FFCP PHASE1:Hg19::chr1:223537475..223537547,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr1:223537475..223537547,-
|short_description=p1@SUSD4
|description=CAGE_peak_1_at_SUSD4_5end
|association_with_transcript=0bp_to_ENST00000271787,ENST000003440...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=55061 | |EntrezGene=55061 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25470 | |HGNC=25470 | ||
|TSSclassifier=strong | |||
|UniProt=Q5VX72,Q5VX71,B7Z369,B3KTY0 | |UniProt=Q5VX72,Q5VX71,B7Z369,B3KTY0 | ||
|association_with_transcript=0bp_to_ENST00000271787,ENST00000344029,ENST00000366877,ENST00000366878,ENST00000494793,ENST00000542750,NM_001037175,NM_017982,uc001hny.3,uc001hnz.2,uc010puw.1,uc010pux.1_5end | |||
|cluster_id=chr1:223537475..223537547,- | |||
|coexpression_cluster_id=C3 | |||
|description=CAGE_peak_1_at_SUSD4_5end | |||
|id=chr1:223537475..223537547,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;1.51e-16;82!UBERON:0002532;5.75e-07;206!UBERON:0010316;5.75e-07;206 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!7.22e-51!115;UBERON:0001049!1.34e-35!57;UBERON:0005068!1.34e-35!57;UBERON:0006241!1.34e-35!57;UBERON:0007135!1.34e-35!57;UBERON:0001017!1.50e-32!82;UBERON:0005743!1.04e-30!86;UBERON:0000073!2.08e-29!94;UBERON:0001016!2.08e-29!94;UBERON:0003080!5.20e-29!42;UBERON:0002780!7.10e-29!41;UBERON:0001890!7.10e-29!41;UBERON:0006240!7.10e-29!41;UBERON:0002616!1.03e-28!59;UBERON:0000955!2.74e-28!69;UBERON:0006238!2.74e-28!69;UBERON:0002346!3.09e-26!90;UBERON:0003075!8.98e-26!86;UBERON:0007284!8.98e-26!86;UBERON:0001893!1.62e-23!34;UBERON:0002020!2.05e-23!34;UBERON:0003528!2.05e-23!34;UBERON:0002791!1.11e-22!33;UBERON:0001869!1.47e-22!32;UBERON:0003056!2.57e-19!61;UBERON:0002619!1.33e-18!22;UBERON:0000956!3.92e-17!25;UBERON:0000203!3.92e-17!25;UBERON:0001950!6.66e-17!20;UBERON:0000153!1.13e-16!129;UBERON:0007811!1.13e-16!129;UBERON:0000033!3.63e-15!123;UBERON:0000924!1.32e-14!173;UBERON:0006601!1.32e-14!173;UBERON:0004121!4.84e-14!169;UBERON:0002420!4.60e-08!9;UBERON:0007245!4.60e-08!9;UBERON:0010009!4.60e-08!9;UBERON:0010011!4.60e-08!9;UBERON:0000454!4.60e-08!9;UBERON:0003076!7.46e-08!15;UBERON:0003057!7.46e-08!15;UBERON:0002308!9.57e-08!9;UBERON:0000125!9.57e-08!9;UBERON:0001871!1.67e-07!7;UBERON:0000025!4.70e-07!194;UBERON:0001894!8.79e-07!7;UBERON:0006222!8.79e-07!7;UBERON:0004732!9.03e-07!13 | |||
|ontology_enrichment_uberon_v019=UBERON:0002780;2.47e-29;41!UBERON:0001890;2.47e-29;41!UBERON:0001869;4.83e-28;32!UBERON:0001893;7.70e-28;34!UBERON:0003528;1.19e-27;34!UBERON:0002020;1.19e-27;34!UBERON:0002791;1.90e-27;32!UBERON:0002619;2.60e-27;22!UBERON:0000073;8.06e-26;53!UBERON:0002616;8.06e-26;53!UBERON:0001950;9.62e-25;20!UBERON:0000956;4.37e-23;25!UBERON:0000203;4.37e-23;25!UBERON:0001017;4.15e-17;75!UBERON:0000955;6.15e-17;68!UBERON:0007023;3.23e-15;114!UBERON:0001016;1.41e-14;83!UBERON:0002420;2.64e-11;9!UBERON:0007245;2.64e-11;9!UBERON:0010009;2.64e-11;9!UBERON:0010011;2.64e-11;9!UBERON:0000454;2.64e-11;9!UBERON:0000125;8.00e-11;9!UBERON:0002308;8.00e-11;9!UBERON:0001894;1.86e-09;7!UBERON:0001871;2.11e-09;6!UBERON:0009663;7.36e-09;7!UBERON:0000200;1.02e-08;6!UBERON:0000349;6.57e-08;5!UBERON:0004732;9.45e-08;13!UBERON:0002298;4.21e-07;6!UBERON:0001872;5.06e-07;5!UBERON:0011216;5.10e-07;132!UBERON:0004733;5.25e-07;12!UBERON:0002028;5.25e-07;12!UBERON:0002021;9.66e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.20e-56,114;UBERON:0001049,1.43e-48,56;UBERON:0005068,1.43e-48,56;UBERON:0006241,1.43e-48,56;UBERON:0007135,1.43e-48,56;UBERON:0000073,6.14e-46,53;UBERON:0002616,6.14e-46,53;UBERON:0002780,1.01e-40,41;UBERON:0001890,1.01e-40,41;UBERON:0003080,1.01e-40,41;UBERON:0006240,1.01e-40,41;UBERON:0001017,4.65e-39,81;UBERON:0001016,7.54e-37,89;UBERON:0000955,2.78e-36,68;UBERON:0006238,2.78e-36,68;UBERON:0002346,4.45e-35,86;UBERON:0003075,8.60e-35,82;UBERON:0007284,8.60e-35,82;UBERON:0001893,1.18e-32,34;UBERON:0003528,1.66e-32,34;UBERON:0002020,1.66e-32,34;UBERON:0001869,3.41e-31,32;UBERON:0002791,1.80e-30,32;UBERON:0002619,2.76e-27,22;UBERON:0003056,2.30e-26,61;UBERON:0010371,1.82e-25,104;UBERON:0001950,1.03e-24,20;UBERON:0000956,4.61e-23,25;UBERON:0000203,4.61e-23,25;UBERON:0004121,1.51e-21,171;UBERON:0000924,1.51e-21,171;UBERON:0006601,1.51e-21,171;UBERON:0011216,2.60e-21,223;UBERON:0010314,4.35e-20,132;UBERON:0000025,3.63e-13,192;UBERON:0004111,6.26e-13,240;UBERON:0002420,2.27e-11,9;UBERON:0007245,2.27e-11,9;UBERON:0010009,2.27e-11,9;UBERON:0010011,2.27e-11,9;UBERON:0000454,2.27e-11,9;UBERON:0000125,6.82e-11,9;UBERON:0002308,6.82e-11,9;UBERON:0001894,1.91e-09,7;UBERON:0006222,1.91e-09,7;UBERON:0001871,2.18e-09,6;UBERON:0003076,2.61e-09,15;UBERON:0003057,2.61e-09,15;UBERON:0009663,6.34e-09,7;UBERON:0000200,1.02e-08,6;UBERON:0000349,6.52e-08,5;UBERON:0004732,9.84e-08,13;UBERON:0002298,4.32e-07,6;UBERON:0004733,5.36e-07,12;UBERON:0002028,5.36e-07,12;UBERON:0007277,5.36e-07,12;UBERON:0001872,5.67e-07,5;UBERON:0002021,8.87e-07,5 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.246242116153576,0,0.626909442956176,0.286235987131057,0.410623275218653,0,0.152826811495903,0.246301768349837,0.472264687882075,0.786728553697808,0.383829398097213,0.309632246632152,0,0,0,0,0,0,0,0.200544447470142,0.434021741431704,0,0,0,0.145398238779565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320929027076094,0,0.329851300186716,0,0.426224750532694,0,0.56738522469114,0,0,0.521482918420201,0,0.605399502633369,0,0,0,0,0.419317291016752,0,0,0,0,0.19891667719909,0,0,0.546138611262131,0,0,0,0,0,0,0,0,0,0,0,0,4.13090517239049,3.93010762749165,4.11202997999018,0,5.21475626613745,3.78758244587787,7.79306913631645,0,0.589211814949674,1.77227115666897,1.08321545506006,0.128091319725675,0,1.64437904603676,2.48715016007264,0.869409257205157,3.85545064221357,1.07016331235885,1.04535523804977,0.566546713487831,3.83220493601921,2.06176467289578,3.28925599625354,2.54852331459277,0,0.950452044448374,0.903450714466637,1.27986611154418,2.49861453104692,1.18388626022008,0.821127996921047,1.00803371612366,0.534880391567015,1.15859523106239,0,0,0,0,0,0.144846518960824,5.5670016293577,1.94653948121054,1.22895262313288,0.443458794925128,0.087834785693126,6.61444331263449,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.354668382198357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179389635688862,0,0,0,0.103052529238439,0,0.18611685633159,0.168776332241266,0.0974370051611986,0,0,0,0.710019185033229,0.10075209822764,0.169560592310488,0,0,0,0.487894824518382,0.530119073285941,0.116193942869518,0.621966330092223,0,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.53510069643662,10.8110993834539,8.86184860022106,3.5317047953172,0.245976877086227,0.171567810298526,0.219500570817251,0,0,0,0,0,0,0.811512834825538,0,0,0,0,7.90204397959275,11.1603201072333,0,0,0,0,0.16798212819886,0,0,0,0,0,0,0.207328115540772,0,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301439377059586,0,0.299918973546171,0,0,0,0,0,0,0.144781306667579,0,0,0,0.394061520403854,1.2937654491571,1.28343036279748,4.57370323600434,6.50699269288109,5.41302168944387,1.17261385734044,0.637938751653163,0,0,0,0,0,0,0,0,0,0,0.300946099727719,0,0,0.664225598535437,0.184369168541703,0,0.195801157462741,0.343143423810856,1.44737618286021,1.50999940573032,0.426910231213777,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.81289174387433,0.200506470303285,0.276242966807689,0,0,0,0.451199612907412,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309123034943167,3.93748698718877,1.98022799809411,0,0,0,0.096670718292122,0,0,0,0,0,0,1.51354460599453,0,0,0,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318203247925937,0,0,0,0,0,0,0,0,0.243713489631284,0,0,0,0,0,0,0,0,0,0,0.6196469961995,0,0,0,0,0,0.211107635297664,0,0,0,0,0.670302275535787,0,1.03558180854457,0,0,0,0,0,1.52927441428475,1.13929437434833,0.238231775457789,0,0.648473311192717,0,1.58625035258854,0,0.962479855263359,0,0,0,15.2243544765606,4.62336190913585,0,0,0,0,0,0,0.156679895773023,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.439524537815682,0,0.557216921387392,1.13654458722565,0,0.296964680832639,0,27.8361341374563,33.479321105702,0,0,0,1.59398390600856,0.276283915531148,3.52705846995986,0,0,0,0,0.358042349351218,0,0.789147245095469,0,0,19.3866549219044,15.8633447856766,7.98455192004777,2.08342208868187,6.64695999971087,0.724999575434793,2.04828206913899,1.27126825146383,0.236387681767936,11.7212746902098,0,1.73624994933292,26.5722415744152,56.5597297153163,9.15490417902499,21.4523764266576,8.86642856860643,23.2548520983211,0,4.46155981691531,3.61666214967846,0.113942055847001,0.23056390438806,0.179515288819544,0.108647371922008,0,0,0.533034776018635,1.02193298195737,0,0,0,0,0.167821586975843,0.189753732724185,0,2.10998064528027,3.59112177950125,6.07818207165946,0.865554558968364,0,0.619202951523374,0.611030144933625,0.889563386041866,0.494255755786011,0.626531697032732,7.27932236191312,3.21031058919516,19.6782134409285,0,4.10895699757388,0.728341138602278,9.86461007123476,8.46935012340647,6.1214552326098,0.695052375913368,0,0.103688191397247,0,0.330991955875499,0,0,3.13070500632772,0,1.21491816834592,1.37189356380129,1.48000651186684,9.78469342155369,0,0,0,0,19.0098472317302,0,2.93774963014692,0.274083849293502,0,30.3891820588218,0.977756913674015,2.48492342779755,1.28071796843612,1.19885765749278,0.864542502924636,0,0,0,0.124252535565433,0.471388069233591,0.135904206073614,0.104602846312333,0.305994652908965,0,13.8096666403252,5.33930977678773,0,0.429765441419957,0,3.6306712165393,6.64565229633883,1.43574604915363,2.99518500748487,5.57993862577542,2.4548860318606,3.29199015184959,0,17.4743924291181,0,0,0,0.984274815147488,0,79.5229689809303,33.6422413095592,0.160753148465019,0.412618309791701,0,0,0,33.0477588219654,11.0693446907758,6.54087370583345,7.29118775076474,0.316801009558219,0.179287339332845,0.383830394638891,3.57347663186684,4.63464379255802,0,0,0.864221491201268,0.326587360109409,0,0.164185041498678,0.681552087141687,0,6.155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| ||
|short_description=p1@SUSD4 | |||
}} | }} |
Latest revision as of 21:50, 15 September 2015
Short description: | p1@SUSD4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_SUSD4_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | 0bp_to_ENST00000271787, ENST00000344029, ENST00000366877, ENST00000366878, ENST00000494793, ENST00000542750, NM_001037175, NM_017982, uc001hny.3, uc001hnz.2, uc010puw.1, uc010pux.1_5end |
EntrezGene: | SUSD4 |
HGNC: | 25470 |
UniProt: | Q5VX72Q5VX71B7Z369B3KTY0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data