FFCP PHASE1:Hg19::chr12:81273421..81273425,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr12:81273421..81273425,- | |||
|coexpression_cluster_id=C2243 | |coexpression_cluster_id=C2243 | ||
|description=CAGE_peak_at_chr12:81273421..81273425,- | |description=CAGE_peak_at_chr12:81273421..81273425,- | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!9.45e-20!115;UBERON:0001049!1.72e-19!57;UBERON:0005068!1.72e-19!57;UBERON:0006241!1.72e-19!57;UBERON:0007135!1.72e-19!57;UBERON:0002780!8.80e-19!41;UBERON:0001890!8.80e-19!41;UBERON:0006240!8.80e-19!41;UBERON:0002616!1.75e-18!59;UBERON:0002346!4.69e-18!90;UBERON:0003080!4.78e-18!42;UBERON:0000955!8.26e-16!69;UBERON:0006238!8.26e-16!69;UBERON:0001869!1.33e-15!32;UBERON:0003075!1.42e-15!86;UBERON:0007284!1.42e-15!86;UBERON:0001017!2.42e-15!82;UBERON:0001893!3.85e-15!34;UBERON:0002020!3.95e-15!34;UBERON:0003528!3.95e-15!34;UBERON:0000073!9.43e-15!94;UBERON:0001016!9.43e-15!94;UBERON:0002791!1.21e-14!33;UBERON:0005743!1.37e-14!86;UBERON:0000956!2.30e-14!25;UBERON:0000203!2.30e-14!25;UBERON:0003056!6.70e-13!61;UBERON:0002619!1.63e-12!22;UBERON:0001950!7.59e-11!20;UBERON:0000033!1.23e-10!123;UBERON:0000153!2.29e-09!129;UBERON:0007811!2.29e-09!129;UBERON:0000924!2.60e-09!173;UBERON:0006601!2.60e-09!173;UBERON:0004121!7.72e-08!169;UBERON:0000178!4.73e-07!15;UBERON:0000179!4.73e-07!15;UBERON:0000463!4.73e-07!15 | |ontology_enrichment_uberon=UBERON:0007023!9.45e-20!115;UBERON:0001049!1.72e-19!57;UBERON:0005068!1.72e-19!57;UBERON:0006241!1.72e-19!57;UBERON:0007135!1.72e-19!57;UBERON:0002780!8.80e-19!41;UBERON:0001890!8.80e-19!41;UBERON:0006240!8.80e-19!41;UBERON:0002616!1.75e-18!59;UBERON:0002346!4.69e-18!90;UBERON:0003080!4.78e-18!42;UBERON:0000955!8.26e-16!69;UBERON:0006238!8.26e-16!69;UBERON:0001869!1.33e-15!32;UBERON:0003075!1.42e-15!86;UBERON:0007284!1.42e-15!86;UBERON:0001017!2.42e-15!82;UBERON:0001893!3.85e-15!34;UBERON:0002020!3.95e-15!34;UBERON:0003528!3.95e-15!34;UBERON:0000073!9.43e-15!94;UBERON:0001016!9.43e-15!94;UBERON:0002791!1.21e-14!33;UBERON:0005743!1.37e-14!86;UBERON:0000956!2.30e-14!25;UBERON:0000203!2.30e-14!25;UBERON:0003056!6.70e-13!61;UBERON:0002619!1.63e-12!22;UBERON:0001950!7.59e-11!20;UBERON:0000033!1.23e-10!123;UBERON:0000153!2.29e-09!129;UBERON:0007811!2.29e-09!129;UBERON:0000924!2.60e-09!173;UBERON:0006601!2.60e-09!173;UBERON:0004121!7.72e-08!169;UBERON:0000178!4.73e-07!15;UBERON:0000179!4.73e-07!15;UBERON:0000463!4.73e-07!15 | ||
|ontology_enrichment_uberon_v019=UBERON:0002619;1.29e-18;22!UBERON:0001950;1.10e-16;20!UBERON:0000956;2.99e-16;25!UBERON:0000203;2.99e-16;25!UBERON:0002791;8.48e-11;32!UBERON:0001869;1.06e-10;32!UBERON:0001876;3.32e-10;2!UBERON:0003528;2.44e-09;34!UBERON:0002020;2.44e-09;34!UBERON:0002021;2.46e-09;5!UBERON:0001893;4.62e-09;34!UBERON:0000349;7.27e-09;5!UBERON:0002780;7.72e-09;41!UBERON:0001890;7.72e-09;41 | |ontology_enrichment_uberon_v019=UBERON:0002619;1.29e-18;22!UBERON:0001950;1.10e-16;20!UBERON:0000956;2.99e-16;25!UBERON:0000203;2.99e-16;25!UBERON:0002791;8.48e-11;32!UBERON:0001869;1.06e-10;32!UBERON:0001876;3.32e-10;2!UBERON:0003528;2.44e-09;34!UBERON:0002020;2.44e-09;34!UBERON:0002021;2.46e-09;5!UBERON:0001893;4.62e-09;34!UBERON:0000349;7.27e-09;5!UBERON:0002780;7.72e-09;41!UBERON:0001890;7.72e-09;41 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002619,1.26e-18,22;UBERON:0001950,1.15e-16,20;UBERON:0000956,2.94e-16,25;UBERON:0000203,2.94e-16,25;UBERON:0002791,2.08e-12,32;UBERON:0001869,2.08e-12,32;UBERON:0003528,1.36e-11,34;UBERON:0002020,1.36e-11,34;UBERON:0001893,1.36e-11,34;UBERON:0002780,1.77e-11,41;UBERON:0001890,1.77e-11,41;UBERON:0003080,1.77e-11,41;UBERON:0006240,1.77e-11,41;UBERON:0001876,1.06e-10,2;UBERON:0000073,3.11e-10,53;UBERON:0002616,3.11e-10,53;UBERON:0001049,1.44e-09,56;UBERON:0005068,1.44e-09,56;UBERON:0006241,1.44e-09,56;UBERON:0007135,1.44e-09,56;UBERON:0002021,2.97e-09,5;UBERON:0000349,3.41e-09,5;UBERON:0003056,1.55e-08,61;UBERON:0001016,2.83e-08,89;UBERON:0002346,9.56e-08,86;UBERON:0000955,2.38e-07,68;UBERON:0006238,2.38e-07,68;UBERON:0003075,5.83e-07,82;UBERON:0007284,5.83e-07,82;UBERON:0001017,6.05e-07,81 | |||
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| ||
|short_description=p@chr12:81273421..81273425,- | |short_description=p@chr12:81273421..81273425,- | ||
}} | }} |
Latest revision as of 12:49, 24 July 2015
Short description: | p@chr12:81273421..81273425, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:81273421..81273425, - |
Coexpression cluster: | C2243_extraskeletal_pineal_Neutrophils_cerebellum_small_large_Prostate |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
regional part of cerebral cortex | 1.26e-18 | 22 |
neocortex | 1.15e-16 | 20 |
cerebral cortex | 2.94e-16 | 25 |
pallium | 2.94e-16 | 25 |
regional part of telencephalon | 2.08e-12 | 32 |
cerebral hemisphere | 2.08e-12 | 32 |
brain grey matter | 1.36e-11 | 34 |
gray matter | 1.36e-11 | 34 |
telencephalon | 1.36e-11 | 34 |
regional part of forebrain | 1.77e-11 | 41 |
forebrain | 1.77e-11 | 41 |
anterior neural tube | 1.77e-11 | 41 |
future forebrain | 1.77e-11 | 41 |
amygdala | 1.06e-10 | 2 |
regional part of nervous system | 3.11e-10 | 53 |
regional part of brain | 3.11e-10 | 53 |
neural tube | 1.44e-09 | 56 |
neural rod | 1.44e-09 | 56 |
future spinal cord | 1.44e-09 | 56 |
neural keel | 1.44e-09 | 56 |
occipital lobe | 2.97e-09 | 5 |
limbic system | 3.41e-09 | 5 |
pre-chordal neural plate | 1.55e-08 | 61 |
nervous system | 2.83e-08 | 89 |
neurectoderm | 9.56e-08 | 86 |
brain | 2.38e-07 | 68 |
future brain | 2.38e-07 | 68 |
neural plate | 5.83e-07 | 82 |
presumptive neural plate | 5.83e-07 | 82 |
central nervous system | 6.05e-07 | 81 |