FFCP PHASE1:Hg19::chr16:84228997..84229004,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr16:84228997..84229004,+ | |||
|coexpression_cluster_id=C41 | |coexpression_cluster_id=C41 | ||
|description=CAGE_peak_at_chr16:84228997..84229004,+ | |description=CAGE_peak_at_chr16:84228997..84229004,+ | ||
|id=chr16:84228997..84229004,+ | |id=chr16:84228997..84229004,+ | ||
|ontology_enrichment_celltype=CL:0002586!1.60e-14!3;CL:0000149!3.10e-11!4 | |ontology_enrichment_celltype=CL:0002586!1.60e-14!3;CL:0000149!3.10e-11!4 | ||
|ontology_enrichment_celltype_v019=CL:0002586;3.66e-23;3!CL:0000149;9.45e-18;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0002586,4.09e-23,3;CL:0000149,1.03e-17,4 | |||
|ontology_enrichment_development_v019=UBERON:0003056;2.62e-23;3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000966!1.23e-32!5;UBERON:0005388!1.23e-32!5;UBERON:0001802!1.23e-32!5;UBERON:0000473!1.21e-20!8;UBERON:0000970!1.12e-18!20;UBERON:0002104!7.83e-18!21;UBERON:0000020!2.31e-16!23;UBERON:0001032!1.02e-15!24;UBERON:0004456!1.02e-15!24;UBERON:0003135!2.51e-15!11;UBERON:0001781!1.60e-14!3;UBERON:0001782!1.60e-14!3;UBERON:0005424!1.60e-14!3;UBERON:0000019!2.08e-09!19;UBERON:0000047!2.08e-09!19;UBERON:0004088!2.08e-09!19;UBERON:0003072!2.08e-09!19;UBERON:0003071!2.08e-09!19;UBERON:0004128!2.08e-09!19;UBERON:0001456!1.32e-08!21;UBERON:0000991!1.59e-08!21;UBERON:0009196!1.59e-08!21;UBERON:0009117!1.59e-08!21;UBERON:0005564!1.59e-08!21;UBERON:0004176!3.51e-08!22;UBERON:0003101!3.51e-08!22;UBERON:0000079!3.51e-08!22 | |ontology_enrichment_uberon=UBERON:0000966!1.23e-32!5;UBERON:0005388!1.23e-32!5;UBERON:0001802!1.23e-32!5;UBERON:0000473!1.21e-20!8;UBERON:0000970!1.12e-18!20;UBERON:0002104!7.83e-18!21;UBERON:0000020!2.31e-16!23;UBERON:0001032!1.02e-15!24;UBERON:0004456!1.02e-15!24;UBERON:0003135!2.51e-15!11;UBERON:0001781!1.60e-14!3;UBERON:0001782!1.60e-14!3;UBERON:0005424!1.60e-14!3;UBERON:0000019!2.08e-09!19;UBERON:0000047!2.08e-09!19;UBERON:0004088!2.08e-09!19;UBERON:0003072!2.08e-09!19;UBERON:0003071!2.08e-09!19;UBERON:0004128!2.08e-09!19;UBERON:0001456!1.32e-08!21;UBERON:0000991!1.59e-08!21;UBERON:0009196!1.59e-08!21;UBERON:0009117!1.59e-08!21;UBERON:0005564!1.59e-08!21;UBERON:0004176!3.51e-08!22;UBERON:0003101!3.51e-08!22;UBERON:0000079!3.51e-08!22 | ||
|ontology_enrichment_uberon_v019=UBERON:0000966;2.51e-53;5!UBERON:0005388;2.51e-53;5!UBERON:0001802;2.51e-53;5!UBERON:0000970;1.56e-30;20!UBERON:0002104;3.84e-29;21!UBERON:0000020;1.01e-26;23!UBERON:0001032;1.16e-25;24!UBERON:0004456;1.16e-25;24!UBERON:0001781;3.66e-23;3!UBERON:0001782;3.66e-23;3!UBERON:0000019;5.09e-15;19!UBERON:0000047;5.09e-15;19!UBERON:0004088;5.09e-15;19!UBERON:0010230;5.09e-15;19!UBERON:0001456;1.05e-13;21!UBERON:0007625;2.55e-07;11!UBERON:0000033;4.41e-07;50 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000966,1.22e-44,6;UBERON:0005388,1.22e-44,6;UBERON:0001802,1.22e-44,6;UBERON:0000970,3.84e-29,21;UBERON:0002104,3.84e-29,21;UBERON:0000020,1.16e-25,24;UBERON:0001032,1.16e-25,24;UBERON:0004456,1.16e-25,24;UBERON:0001782,4.09e-23,3;UBERON:0005424,4.09e-23,3;UBERON:0001781,1.03e-17,4;UBERON:0000019,2.58e-14,20;UBERON:0000047,2.58e-14,20;UBERON:0010312,2.58e-14,20;UBERON:0004088,2.58e-14,20;UBERON:0010230,2.58e-14,20;UBERON:0003072,2.58e-14,20;UBERON:0004128,2.58e-14,20;UBERON:0003071,2.58e-14,20;UBERON:0001456,4.01e-13,22;UBERON:0005085,1.20e-09,31;UBERON:0007625,2.63e-07,11 | |||
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|short_description=p@chr16:84228997..84229004,+ | |short_description=p@chr16:84228997..84229004,+ | ||
}} | }} |
Latest revision as of 12:52, 25 July 2015
Short description: | p@chr16:84228997..84229004, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr16:84228997..84229004, + |
Coexpression cluster: | C41_retina_eye_medulla_Retinal_medulloblastoma_kidney_pineal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
retinal pigment epithelial cell | 4.09e-23 | 3 |
visual pigment cell | 1.03e-17 | 4 |
Ontology term | p-value | n |
---|---|---|
retina | 1.22e-44 | 6 |
photoreceptor array | 1.22e-44 | 6 |
posterior segment of eyeball | 1.22e-44 | 6 |
eye | 3.84e-29 | 21 |
visual system | 3.84e-29 | 21 |
sense organ | 1.16e-25 | 24 |
sensory system | 1.16e-25 | 24 |
entire sense organ system | 1.16e-25 | 24 |
pigmented layer of retina | 4.09e-23 | 3 |
presumptive retinal pigmented epithelium | 4.09e-23 | 3 |
layer of retina | 1.03e-17 | 4 |
camera-type eye | 2.58e-14 | 20 |
simple eye | 2.58e-14 | 20 |
immature eye | 2.58e-14 | 20 |
ocular region | 2.58e-14 | 20 |
eyeball of camera-type eye | 2.58e-14 | 20 |
optic cup | 2.58e-14 | 20 |
optic vesicle | 2.58e-14 | 20 |
eye primordium | 2.58e-14 | 20 |
face | 4.01e-13 | 22 |
ectodermal placode | 1.20e-09 | 31 |
pigment epithelium of eye | 2.63e-07 | 11 |