6.20e-15 | 160 |
presumptive endoderm | 6.20e-15 | 160 |
oral opening | 1.94e-13 | 22 |
orifice | 8.46e-13 | 36 |
anterior region of body | 2.21e-11 | 62 |
craniocervical region | 2.21e-11 | 62 |
mouth | 3.52e-11 | 29 |
stomodeum | 3.52e-11 | 29 |
digestive system | 8.44e-10 | 145 |
digestive tract | 8.44e-10 | 145 |
primitive gut | 8.44e-10 | 145 |
respiratory tract | 1.74e-09 | 54 |
head | 2.77e-09 | 56 |
tracheobronchial tree | 5.39e-09 | 15 |
lower respiratory tract | 5.39e-09 | 15 |
trachea | 2.33e-08 | 7 |
respiratory airway | 2.33e-08 | 7 |
urothelium | 2.34e-08 | 5 |
foregut | 3.27e-08 | 87 |
gingival epithelium | 3.93e-08 | 3 |
lower respiratory tract epithelium | 4.42e-08 | 3 |
epithelium of bronchus | 4.42e-08 | 3 |
gland of gut | 6.89e-08 | 10 |
subdivision of head | 1.57e-07 | 49 |
subdivision of digestive tract | 5.10e-07 | 118 |
skin epidermis | 5.21e-07 | 15 |
outer epithelium | 5.21e-07 | 15 |
enveloping layer of ectoderm | 5.21e-07 | 15 |
transitional epithelium | 6.14e-07 | 6 |