FFCP PHASE1:Hg19::chr7:45956856..45957005,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3486 | |EntrezGene=3486 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=5472 | |HGNC=5472 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000428530_5end | |association_with_transcript=0bp_to_ENST00000428530_5end | ||
|cluster_id=chr7:45956856..45957005,- | |||
|coexpression_cluster_id=C223 | |coexpression_cluster_id=C223 | ||
|description=CAGE_peak_3_at_IGFBP3_5end | |description=CAGE_peak_3_at_IGFBP3_5end | ||
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|ontology_enrichment_celltype=CL:0000055!3.43e-10!180;CL:0000359!2.01e-08!32;CL:0000057!9.59e-07!75 | |ontology_enrichment_celltype=CL:0000055!3.43e-10!180;CL:0000359!2.01e-08!32;CL:0000057!9.59e-07!75 | ||
|ontology_enrichment_celltype_v019=CL:0000359;9.76e-10;32!CL:0002620;2.63e-08;23!CL:0002334;3.42e-07;12 | |ontology_enrichment_celltype_v019=CL:0000359;9.76e-10;32!CL:0002620;2.63e-08;23!CL:0002334;3.42e-07;12 | ||
|ontology_enrichment_celltype_v019_2=CL:0000057,1.69e-10,76;CL:0000359,2.20e-10,32;CL:0002620,3.09e-08,23;CL:0002334,4.08e-07,12 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002100!2.87e-10!216;UBERON:0005256!7.58e-08!143;UBERON:0003104!9.08e-08!238;UBERON:0009142!9.08e-08!238;UBERON:0003914!3.64e-07!118;UBERON:0004872!4.56e-07!84;UBERON:0000475!4.56e-07!365;UBERON:0001134!6.65e-07!61;UBERON:0002036!6.65e-07!61;UBERON:0003082!6.65e-07!61 | |ontology_enrichment_uberon=UBERON:0002100!2.87e-10!216;UBERON:0005256!7.58e-08!143;UBERON:0003104!9.08e-08!238;UBERON:0009142!9.08e-08!238;UBERON:0003914!3.64e-07!118;UBERON:0004872!4.56e-07!84;UBERON:0000475!4.56e-07!365;UBERON:0001134!6.65e-07!61;UBERON:0002036!6.65e-07!61;UBERON:0003082!6.65e-07!61 | ||
|ontology_enrichment_uberon_v019=UBERON:0004573;1.17e-07;33!UBERON:0004571;1.17e-07;33!UBERON:0004457;1.30e-07;9!UBERON:0000042;1.30e-07;9!UBERON:0003688;6.50e-07;6!UBERON:0002358;6.50e-07;6!UBERON:0003684;6.50e-07;6!UBERON:0001178;6.50e-07;6 | |ontology_enrichment_uberon_v019=UBERON:0004573;1.17e-07;33!UBERON:0004571;1.17e-07;33!UBERON:0004457;1.30e-07;9!UBERON:0000042;1.30e-07;9!UBERON:0003688;6.50e-07;6!UBERON:0002358;6.50e-07;6!UBERON:0003684;6.50e-07;6!UBERON:0001178;6.50e-07;6 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0004573,7.52e-09,33;UBERON:0004571,7.52e-09,33;UBERON:0001637,1.03e-08,42;UBERON:0003509,1.03e-08,42;UBERON:0004572,1.03e-08,42;UBERON:0004872,1.45e-08,83;UBERON:0002199,9.05e-08,46;UBERON:0002416,9.05e-08,46;UBERON:0002100,1.78e-07,199;UBERON:0001134,2.08e-07,62;UBERON:0002036,2.08e-07,62;UBERON:0003082,2.08e-07,62;UBERON:0005631,4.18e-07,14;UBERON:0000158,4.18e-07,14;UBERON:0002097,4.66e-07,41;UBERON:0002329,5.31e-07,71;UBERON:0003059,5.31e-07,71;UBERON:0007282,5.31e-07,71;UBERON:0004290,5.31e-07,71;UBERON:0009618,5.31e-07,71;UBERON:0003688,6.41e-07,6;UBERON:0002358,6.41e-07,6;UBERON:0003684,6.41e-07,6;UBERON:0001178,6.41e-07,6;UBERON:0002385,6.62e-07,64;UBERON:0001015,6.62e-07,64;UBERON:0000383,6.62e-07,64;UBERON:0003077,8.89e-07,72;UBERON:0007285,8.89e-07,72 | |||
|phase1_expression=11.8090946525862,11.7755288140041,15.0821212382689,14.0102617694383,5.81049422755474,13.9574163856059,0,2.52687949370732,3.3954131665979,3.44027511102112,2.09340350391728,0.218441372130172,0.791300934685361,0.123766352960047,0.662794751455832,0,1.20538905604795,2.92124036154949,3.41552959153355,0,0.408001382488506,1.25381888591235,0.286235987131057,0,0.376627918784408,0,0.0821005894499457,0,0,0,1.39334510984468,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.294605907474837,0,0,0,0,0,0,0,0,0,0,0.113309342697566,0,0,0,0.318565414324097,0.651083453856419,0,0,0,0,0.236777252044017,0,0,0,0,0,1.34140171940727,2.9408389224012,249.393015145351,210.561922467074,145.281058517706,102.591887169592,114.845829391422,0.0945348171640679,2.21729397462564,1.58102614247627,1.0478326039817,0,0,0,0,0,0.715471872916026,0,0.371457501329565,0,0,0,0,0.419499436209906,0,0,0,0.35576626268671,0.33472061276467,0,0,0.24406205754817,0,0,0.0892997282840798,0,0,0,0,0,0,0,0.436094052142534,8.44852317882041,3.54565432660823,0.132409180813219,4.87622255272983,0.354668382198357,6.72813120170769,10.6748995729705,7.64669400093196,0.622422070799533,0,0,0.454072282934794,0,0,0,0,0.149448680551801,0.117434498643765,0,0.140450806702248,0,0,0.103325781175765,0,1.7308685049499,0,0,0,0,0,1.75591048352335,2.14541457059314,1.65261864797256,0.453728732640084,23.3206526395521,16.4439189390297,27.1272833484239,25.5077431671742,20.198295730734,18.5501188832853,35.3622027030021,9.62025093775217,13.738617727729,28.2725827153408,37.3722588487735,1.13152239773168,50.7663717298758,33.7519529062595,5.4259389539356,0,0,0,0.121973706129595,0.132529768321485,0.464775771478074,0.414644220061482,0,0,3.12899064659632,5.14592750554308,1.38134921352481,0,0.721879481669586,0.354920400119532,0.505754070234305,0.723033089650446,0.55146986366197,1.08939722046203,0.237270619111097,0.134831308160164,0,0,0,0,0.4115740113314,0,1.26755034821831,0.982827216677626,11.8157981336281,0,0,0.686271241194102,0,0,0,0,0,0,0,0,0.821860859650752,0.433099343283221,0.462985512576611,0,0,0,0,0,0,0,0,0,0.0895585227028483,0,0.383382679165211,0,0,0,0,0,0,0,0,0,0.102827492703324,0,0,0,5.23152082599936,0.22001485746285,0.904902010304444,0,0,1.32969058292435,1.04007436911366,0,0,0,0.142977993658148,2.17048642156577,0,0,0,0,3.01439377059586,4.35766729300147,2.0994328148232,0,0,0,2.15662369942424,14.9320516584348,0,11.7272858400739,4.9314317412092,8.41586527227509,0,0,0,0,0.254094624222463,0,0.773288812777695,0.167516265334349,1.27587750330633,0,0,0,0.858840442033979,1.50051156317903,0.271265023699736,9.98260135347874,8.3861624734666,3.6271555457805,6.09135357962109,0,4.5481500811197,5.17365356462525,0.664225598535437,4.24049087645917,0.347534457872331,0,0,0,0,0,7.27506171471023,0,5.44302527993425,15.3826840847642,5.21770709179412,11.507063871756,12.429497477803,28.6556059477354,6.11244900345709,4.45254199334973,0,7.10246901252508,2.05317890034523,0,2.32420756919918,0,1.60405176242628,0.0920809889358963,2.87036120411517,0.364182336013434,1.44236856455367,0.902399225814824,0.0770153371044148,0.784349769176855,0,0.105551628892876,0,0,0.431831832204279,4.62681758070868,0.270946437543853,0.501689773854853,0,2.49322802678617,0.447749509444357,0,0,0,0.328014645699706,0,5.46117361732928,0,0,0,0,3.21367859688319,1.45006077438183,0,0,0,0,0.145016693914229,0.0852266274161009,1.86967274858148,0,0,0,0.30347334256665,4.64845549297286,19.203553156669,0,1.84820148105653,2.12922412126809,0,20.3856641014312,52.3837085475688,0,0.949138274156178,0.38126038784765,0.255897791311334,0,5.40945521474092,4.70969184119538,0.179872457583315,0.274537029736055,0.117812402345686,2.22400729730648,15.8510321173008,1.68503382495592,0.975267478179181,4.6305563029944,14.7910205459458,0.682499557039929,0,6.78048699721457,8.82184549673799,29.8547538858549,90.3208823622751,0,0,3.24656603140326,2.16876448669825,0.281695602532241,0,0.0982490410131212,3.92338156629375,0,28.4995307651847,13.8303855043159,0,0,0,0,0,5.83691564816031,0.43050537267123,0,0.443430153536676,0,0,0,0,0,0,0,0,0,0.320472213382419,0,4.41072388765857,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.8071081061233,6.00683535014765,0,0,0,16.4733694469006,21.0844923391173,18.4296421259539,1.9882952955326,0.140669416410513,0.556543525114529,0,0,3.18796781201712,2.21027132424918,0,0,0,111.352172382927,0.988551862620595,2.32727527078292,0,2.86065876347107,0,0,0,0.278304294485554,0,0,0,7.97499532978273,0.227586896570999,0.254253650292766,6.14607972596635,0,0,0,0,0,0,0.110579259931225,0,0.438770794307945,0.21787692703798,1.11538995422883,4.07836370070124,0.227884111694002,0,0,0,16.9070614657917,3.38911095586891,39.9776082013976,0,0,0,0,0,0,0,0,0,4.73375143661528,0,0,0.995261931078505,1.85760885457012,2.4441205797345,0,0,0,0.067401132980677,4.01288823649394,0,0,0,0,0.394584402849391,0,0.30607276163049,2.02197054811161,0,0,0,0.330991955875499,0,0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| ||
|short_description=p3@IGFBP3 | |short_description=p3@IGFBP3 | ||
}} | }} |
Latest revision as of 19:53, 18 September 2015
Short description: | p3@IGFBP3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_IGFBP3_5end |
Coexpression cluster: | C223_Chondrocyte_basal_renal_Fibroblast_Smooth_spindle_Synoviocyte |
Association with transcript: | 0bp_to_ENST00000428530_5end |
EntrezGene: | IGFBP3 |
HGNC: | 5472 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 1.69e-10 | 76 |
vascular associated smooth muscle cell | 2.20e-10 | 32 |
skin fibroblast | 3.09e-08 | 23 |
preadipocyte | 4.08e-07 | 12 |
Ontology term | p-value | n |
---|---|---|
systemic artery | 7.52e-09 | 33 |
systemic arterial system | 7.52e-09 | 33 |
artery | 1.03e-08 | 42 |
arterial blood vessel | 1.03e-08 | 42 |
arterial system | 1.03e-08 | 42 |
splanchnic layer of lateral plate mesoderm | 1.45e-08 | 83 |
integument | 9.05e-08 | 46 |
integumental system | 9.05e-08 | 46 |
trunk | 1.78e-07 | 199 |
skeletal muscle tissue | 2.08e-07 | 62 |
striated muscle tissue | 2.08e-07 | 62 |
myotome | 2.08e-07 | 62 |
extraembryonic membrane | 4.18e-07 | 14 |
membranous layer | 4.18e-07 | 14 |
skin of body | 4.66e-07 | 41 |
somite | 5.31e-07 | 71 |
presomitic mesoderm | 5.31e-07 | 71 |
presumptive segmental plate | 5.31e-07 | 71 |
dermomyotome | 5.31e-07 | 71 |
trunk paraxial mesoderm | 5.31e-07 | 71 |
omentum | 6.41e-07 | 6 |
peritoneum | 6.41e-07 | 6 |
abdominal cavity | 6.41e-07 | 6 |
visceral peritoneum | 6.41e-07 | 6 |
muscle tissue | 6.62e-07 | 64 |
musculature | 6.62e-07 | 64 |
musculature of body | 6.62e-07 | 64 |
paraxial mesoderm | 8.89e-07 | 72 |
presumptive paraxial mesoderm | 8.89e-07 | 72 |