FFCP PHASE1:Hg19::chr3:49893942..49893953,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10293 | |EntrezGene=10293 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30764 | |HGNC=30764 | ||
|TSSclassifier=strong | |||
|UniProt=E7EVC4 | |UniProt=E7EVC4 | ||
|association_with_transcript=28bp_to_ENST00000473195_5end | |association_with_transcript=28bp_to_ENST00000473195_5end | ||
|cluster_id=chr3:49893942..49893953,- | |||
|description=CAGE_peak_2_at_TRAIP_5end | |description=CAGE_peak_2_at_TRAIP_5end | ||
|id=chr3:49893942..49893953,- | |id=chr3:49893942..49893953,- | ||
|ontology_enrichment_celltype=CL:0000066!9.72e-07!254 | |ontology_enrichment_celltype=CL:0000066!9.72e-07!254 | ||
|ontology_enrichment_celltype_v019=CL:0000817;5.09e-09;1!CL:0000319;5.09e-09;1!CL:0002322;4.69e-07;5 | |ontology_enrichment_celltype_v019=CL:0000817;5.09e-09;1!CL:0000319;5.09e-09;1!CL:0002322;4.69e-07;5 | ||
|ontology_enrichment_celltype_v019_2=CL:0000319,5.75e-09,1;CL:0002322,4.16e-07,5 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:162!3.54e-33!235;DOID:14566!5.11e-32!239;DOID:0050687!8.11e-17!143;DOID:305!2.80e-12!106;DOID:2531!4.29e-12!51;DOID:0060083!4.29e-12!51;DOID:0050686!3.19e-11!137;DOID:1240!4.09e-09!39 | |ontology_enrichment_disease=DOID:162!3.54e-33!235;DOID:14566!5.11e-32!239;DOID:0050687!8.11e-17!143;DOID:305!2.80e-12!106;DOID:2531!4.29e-12!51;DOID:0060083!4.29e-12!51;DOID:0050686!3.19e-11!137;DOID:1240!4.09e-09!39 | ||
|ontology_enrichment_disease_v019=DOID:0060060;5.09e-09;1!DOID:0060061;5.09e-09;1!DOID:3030;5.09e-09;1!DOID:8691;5.09e-09;1!DOID:0060058;1.89e-07;10 | |ontology_enrichment_disease_v019=DOID:0060060;5.09e-09;1!DOID:0060061;5.09e-09;1!DOID:3030;5.09e-09;1!DOID:8691;5.09e-09;1!DOID:0060058;1.89e-07;10 | ||
|ontology_enrichment_disease_v019_2=DOID:3030,5.75e-09,1;DOID:0060060,6.72e-09,1;DOID:0060061,6.72e-09,1;DOID:8691,6.72e-09,1;DOID:2531,1.98e-08,51;DOID:0060083,1.98e-08,51;DOID:0060058,2.10e-07,10 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0002331;1.08e-07;10 | |ontology_enrichment_uberon_v019=UBERON:0002331;1.08e-07;10 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002331,9.31e-08,10;UBERON:0000358,9.31e-08,10;UBERON:0000307,9.31e-08,10;UBERON:0000091,9.31e-08,10;UBERON:0000087,9.31e-08,10;UBERON:0007010,9.31e-08,10;UBERON:0007806,9.31e-08,10;UBERON:0008780,9.31e-08,10;UBERON:0005728,9.31e-08,10 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0.263766978228454,0,0,0,0,0,0,0.861847406537515,0.204000691244253,0,0.572471974262113,0.273748850145768,0.125542639594803,0.840547463227464,0.492603536699674,0.787107813136792,0,0,0.154816123316076,0.919421224478927,0.30120591877825,0.369754010166788,1.93668001450754,0.853015394924529,0,0,0,0.217010870715852,0,0,0,0,0,0.242584061187816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.182664153764634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196709770113833,0,0,0,0,0,0,0.445641827540694,0,0,0.270803863765016,0,0.130059347559878,0.164437904603676,0,0.579606171470105,0,0,0,0.566546713487831,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144824403882799,0,0,0.255725123687061,0.722878304769133,0.50133791063589,0,0,0,0.189069634328136,0.221729397462564,0.175669571386252,0,0,0.741568885568859,0,0,0,0,0,0,0.198762407366705,0,0.347140501607594,0,0.419499436209906,0.550236083880135,0.208994966536811,0,0,0,0,0,0.24406205754817,0.367663080345869,0,0.0892997282840798,0.22452937262617,0,0,0,0.366403487860815,0,0,0,0,0,0,0,0,0,0,0.24666754841716,0,0.134710672069688,0.490385709340376,0.151357427644931,0,0.468642863667593,0,0,0,0,0.161872944368132,0.280901613404497,0,0.122834317311768,0.103325781175765,0,0,0,0,0.168336113954066,0,0.554128230968366,0.438977620880838,0,0.150238058906597,0.340296549480063,0.538168907066586,0,0,0.900273288253207,0.412210116953756,0.515281080091258,0,0.506328996723799,0.194874010322397,0.504867548488229,0,0,0.710019185033229,0.403008392910561,0,0,0,0,0.487894824518382,0.397589304964456,1.2781333715647,0.310983165046111,1.51392510525377,0.72995471815166,0,0,1.38134921352481,0,0,0.709840800239063,0.505754070234305,0.482022059766964,0.330881918197182,0.217879444092406,0.474541238222193,0.539325232640658,0.784885860501384,1.15424147083917,0,0,0,0,0,0,0,0.441463099414651,0.491953754172454,0.171567810298526,0,0,0,0.370353780634118,0.325808305310325,0,0,0.115930404975077,0,0.288732895522148,0,0.190254152234598,0.790204397959275,0,0,0,0.445893486866185,0,0,0,0.626909658919938,0.581267877027924,0,0,0.088048434013226,0,0,0,0.571481048629521,0,0,0,0,0.600686115687835,0,0.336393253036082,0,0.66004457238855,0.129271715757778,0,0,0,0,0.514414748524284,1.41849132023278,0.799266537048298,0,0,0,0,0.355391948742546,0.791951872933429,0,0,0,0,0,0,0,0,0,0.144781306667579,0.410952645100767,0.179060963239896,0.336255431980582,0,0,0,0,1.30139853857622,0,0,0.637938751653163,0,0,0,0,0,0,0,0.178428988797162,0,0,0,0,0,0.664225598535437,0,0,0,0,0,0,0,0.303127571446259,0,0,0,0.153461973288062,0,0,0,0,0,0.462629081407967,0.355123450626254,0.492762936082855,0,0.464841513839837,0.241718899183244,0,0,0.918515585316854,0.546273504020151,0,0.451199612907412,0.15403067420883,0,0,0,0,0.510281115829547,0.431831832204279,0,0,0,0.254876273045038,0,0.895499018888713,0,0,0.769350375349168,0.656029291399411,0,0,0.457847324091717,0.41254749960294,0,0,0,0,0,0,0.551346289938122,0,0,0.340906509664404,0.178064071293475,0,0.192190067365106,0.510450849978337,0,0,0,0,0,0,0,0,0,0,0,0.190630193923825,0.255897791311334,0,0,0,0.179872457583315,0.274537029736055,0.117812402345686,0.202182481573316,0,0,0.48763373908959,0,0,0.136499911407986,0,0,0.551365343546124,0,0,0,0.655894752046633,0,0.6196469961995,0.563391205064483,0.286822704408103,0,0,0,0,0,0.379473173765715,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.640944426764839,0,0,0.557409525377156,1.00988449083511,0.284567373393656,0.797131363644112,1.1974762285969,0.766021480529467,0,0.973865820823666,0,0.684704037099577,0.94007937463814,0,0.50787533340481,0.1605880751037,0.201799707191048,0,1.03051603426729,0.614481528616916,0.223676107892416,0.500547425135725,0.586164286206121,1.11362469558097,0,0.270455678475983,0,0,0.561421621224659,0,0.121360521749513,1.00299045849731,0,0,0.296964680832639,0,0,0,0,0.659215496907038,0.63337622438398,0,0,0,0.20453736500431,0.492339221844278,0,0.179736702294654,0,0,0,0,0,0,0,0,0,0.0874599999961957,0,0.227586896570999,0.254253650292766,0.236387681767936,0.344743373241465,0.291604613383254,1.73624994933292,0,0.120596438625408,0,0,0,0,0.32681539055697,0.557694977114413,0,0.227884111694002,0.23056390438806,0.448788222048861,0.217294743844016,0,0.183195186803725,0,2.04386596391473,0.31396051279005,0.166211681900156,0.451191321234361,0.392125068635479,0.335643173951685,0.189753732724185,0.158936578980379,0,0.326465616318295,0.141353071433941,0.216388639742091,0,0.0884575645033392,0,2.6686901581256,2.34771483998355,1.56632924258183,0,0,0,0.547364367646998,0.19566461893209,0,0,0,0,0,6.76455387365216,0.518440956986236,0,0,0,0,0.284609546029793,0,0.347119476670262,0.195984794828755,0.435296032902013,0.17472666824203,0.171986032471617,0.387025325156341,0.438535902517113,0.410577285266046,0.0969890164884194,0.176512253383001,0,0.548167698587004,0.397429223405979,0.0633107959558787,0.782205530939212,0,0,0.599428828746391,0,0.458146384663663,0.514784993585894,0,0.124252535565433,0.707082103850386,0.407712618220842,0.836822770498666,0.101998217636322,0.28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| ||
|short_description=p2@TRAIP | |short_description=p2@TRAIP | ||
}} | }} |
Latest revision as of 17:39, 18 September 2015
Short description: | p2@TRAIP |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_TRAIP_5end |
Coexpression cluster: | NA |
Association with transcript: | 28bp_to_ENST00000473195_5end |
EntrezGene: | TRAIP |
HGNC: | 30764 |
UniProt: | E7EVC4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mucus secreting cell | 5.75e-09 | 1 |
embryonic stem cell | 4.16e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
umbilical cord | 9.31e-08 | 10 |
blastocyst | 9.31e-08 | 10 |
blastula | 9.31e-08 | 10 |
bilaminar disc | 9.31e-08 | 10 |
inner cell mass | 9.31e-08 | 10 |
cleaving embryo | 9.31e-08 | 10 |
connecting stalk | 9.31e-08 | 10 |
inner cell mass derived epiblast | 9.31e-08 | 10 |
extraembryonic mesoderm | 9.31e-08 | 10 |
Ontology term | p-value | n |
---|---|---|
mucinous adenocarcinoma | 5.75e-09 | 1 |
non-Hodgkin lymphoma | 6.72e-09 | 1 |
cutaneous T cell lymphoma | 6.72e-09 | 1 |
mycosis fungoides | 6.72e-09 | 1 |
hematologic cancer | 1.98e-08 | 51 |
immune system cancer | 1.98e-08 | 51 |
lymphoma | 2.10e-07 | 10 |