FFCP PHASE1:Hg19::chr10:124214164..124214184,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=387715 | |EntrezGene=387715 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=32685 | |HGNC=32685 | ||
|TSSclassifier=strong | |||
|UniProt=P0C7Q2 | |UniProt=P0C7Q2 | ||
|association_with_transcript=0bp_to_ENST00000528446,NM_001099667,uc001lgi.2_5end | |association_with_transcript=0bp_to_ENST00000528446,NM_001099667,uc001lgi.2_5end | ||
|cluster_id=chr10:124214164..124214184,+ | |||
|coexpression_cluster_id=C34 | |coexpression_cluster_id=C34 | ||
|description=CAGE_peak_1_at_ARMS2_5end | |description=CAGE_peak_1_at_ARMS2_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0002541!1.89e-50!3;CL:0000242!1.57e-09!2;CL:0000767!9.64e-07!3 | |ontology_enrichment_celltype=CL:0002541!1.89e-50!3;CL:0000242!1.57e-09!2;CL:0000767!9.64e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0002541;2.19e-53;3!CL:0000349;2.17e-09;19 | |ontology_enrichment_celltype_v019=CL:0002541;2.19e-53;3!CL:0000349;2.17e-09;19 | ||
|ontology_enrichment_celltype_v019_2=CL:0002541,2.19e-53,3;CL:0000349,2.17e-09,19 | |||
|ontology_enrichment_development_v019=UBERON:0003124;6.62e-41;1!UBERON:0004872;5.08e-07;7 | |ontology_enrichment_development_v019=UBERON:0003124;6.62e-41;1!UBERON:0004872;5.08e-07;7 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000476!1.89e-50!3;UBERON:0000920!1.89e-50!3;UBERON:0003124!1.73e-38!7;UBERON:0005631!7.55e-30!14;UBERON:0000158!7.55e-30!14;UBERON:0000478!1.75e-17!24;UBERON:0000473!3.70e-09!8;UBERON:0004923!2.23e-07!57;UBERON:0003135!6.74e-07!11 | |ontology_enrichment_uberon=UBERON:0000476!1.89e-50!3;UBERON:0000920!1.89e-50!3;UBERON:0003124!1.73e-38!7;UBERON:0005631!7.55e-30!14;UBERON:0000158!7.55e-30!14;UBERON:0000478!1.75e-17!24;UBERON:0000473!3.70e-09!8;UBERON:0004923!2.23e-07!57;UBERON:0003135!6.74e-07!11 | ||
|ontology_enrichment_uberon_v019=UBERON:0003124;2.19e-53;3!UBERON:0000920;2.19e-53;3!UBERON:0005631;6.93e-17;10!UBERON:0000158;6.93e-17;10!UBERON:0000478;1.02e-15;24!UBERON:0001987;2.53e-11;4 | |ontology_enrichment_uberon_v019=UBERON:0003124;2.19e-53;3!UBERON:0000920;2.19e-53;3!UBERON:0005631;6.93e-17;10!UBERON:0000158;6.93e-17;10!UBERON:0000478;1.02e-15;24!UBERON:0001987;2.53e-11;4 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000920,2.19e-53,3;UBERON:0003124,1.93e-51,7;UBERON:0005631,2.90e-26,14;UBERON:0000158,2.90e-26,14;UBERON:0000478,1.02e-15,24;UBERON:0001987,2.53e-11,4;UBERON:0004340,2.53e-11,4 | |||
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|short_description=p1@ARMS2 | |short_description=p1@ARMS2 | ||
}} | }} |
Latest revision as of 20:21, 16 September 2015
Short description: | p1@ARMS2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ARMS2_5end |
Coexpression cluster: | C34_placenta_chorionic_choriocarcinoma_mesothelioma_Wilms_Smooth_bile |
Association with transcript: | 0bp_to_ENST00000528446, NM_001099667, uc001lgi.2_5end |
EntrezGene: | ARMS2 |
HGNC: | 32685 |
UniProt: | P0C7Q2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chorionic membrane mesenchymal stem cell | 2.19e-53 | 3 |
extraembryonic cell | 2.17e-09 | 19 |
Ontology term | p-value | n |
---|---|---|
egg chorion | 2.19e-53 | 3 |
chorion | 1.93e-51 | 7 |
extraembryonic membrane | 2.90e-26 | 14 |
membranous layer | 2.90e-26 | 14 |
extraembryonic structure | 1.02e-15 | 24 |
placenta | 2.53e-11 | 4 |
allantois | 2.53e-11 | 4 |