FFCP PHASE1:Hg19::chr6:158724401..158724405,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr6:158724401..158724405,- | |||
|coexpression_cluster_id=C1345 | |coexpression_cluster_id=C1345 | ||
|description=CAGE_peak_at_chr6:158724401..158724405,- | |description=CAGE_peak_at_chr6:158724401..158724405,- | ||
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|ontology_enrichment_celltype=CL:0002563!8.23e-11!4;CL:0000181!8.38e-08!12;CL:0000417!8.38e-08!12;CL:0000668!8.38e-08!12;CL:0000414!8.38e-08!12;CL:0000412!8.38e-08!12;CL:0000182!8.38e-08!12 | |ontology_enrichment_celltype=CL:0002563!8.23e-11!4;CL:0000181!8.38e-08!12;CL:0000417!8.38e-08!12;CL:0000668!8.38e-08!12;CL:0000414!8.38e-08!12;CL:0000412!8.38e-08!12;CL:0000182!8.38e-08!12 | ||
|ontology_enrichment_celltype_v019=CL:0002563;1.92e-15;4!CL:0000182;2.92e-11;12!CL:0002253;1.73e-08;2 | |ontology_enrichment_celltype_v019=CL:0002563;1.92e-15;4!CL:0000182;2.92e-11;12!CL:0002253;1.73e-08;2 | ||
|ontology_enrichment_celltype_v019_2=CL:0002563,1.92e-15,4;CL:0000182,2.92e-11,12;CL:0000223,1.28e-08,58;CL:0002253,1.73e-08,2 | |||
|ontology_enrichment_development_v019=UBERON:0003104;3.64e-16;31!UBERON:0004161;3.13e-12;11!UBERON:0009497;1.93e-10;13 | |ontology_enrichment_development_v019=UBERON:0003104;3.64e-16;31!UBERON:0004161;3.13e-12;11!UBERON:0009497;1.93e-10;13 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005409!4.63e-16!35;UBERON:0000160!4.51e-12!27;UBERON:0001242!8.23e-11!4;UBERON:0001262!8.23e-11!4;UBERON:0004786!8.23e-11!4;UBERON:0004808!8.23e-11!4;UBERON:0001277!8.23e-11!4;UBERON:0003350!8.03e-09!5;UBERON:0004921!9.70e-09!129;UBERON:0004185!9.70e-09!129;UBERON:0001007!5.82e-07!155;UBERON:0001555!5.82e-07!155;UBERON:0007026!5.82e-07!155 | |ontology_enrichment_uberon=UBERON:0005409!4.63e-16!35;UBERON:0000160!4.51e-12!27;UBERON:0001242!8.23e-11!4;UBERON:0001262!8.23e-11!4;UBERON:0004786!8.23e-11!4;UBERON:0004808!8.23e-11!4;UBERON:0001277!8.23e-11!4;UBERON:0003350!8.03e-09!5;UBERON:0004921!9.70e-09!129;UBERON:0004185!9.70e-09!129;UBERON:0001007!5.82e-07!155;UBERON:0001555!5.82e-07!155;UBERON:0007026!5.82e-07!155 | ||
|ontology_enrichment_uberon_v019=UBERON:0000160;5.53e-20;17!UBERON:0005409;1.18e-15;22!UBERON:0001242;1.92e-15;4!UBERON:0001262;1.92e-15;4!UBERON:0004786;1.92e-15;4!UBERON:0004808;1.92e-15;4!UBERON:0001277;1.92e-15;4!UBERON:0002108;2.06e-12;4!UBERON:0004921;1.38e-09;33!UBERON:0000485;3.17e-09;7!UBERON:0003929;3.17e-09;7!UBERON:0003350;3.51e-08;8!UBERON:0001155;2.44e-07;9!UBERON:0002107;2.59e-07;19!UBERON:0006925;2.59e-07;19 | |ontology_enrichment_uberon_v019=UBERON:0000160;5.53e-20;17!UBERON:0005409;1.18e-15;22!UBERON:0001242;1.92e-15;4!UBERON:0001262;1.92e-15;4!UBERON:0004786;1.92e-15;4!UBERON:0004808;1.92e-15;4!UBERON:0001277;1.92e-15;4!UBERON:0002108;2.06e-12;4!UBERON:0004921;1.38e-09;33!UBERON:0000485;3.17e-09;7!UBERON:0003929;3.17e-09;7!UBERON:0003350;3.51e-08;8!UBERON:0001155;2.44e-07;9!UBERON:0002107;2.59e-07;19!UBERON:0006925;2.59e-07;19 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,5.64e-20,17;UBERON:0001242,1.92e-15,4;UBERON:0001262,1.92e-15,4;UBERON:0004786,1.92e-15,4;UBERON:0004808,1.92e-15,4;UBERON:0001277,1.92e-15,4;UBERON:0005409,7.61e-14,25;UBERON:0002108,2.12e-12,4;UBERON:0003929,2.80e-09,54;UBERON:0004921,7.44e-09,118;UBERON:0003350,3.51e-08,8;UBERON:0000485,2.29e-07,9;UBERON:0001155,2.44e-07,9;UBERON:0002107,2.59e-07,19;UBERON:0006925,2.59e-07,19;UBERON:0008836,2.59e-07,19;UBERON:0001007,4.90e-07,145;UBERON:0001555,4.90e-07,145;UBERON:0007026,4.90e-07,145 | |||
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|short_description=p@chr6:158724401..158724405,- | |short_description=p@chr6:158724401..158724405,- | ||
}} | }} |
Latest revision as of 21:26, 30 July 2015
Short description: | p@chr6:158724401..158724405, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr6:158724401..158724405, - |
Coexpression cluster: | C1345_Intestinal_Hepatocyte_small_testis_colon_Prostate_temporal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 1.92e-15 | 4 |
hepatocyte | 2.92e-11 | 12 |
endodermal cell | 1.28e-08 | 58 |
epithelial cell of large intestine | 1.73e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
intestine | 5.64e-20 | 17 |
intestinal mucosa | 1.92e-15 | 4 |
wall of intestine | 1.92e-15 | 4 |
gastrointestinal system mucosa | 1.92e-15 | 4 |
gastrointestinal system epithelium | 1.92e-15 | 4 |
intestinal epithelium | 1.92e-15 | 4 |
gastrointestinal system | 7.61e-14 | 25 |
small intestine | 2.12e-12 | 4 |
gut epithelium | 2.80e-09 | 54 |
subdivision of digestive tract | 7.44e-09 | 118 |
epithelium of mucosa | 3.51e-08 | 8 |
simple columnar epithelium | 2.29e-07 | 9 |
colon | 2.44e-07 | 9 |
liver | 2.59e-07 | 19 |
digestive gland | 2.59e-07 | 19 |
liver bud | 2.59e-07 | 19 |
digestive system | 4.90e-07 | 145 |
digestive tract | 4.90e-07 | 145 |
primitive gut | 4.90e-07 | 145 |