FFCP PHASE1:Hg19::chr5:159848854..159848878,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9232 | |EntrezGene=9232 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9690 | |HGNC=9690 | ||
|TSSclassifier=strong | |||
|UniProt=E5RJR4,O95997,Q6IAL9 | |UniProt=E5RJR4,O95997,Q6IAL9 | ||
|association_with_transcript=0bp_to_ENST00000517480,ENST00000523659,ENST00000524244,NM_004219,uc003lyj.2_5end | |association_with_transcript=0bp_to_ENST00000517480,ENST00000523659,ENST00000524244,NM_004219,uc003lyj.2_5end | ||
|cluster_id=chr5:159848854..159848878,+ | |||
|coexpression_cluster_id=C4408 | |coexpression_cluster_id=C4408 | ||
|description=CAGE_peak_1_at_PTTG1_5end | |description=CAGE_peak_1_at_PTTG1_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0000548!5.42e-26!679;CL:0000004!5.42e-26!679;CL:0000255!5.42e-26!679;CL:0000012!1.78e-25!682;CL:0000066!5.86e-24!254;CL:0000003!1.07e-15!722;CL:0002321!3.41e-15!248;CL:0000220!2.05e-14!246;CL:0000063!1.93e-11!578;CL:0000144!1.51e-10!625;CL:0000221!2.67e-09!71;CL:0000055!6.09e-09!180;CL:0000076!2.51e-08!62;CL:0000333!2.95e-08!41;CL:0000133!3.68e-08!59;CL:0002371!3.83e-07!591 | |ontology_enrichment_celltype=CL:0000548!5.42e-26!679;CL:0000004!5.42e-26!679;CL:0000255!5.42e-26!679;CL:0000012!1.78e-25!682;CL:0000066!5.86e-24!254;CL:0000003!1.07e-15!722;CL:0002321!3.41e-15!248;CL:0000220!2.05e-14!246;CL:0000063!1.93e-11!578;CL:0000144!1.51e-10!625;CL:0000221!2.67e-09!71;CL:0000055!6.09e-09!180;CL:0000076!2.51e-08!62;CL:0000333!2.95e-08!41;CL:0000133!3.68e-08!59;CL:0002371!3.83e-07!591 | ||
|ontology_enrichment_celltype_v019= | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2=CL:0000066,2.72e-24,253;CL:0002321,3.52e-15,250;CL:0000221,5.38e-09,72;CL:0000333,2.95e-08,41;CL:0000133,3.68e-08,59;CL:0000076,5.11e-08,63 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:162!7.13e-41!235;DOID:14566!9.97e-40!239;DOID:0050687!1.35e-19!143;DOID:0050686!7.10e-18!137;DOID:305!1.11e-15!106;DOID:2531!3.70e-14!51;DOID:0060083!3.70e-14!51;DOID:1240!2.23e-10!39;DOID:8692!1.54e-07!31 | |ontology_enrichment_disease=DOID:162!7.13e-41!235;DOID:14566!9.97e-40!239;DOID:0050687!1.35e-19!143;DOID:0050686!7.10e-18!137;DOID:305!1.11e-15!106;DOID:2531!3.70e-14!51;DOID:0060083!3.70e-14!51;DOID:1240!2.23e-10!39;DOID:8692!1.54e-07!31 | ||
|ontology_enrichment_disease_v019=DOID:2531;6.18e-09;51!DOID:0060083;6.18e-09;51!DOID:1240;2.05e-08;39!DOID:8692;2.14e-07;31 | |ontology_enrichment_disease_v019=DOID:2531;6.18e-09;51!DOID:0060083;6.18e-09;51!DOID:1240;2.05e-08;39!DOID:8692;2.14e-07;31 | ||
|ontology_enrichment_disease_v019_2=DOID:162,7.09e-41,235;DOID:14566,9.91e-40,239;DOID:0050687,1.35e-19,143;DOID:0050686,7.09e-18,137;DOID:305,1.11e-15,106;DOID:2531,3.69e-14,51;DOID:0060083,3.69e-14,51;DOID:1240,2.23e-10,39;DOID:8692,1.54e-07,31 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2= | |||
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| ||
|short_description=p1@PTTG1 | |short_description=p1@PTTG1 | ||
}} | }} |
Latest revision as of 16:21, 16 September 2015
Short description: | p1@PTTG1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_PTTG1_5end |
Coexpression cluster: | C4408_fibrous_Reticulocytes_carcinoid_testicular_iPS_alveolar_teratocarcinoma |
Association with transcript: | 0bp_to_ENST00000517480, ENST00000523659, ENST00000524244, NM_004219, uc003lyj.2_5end |
EntrezGene: | PTTG1 |
HGNC: | 9690 |
UniProt: | E5RJR4O95997Q6IAL9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 2.72e-24 | 253 |
embryonic cell | 3.52e-15 | 250 |
ectodermal cell | 5.38e-09 | 72 |
migratory neural crest cell | 2.95e-08 | 41 |
neurectodermal cell | 3.68e-08 | 59 |
squamous epithelial cell | 5.11e-08 | 63 |
Ontology term | p-value | n |
---|---|---|
cancer | 7.09e-41 | 235 |
disease of cellular proliferation | 9.91e-40 | 239 |
cell type cancer | 1.35e-19 | 143 |
organ system cancer | 7.09e-18 | 137 |
carcinoma | 1.11e-15 | 106 |
hematologic cancer | 3.69e-14 | 51 |
immune system cancer | 3.69e-14 | 51 |
leukemia | 2.23e-10 | 39 |
myeloid leukemia | 1.54e-07 | 31 |