FFCP PHASE1:Hg19::chr17:39913783..39913800,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr17:39913783..39913800,- | |||
|coexpression_cluster_id=C1433 | |coexpression_cluster_id=C1433 | ||
|description=CAGE_peak_at_chr17:39913783..39913800,- | |description=CAGE_peak_at_chr17:39913783..39913800,- | ||
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|ontology_enrichment_celltype=CL:0000066!2.51e-30!254;CL:0000223!1.25e-12!59;CL:0002076!2.70e-12!43 | |ontology_enrichment_celltype=CL:0000066!2.51e-30!254;CL:0000223!1.25e-12!59;CL:0002076!2.70e-12!43 | ||
|ontology_enrichment_celltype_v019=CL:0002231;3.99e-10;3!CL:0000622;8.16e-10;5!CL:0002076;4.66e-09;42!CL:0000154;3.53e-08;6!CL:0002159;9.65e-08;14!CL:0000575;1.01e-07;2!CL:0000244;1.15e-07;4!CL:0000731;1.15e-07;4!CL:0002368;1.23e-07;13!CL:0000317;2.88e-07;2!CL:1000448;2.88e-07;2!CL:0002308;2.88e-07;2!CL:0002140;2.88e-07;2!CL:0002262;4.99e-07;2!CL:1000398;4.99e-07;2 | |ontology_enrichment_celltype_v019=CL:0002231;3.99e-10;3!CL:0000622;8.16e-10;5!CL:0002076;4.66e-09;42!CL:0000154;3.53e-08;6!CL:0002159;9.65e-08;14!CL:0000575;1.01e-07;2!CL:0000244;1.15e-07;4!CL:0000731;1.15e-07;4!CL:0002368;1.23e-07;13!CL:0000317;2.88e-07;2!CL:1000448;2.88e-07;2!CL:0002308;2.88e-07;2!CL:0002140;2.88e-07;2!CL:0002262;4.99e-07;2!CL:1000398;4.99e-07;2 | ||
|ontology_enrichment_celltype_v019_2=CL:0000066,6.46e-21,253;CL:0002076,2.62e-12,42;CL:0000223,1.34e-10,58;CL:0002231,1.99e-10,3;CL:0000622,1.79e-09,5;CL:0000154,6.71e-08,6;CL:0000244,7.61e-08,4;CL:0000731,7.61e-08,4;CL:0000575,9.52e-08,2;CL:0002159,1.10e-07,14;CL:0002368,1.75e-07,13;CL:0000317,4.39e-07,2;CL:1000448,4.39e-07,2;CL:0002308,4.39e-07,2;CL:0002140,4.39e-07,2;CL:0002262,4.95e-07,2;CL:1000398,4.95e-07,2 | |||
|ontology_enrichment_development_v019=CL:0000223;3.46e-07;58 | |ontology_enrichment_development_v019=CL:0000223;3.46e-07;58 | ||
|ontology_enrichment_disease=DOID:305!1.17e-11!106;DOID:0050687!2.20e-08!143 | |ontology_enrichment_disease=DOID:305!1.17e-11!106;DOID:0050687!2.20e-08!143 | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004119!2.01e-12!169;UBERON:0000925!2.01e-12!169;UBERON:0006595!2.01e-12!169;UBERON:0004921!2.20e-09!129;UBERON:0004185!2.20e-09!129;UBERON:0001007!2.97e-09!155;UBERON:0001555!2.97e-09!155;UBERON:0007026!2.97e-09!155;UBERON:0000077!5.94e-09!130;UBERON:0001737!1.72e-08!9;UBERON:0006554!1.94e-08!44;UBERON:0001008!5.18e-08!45;UBERON:0000065!2.30e-07!53;UBERON:0001004!3.97e-07!72;UBERON:0000072!6.58e-07!46;UBERON:0005911!8.50e-07!82 | |ontology_enrichment_uberon=UBERON:0004119!2.01e-12!169;UBERON:0000925!2.01e-12!169;UBERON:0006595!2.01e-12!169;UBERON:0004921!2.20e-09!129;UBERON:0004185!2.20e-09!129;UBERON:0001007!2.97e-09!155;UBERON:0001555!2.97e-09!155;UBERON:0007026!2.97e-09!155;UBERON:0000077!5.94e-09!130;UBERON:0001737!1.72e-08!9;UBERON:0006554!1.94e-08!44;UBERON:0001008!5.18e-08!45;UBERON:0000065!2.30e-07!53;UBERON:0001004!3.97e-07!72;UBERON:0000072!6.58e-07!46;UBERON:0005911!8.50e-07!82 | ||
|ontology_enrichment_uberon_v019=UBERON:0001737;2.58e-25;9!UBERON:0001557;2.58e-25;9!UBERON:0000065;8.92e-11;44!UBERON:0000072;6.76e-10;37!UBERON:0002419;2.88e-07;2!UBERON:0007771;2.88e-07;2!UBERON:0003297;2.88e-07;2!UBERON:0001821;2.88e-07;2!UBERON:0003487;2.88e-07;2!UBERON:0001820;2.88e-07;2!UBERON:0001281;4.99e-07;2!UBERON:0003497;4.99e-07;2!UBERON:0003909;4.99e-07;2!UBERON:0003835;4.99e-07;2 | |ontology_enrichment_uberon_v019=UBERON:0001737;2.58e-25;9!UBERON:0001557;2.58e-25;9!UBERON:0000065;8.92e-11;44!UBERON:0000072;6.76e-10;37!UBERON:0002419;2.88e-07;2!UBERON:0007771;2.88e-07;2!UBERON:0003297;2.88e-07;2!UBERON:0001821;2.88e-07;2!UBERON:0003487;2.88e-07;2!UBERON:0001820;2.88e-07;2!UBERON:0001281;4.99e-07;2!UBERON:0003497;4.99e-07;2!UBERON:0003909;4.99e-07;2!UBERON:0003835;4.99e-07;2 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,6.75e-26,9;UBERON:0001557,3.42e-14,19;UBERON:0004119,8.83e-13,160;UBERON:0000925,8.83e-13,160;UBERON:0006595,8.83e-13,160;UBERON:0000065,2.79e-10,54;UBERON:0008947,3.36e-10,38;UBERON:0003258,3.36e-10,38;UBERON:0001004,1.01e-09,74;UBERON:0001041,1.45e-09,87;UBERON:0004921,3.22e-09,118;UBERON:0000072,3.60e-09,47;UBERON:0001007,5.68e-08,145;UBERON:0001555,5.68e-08,145;UBERON:0007026,5.68e-08,145;UBERON:0002419,4.39e-07,2;UBERON:0007771,4.39e-07,2;UBERON:0003297,4.39e-07,2;UBERON:0001821,4.39e-07,2;UBERON:0003487,4.39e-07,2;UBERON:0001820,4.39e-07,2;UBERON:0005089,4.39e-07,2;UBERON:0005088,4.39e-07,2;UBERON:0001281,4.95e-07,2;UBERON:0003497,4.95e-07,2;UBERON:0003909,4.95e-07,2;UBERON:0003835,4.95e-07,2;UBERON:0006554,8.25e-07,47 | |||
|phase1_expression=0.181678379270557,0,0,0,0,0,0,0,0,0.737201809504527,6.28021051175185,0.436882744260345,0.791300934685361,0.37129905888014,0.331397375727916,0,0,0,0,0,0.612002073732759,0,0,0.273748850145768,0,0.382067028739756,0.410502947249729,0.236132343941038,0,0,0.154816123316076,0.919421224478927,2.10844143144775,1.10926203050036,0.0774672005803016,0,0,0,0.802177789880567,0,0,0,0,0,0,0.242584061187816,0.232429036905685,0,0.309706370895104,0,0,0,0,0,0,0,0.272906150057846,0,0,0,0,0,0.199463657621632,0,0.290209238628584,0,0,0,0,0.217188844705117,0,0.736555271975129,0,0,0,0,0.112328631146495,0.150176892841506,0,0,0,0.182664153764634,0,0,0,0,0,0,0,0,0.569212969109448,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0,0,0,0,0.443458794925128,0.527008714158756,0.0654895377488563,3.64295288292542,4.07862887062872,0,0,0.26591592103773,0,0,0,0.39752481473341,0,0,0,0.838998872419812,1.6507082516404,0.208994966536811,0.516833518338658,0.35576626268671,0.66944122552934,1.20848795132744,0,2.92874469057803,0.367663080345869,0,0.535798369704479,0.22452937262617,0,0,0,0.366403487860815,0,0,3.05265836499774,0,0.12663051166458,0,0,0.354668382198357,0,0,0.74000264525148,0.311211035399766,0.404132016209064,0.163461903113459,0.454072282934794,0,0,0,0,0,0,0,0.140450806702248,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113432183160021,0.179389635688862,0,0,0,0,0,0.18611685633159,0,0,0,0,0,0,0,0,0.386521706326594,0.272746120590835,0,0.365921118388786,0.132529768321485,0.116193942869518,0.10366105501537,0.504641701751257,0,0,0,0,0,0,2.12952240071719,3.20310911148393,1.44606617930089,2.09558548191549,1.96091499683166,1.42362371466658,1.48314438976181,1.37355025587742,1.92373578473195,2.21446636387394,1.40241773803446,0,0,0,0,0.590789906681404,0,0.368965315629341,0.171567810298526,3.62175941848464,0,2.31216636546751,1.20364978706088,0,0,1.44331342025273,0.115930404975077,0.117408694235822,0.577465791044295,0,0.380508304469197,1.58040879591855,3.43394464837949,0,0,0,0,0.671928512795438,0.567100388969546,0.447792613514241,0.581267877027924,0.383382679165211,0,0.264145302039678,0.207328115540772,1.15295962733569,0.6312121671319,0,0.381988425558278,0,0,0,0,0,0.112131084345361,0.87192013766656,0.07333828582095,0,0,0,0.797814349754612,0,0,0,0.266422179016099,0.142977993658148,0,0,0,0.355391948742546,0,0,0,0.799783929456456,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.773288812777695,0,0,0,0,0,0,1.50051156317903,0,0,0,0,0,0,0,0,0,0,0.0868836144680828,0.391602314925481,0,0,0.215714200818617,0,0.909382714338778,1.66435439510497,1.81434175997808,0,0,0,0,0,0,0,0,0,0,1.03850885836724,0,1.93375119346596,6.01519410909855,2.5782676902051,0.229628896329213,0.546273504020151,0.786746489756545,1.35359883872224,0.616122696835318,0.784349769176855,0,0.73886140225013,0,1.02056223165909,0,1.54227252690289,0,0,0,0.831076008928724,0.223874754722178,0,0,0,0.328014645699706,0,0.103041011647722,0.0915694648183434,0,1.14853107599234,9.75090369054782,0,0,0,0,0,0,0,0,0.0890320356467374,1.65284915360978,0.768760269460425,0,2.2254711788221,0,0.31481234683064,0,0,0,0,0.37064843820784,0,0,0,0,0,0,0,0,0,0,0,0.202182481573316,0,0,0,0,0,0,0.282810863907425,0,0,0.66343897524122,0.876901770507525,0,0,0,0.30982349809975,0,0,0,1.07001315444375,0.354761064070598,0,0,0,0,0.192444225451024,1.34060455107157,1.08890984861323,0.188287601553558,2.58303223602738,1.68471475667626,5.32116184244011,0.229723400206959,0,0,0,0,0,0,0,0.79312517629427,0.213648142254946,0.962479855263359,0.490080431962063,0,0,0.0711418433484141,0,0.798317485731266,0,0.211673582723883,0,0.280797178113459,0,0,0,0.338583555603207,0.1605880751037,0,0,0,0,0,0,0.19538809540204,0,0,0,0,0,0,0,0,0.222886768554957,0,1.90995587790152,0,0.921482106297696,0,0.140669416410513,0,0,0.422250816255987,0.19924798825107,0.276283915531148,0,0,0,0,0.269605053441981,0,0,0.197286811273867,0,0,0,0,0,0.7812832832557,0.0874599999961957,0,0.682760689712998,0.508507300585533,0.709163045303809,0.344743373241465,0,0,0,0.120596438625408,0,0,0,0,0.21787692703798,1.25481369850743,0.538651809526579,0,0.69169171316418,1.34636466614658,0.54323685961004,0,0.366390373607449,1.5991043280559,0,0.156980256395025,0.332423363800313,0.451191321234361,0.392125068635479,0.167821586975843,0,0,1.05499032264014,0.326465616318295,0.282706142867882,0,0,0.0884575645033392,0,0,0,0,0.067401132980677,0,0,0,0.391329237864179,0,0,1.20990716048664,0.61214552326098,0.063186579628488,0,0.103688191397247,0,0,0,0,0.569219092059585,0.138674673013139,1.38847790668105,0.489961987071888,0.261177619741208,0.34945333648406,0,0.580537987734511,0.365446585430928,0.574808199372465,1.35784623083787,0,0,0,0,0,0.782205530939212,0,0.213452994739353,0.39961921916426,0,0,0.686379991447858,0.432164393964449,0.124252535565433,2.12124631155116,0,0,0,0,0,0.136905378891993,0,0,0.525774708558629,0.837847203816763,0,0,1.79711100449092,0,0.446342914883745,0.335917362433631,0,0,0.157566364614447,0.0824158583811665,0.0674035438541849,0.196854963029498,0,0,0,0.160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| ||
|short_description=p@chr17:39913783..39913800,- | |short_description=p@chr17:39913783..39913800,- | ||
}} | }} |
Latest revision as of 16:49, 25 July 2015
Short description: | p@chr17:39913783..39913800, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:39913783..39913800, - |
Coexpression cluster: | C1433_Alveolar_Sebocyte_Keratinocyte_Corneal_Renal_Urothelial_Prostate |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 6.46e-21 | 253 |
endo-epithelial cell | 2.62e-12 | 42 |
endodermal cell | 1.34e-10 | 58 |
epithelial cell of prostate | 1.99e-10 | 3 |
acinar cell | 1.79e-09 | 5 |
protein secreting cell | 6.71e-08 | 6 |
transitional epithelial cell | 7.61e-08 | 4 |
urothelial cell | 7.61e-08 | 4 |
corneal epithelial cell | 9.52e-08 | 2 |
general ecto-epithelial cell | 1.10e-07 | 14 |
respiratory epithelial cell | 1.75e-07 | 13 |
sebum secreting cell | 4.39e-07 | 2 |
epithelial cell of sweat gland | 4.39e-07 | 2 |
epithelial cell of skin gland | 4.39e-07 | 2 |
acinar cell of sebaceous gland | 4.39e-07 | 2 |
endothelial cell of sinusoid | 4.95e-07 | 2 |
endothelial cell of hepatic sinusoid | 4.95e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
larynx | 6.75e-26 | 9 |
upper respiratory tract | 3.42e-14 | 19 |
endoderm-derived structure | 8.83e-13 | 160 |
endoderm | 8.83e-13 | 160 |
presumptive endoderm | 8.83e-13 | 160 |
respiratory tract | 2.79e-10 | 54 |
respiratory primordium | 3.36e-10 | 38 |
endoderm of foregut | 3.36e-10 | 38 |
respiratory system | 1.01e-09 | 74 |
foregut | 1.45e-09 | 87 |
subdivision of digestive tract | 3.22e-09 | 118 |
segment of respiratory tract | 3.60e-09 | 47 |
digestive system | 5.68e-08 | 145 |
digestive tract | 5.68e-08 | 145 |
primitive gut | 5.68e-08 | 145 |
skin gland | 4.39e-07 | 2 |
epidermis gland | 4.39e-07 | 2 |
gland of integumental system | 4.39e-07 | 2 |
sebaceous gland | 4.39e-07 | 2 |
skin sebaceous gland | 4.39e-07 | 2 |
sweat gland | 4.39e-07 | 2 |
sweat gland placode | 4.39e-07 | 2 |
sebaceous gland placode | 4.39e-07 | 2 |
hepatic sinusoid | 4.95e-07 | 2 |
abdomen blood vessel | 4.95e-07 | 2 |
sinusoid | 4.95e-07 | 2 |
abdominal segment blood vessel | 4.95e-07 | 2 |
urinary system structure | 8.25e-07 | 47 |