FFCP PHASE1:Hg19::chr1:161041679..161041684,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:161041679..161041684,- | |||
|description=CAGE_peak_at_chr1:161041679..161041684,- | |description=CAGE_peak_at_chr1:161041679..161041684,- | ||
|id=chr1:161041679..161041684,- | |id=chr1:161041679..161041684,- | ||
|ontology_enrichment_celltype=CL:0000066!8.82e-08!254;CL:0000039!1.51e-07!7;CL:0000586!1.51e-07!7;CL:0000349!2.62e-07!3;CL:0002577!2.62e-07!3;CL:0002541!9.88e-07!3 | |ontology_enrichment_celltype=CL:0000066!8.82e-08!254;CL:0000039!1.51e-07!7;CL:0000586!1.51e-07!7;CL:0000349!2.62e-07!3;CL:0002577!2.62e-07!3;CL:0002541!9.88e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0000349;2.86e-14;19!CL:0002537;4.11e-14;5!CL:0002541;5.80e-07;3!CL:0002577;8.86e-07;3 | |ontology_enrichment_celltype_v019=CL:0000349;2.86e-14;19!CL:0002537;4.11e-14;5!CL:0002541;5.80e-07;3!CL:0002577;8.86e-07;3 | ||
|ontology_enrichment_celltype_v019_2=CL:0000349,2.37e-14,19;CL:0002537,3.15e-14,5;CL:0002541,5.80e-07,3;CL:0002577,8.15e-07,3 | |||
|ontology_enrichment_development_v019=UBERON:0003124;4.08e-18;1 | |ontology_enrichment_development_v019=UBERON:0003124;4.08e-18;1 | ||
|ontology_enrichment_disease=DOID:305!1.58e-07!106;DOID:0050687!9.75e-07!143 | |ontology_enrichment_disease=DOID:305!1.58e-07!106;DOID:0050687!9.75e-07!143 | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005631!9.46e-17!14;UBERON:0000158!9.46e-17!14;UBERON:0003124!1.77e-14!7;UBERON:0004119!2.38e-10!169;UBERON:0000925!2.38e-10!169;UBERON:0006595!2.38e-10!169;UBERON:0001987!2.01e-09!4;UBERON:0004340!2.01e-09!4;UBERON:0000077!6.45e-09!130;UBERON:0000478!1.30e-08!24;UBERON:0000476!9.88e-07!3;UBERON:0000920!9.88e-07!3 | |ontology_enrichment_uberon=UBERON:0005631!9.46e-17!14;UBERON:0000158!9.46e-17!14;UBERON:0003124!1.77e-14!7;UBERON:0004119!2.38e-10!169;UBERON:0000925!2.38e-10!169;UBERON:0006595!2.38e-10!169;UBERON:0001987!2.01e-09!4;UBERON:0004340!2.01e-09!4;UBERON:0000077!6.45e-09!130;UBERON:0000478!1.30e-08!24;UBERON:0000476!9.88e-07!3;UBERON:0000920!9.88e-07!3 | ||
|ontology_enrichment_uberon_v019=UBERON:0001987;1.45e-17;4!UBERON:0000478;2.46e-17;24!UBERON:0005631;1.42e-15;10!UBERON:0000158;1.42e-15;10!UBERON:0000305;2.35e-10;7!UBERON:0003124;5.80e-07;3!UBERON:0000920;5.80e-07;3 | |ontology_enrichment_uberon_v019=UBERON:0001987;1.45e-17;4!UBERON:0000478;2.46e-17;24!UBERON:0005631;1.42e-15;10!UBERON:0000158;1.42e-15;10!UBERON:0000305;2.35e-10;7!UBERON:0003124;5.80e-07;3!UBERON:0000920;5.80e-07;3 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,1.02e-29,14;UBERON:0000158,1.02e-29,14;UBERON:0003124,3.98e-22,7;UBERON:0001987,1.33e-17,4;UBERON:0004340,1.33e-17,4;UBERON:0000478,2.07e-17,24;UBERON:0000305,1.94e-10,7;UBERON:0004871,3.01e-09,8;UBERON:0000995,1.09e-07,21;UBERON:0005795,2.31e-07,22;UBERON:0003975,2.31e-07,22;UBERON:0000920,5.80e-07,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.218441372130172,0.791300934685361,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0787107813136792,0,0,0,0.919421224478927,0,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.741568885568859,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149448680551801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193260853163297,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,0,0,0.109750285408626,0,0,0.277765335475589,0,0,0,0,0,0,0,0,0,0,0.246217006087397,0,0.594524649154913,0,0.16798212819886,0,0.179117045405697,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.303127571446259,1.66435439510497,0.604780586659361,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184161977871793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.824328093181778,0,0,0,0,0,0,0,0,0,0,0,0,0,0.165284915360978,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.281695602532241,0.143411352204052,0,0,0,0,0,0,0,0.288666338176536,0,0,1.31801321087491,0,1.68471475667626,0.443430153536676,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.43246690842614,0,1.84296421259539,0,0,0,0.16480387422676,0,0,0,0,0.102268682502155,0,0,0.0898683511473268,0,0,0.0986434056369336,0,0,0,0,0,0.260427761085233,0.262379999988587,0,0,0.508507300585533,0.472775363535873,0,0,0,0,0,0,0,0,0,0,1.25481369850743,0,0,1.1528195219403,0.897576444097721,0.54323685961004,0.31900115973192,0.0915975934018623,5.86338253620498,0,0,0,0,0,0,0,0,0.210998064528027,0.163232808159148,0,0,0,0,0,0,0,0,0,0,0,0,0.19566461893209,0,0,0,0,0.063186579628488,0,0.103688191397247,0,0,0,0,0.284609546029793,0,0,0,0,0.17472666824203,0.687944129886466,0,0,0,0.484945082442097,0,0,0,0,0,0.391102765469606,0,0,0,0,0,0,0,0,2.35694034616795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0787831823072236,0,0,0,0,0,0,0,0,0,0.2249738915515,0.77380195455795,0,0.335434687599266,0,0,0,0,0.191915197319445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106787412567695,0.157204305099666,0,0,0,0,0,0,0,0,0,0.314108192500469,0,0,0,0,0,0,0,0,0,0,0.235265819698172,0.468334905806882,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308801447160972,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.699397538597222,0.622077260032973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11796972334774,0,0.115525666150338,0,0,0,0,0.20170506870352,0,0.523813388962845,0,0.147856086217045,0,0,0,0,0,0.548257766857182,0,0,0.511049710558381,0,0,0,0,2.21755925406597,0,0,0,0,0,0.111231401892069,0,0,0.280272163313789,0,0,0,0,0,0,0,0,0,0,0,0.430227358820278,0,0,0.846774100381858,0.22910686854405,0,0,0.447421727191169,0,0.121917924982269,0,0,0,0.971421986118279,0,0,0,0,0,0,0,0,0,0,0,0.196308467114945,0,0,0,0,0,0.0999411559249289,3.03541695629618,1.41157948686277,0,0.730336388246517,0.458729283404541,0,0,0,0.436350690340377,0,0,0,0,0,0,0.126698501011437,0,0,0.275684698604535,0.250707539292375,0,0,0,0,0.213233981900981,0.23806443146374,0,0,0,0,0,0.217716747896961,0.684466602170562,0.336760265072938,0.143444410785353,0.332660356546013,0,0,0,0,0,0,0.406896178315738,0,0,0 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| ||
|short_description=p@chr1:161041679..161041684,- | |short_description=p@chr1:161041679..161041684,- | ||
}} | }} |
Latest revision as of 23:30, 27 July 2015
Short description: | p@chr1:161041679..161041684, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:161041679..161041684, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
extraembryonic cell | 2.37e-14 | 19 |
amnion mesenchymal stem cell | 3.15e-14 | 5 |
chorionic membrane mesenchymal stem cell | 5.80e-07 | 3 |
placental epithelial cell | 8.15e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 1.02e-29 | 14 |
membranous layer | 1.02e-29 | 14 |
chorion | 3.98e-22 | 7 |
placenta | 1.33e-17 | 4 |
allantois | 1.33e-17 | 4 |
extraembryonic structure | 2.07e-17 | 24 |
amnion | 1.94e-10 | 7 |
somatic layer of lateral plate mesoderm | 3.01e-09 | 8 |
uterus | 1.09e-07 | 21 |
embryonic uterus | 2.31e-07 | 22 |
internal female genitalia | 2.31e-07 | 22 |
egg chorion | 5.80e-07 | 3 |