FFCP PHASE1:Hg19::chr7:75924283..75924306,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr7:75924283..75924306,+ | |||
|coexpression_cluster_id=C411 | |coexpression_cluster_id=C411 | ||
|description=CAGE_peak_at_chr7:75924283..75924306,+ | |description=CAGE_peak_at_chr7:75924283..75924306,+ | ||
|id=chr7:75924283..75924306,+ | |id=chr7:75924283..75924306,+ | ||
|ontology_enrichment_celltype=CL:0000860!4.92e-12!45;CL:0002057!4.39e-11!42;CL:0000839!8.59e-08!70;CL:0000557!1.37e-07!71 | |ontology_enrichment_celltype=CL:0000860!4.92e-12!45;CL:0002057!4.39e-11!42;CL:0000839!8.59e-08!70;CL:0000557!1.37e-07!71 | ||
|ontology_enrichment_celltype_v019=CL:0000097;5.28e-10;5!CL:0000860;2.73e-08;33!CL:0002057;2.73e-08;33 | |||
|ontology_enrichment_celltype_v019_2=CL:0000097,7.16e-10,5;CL:0002028,7.16e-10,5;CL:0000839,5.26e-07,66;CL:0000557,7.14e-07,67 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!7.85e-25!115;UBERON:0001049!1.27e-17!57;UBERON:0005068!1.27e-17!57;UBERON:0006241!1.27e-17!57;UBERON:0007135!1.27e-17!57;UBERON:0002346!3.46e-15!90;UBERON:0003075!3.39e-14!86;UBERON:0007284!3.39e-14!86;UBERON:0002616!5.59e-14!59;UBERON:0002298!3.39e-12!8;UBERON:0003080!4.53e-12!42;UBERON:0000955!2.60e-11!69;UBERON:0006238!2.60e-11!69;UBERON:0002780!4.80e-11!41;UBERON:0001890!4.80e-11!41;UBERON:0006240!4.80e-11!41;UBERON:0001017!6.13e-11!82;UBERON:0005743!9.80e-11!86;UBERON:0002020!1.71e-10!34;UBERON:0003528!1.71e-10!34;UBERON:0002420!2.63e-10!9;UBERON:0007245!2.63e-10!9;UBERON:0010009!2.63e-10!9;UBERON:0010011!2.63e-10!9;UBERON:0000454!2.63e-10!9;UBERON:0002308!3.16e-10!9;UBERON:0000125!3.16e-10!9;UBERON:0001893!4.17e-10!34;UBERON:0000062!1.01e-09!511;UBERON:0000073!1.08e-09!94;UBERON:0001016!1.08e-09!94;UBERON:0002791!1.80e-09!33;UBERON:0001869!2.32e-08!32;UBERON:0003056!4.76e-08!61;UBERON:0009663!1.30e-07!7;UBERON:0000924!1.33e-07!173;UBERON:0006601!1.33e-07!173;UBERON:0003076!5.58e-07!15;UBERON:0003057!5.58e-07!15;UBERON:0004121!6.10e-07!169 | |ontology_enrichment_uberon=UBERON:0007023!7.85e-25!115;UBERON:0001049!1.27e-17!57;UBERON:0005068!1.27e-17!57;UBERON:0006241!1.27e-17!57;UBERON:0007135!1.27e-17!57;UBERON:0002346!3.46e-15!90;UBERON:0003075!3.39e-14!86;UBERON:0007284!3.39e-14!86;UBERON:0002616!5.59e-14!59;UBERON:0002298!3.39e-12!8;UBERON:0003080!4.53e-12!42;UBERON:0000955!2.60e-11!69;UBERON:0006238!2.60e-11!69;UBERON:0002780!4.80e-11!41;UBERON:0001890!4.80e-11!41;UBERON:0006240!4.80e-11!41;UBERON:0001017!6.13e-11!82;UBERON:0005743!9.80e-11!86;UBERON:0002020!1.71e-10!34;UBERON:0003528!1.71e-10!34;UBERON:0002420!2.63e-10!9;UBERON:0007245!2.63e-10!9;UBERON:0010009!2.63e-10!9;UBERON:0010011!2.63e-10!9;UBERON:0000454!2.63e-10!9;UBERON:0002308!3.16e-10!9;UBERON:0000125!3.16e-10!9;UBERON:0001893!4.17e-10!34;UBERON:0000062!1.01e-09!511;UBERON:0000073!1.08e-09!94;UBERON:0001016!1.08e-09!94;UBERON:0002791!1.80e-09!33;UBERON:0001869!2.32e-08!32;UBERON:0003056!4.76e-08!61;UBERON:0009663!1.30e-07!7;UBERON:0000924!1.33e-07!173;UBERON:0006601!1.33e-07!173;UBERON:0003076!5.58e-07!15;UBERON:0003057!5.58e-07!15;UBERON:0004121!6.10e-07!169 | ||
|ontology_enrichment_uberon_v019=UBERON:0002133;8.58e-12;2!UBERON:0002420;6.73e-09;9!UBERON:0000125;6.73e-09;9!UBERON:0007245;6.73e-09;9!UBERON:0002308;6.73e-09;9!UBERON:0010009;6.73e-09;9!UBERON:0010011;6.73e-09;9!UBERON:0000454;6.73e-09;9!UBERON:0002298;3.19e-08;6!UBERON:0003978;3.91e-08;3!UBERON:0000946;3.91e-08;3!UBERON:0001896;6.56e-08;3!UBERON:0005290;6.56e-08;3!UBERON:0000996;7.48e-07;1!UBERON:0009663;7.78e-07;7!UBERON:0002134;8.79e-07;1!UBERON:0005208;8.79e-07;1!UBERON:0004145;8.79e-07;1!UBERON:0005946;8.79e-07;1!UBERON:0005965;8.79e-07;1!UBERON:0002078;8.79e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002133,8.17e-12,2;UBERON:0000125,5.33e-09,9;UBERON:0002308,5.33e-09,9;UBERON:0002420,6.06e-09,9;UBERON:0007245,6.06e-09,9;UBERON:0010009,6.06e-09,9;UBERON:0010011,6.06e-09,9;UBERON:0000454,6.06e-09,9;UBERON:0002298,2.89e-08,6;UBERON:0003978,3.78e-08,3;UBERON:0009751,3.78e-08,3;UBERON:0000946,3.78e-08,3;UBERON:0002523,3.78e-08,3;UBERON:0005983,3.78e-08,3;UBERON:0002165,3.78e-08,3;UBERON:0002062,3.78e-08,3;UBERON:0007280,3.78e-08,3;UBERON:0007023,6.42e-08,114;UBERON:0001896,6.57e-08,3;UBERON:0005290,6.57e-08,3;UBERON:0010096,6.57e-08,3;UBERON:0002346,3.80e-07,86;UBERON:0009663,6.74e-07,7;UBERON:0000996,7.49e-07,1;UBERON:0002134,8.81e-07,1;UBERON:0005208,8.81e-07,1;UBERON:0005946,8.81e-07,1;UBERON:0005965,8.81e-07,1;UBERON:0002078,8.81e-07,1 | |||
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| ||
|short_description=p@chr7:75924283..75924306,+ | |short_description=p@chr7:75924283..75924306,+ | ||
}} | }} |
Latest revision as of 11:41, 31 July 2015
Short description: | p@chr7:75924283..75924306, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr7:75924283..75924306, + |
Coexpression cluster: | C411_vagina_Mast_breast_heart_CD14_aorta_liver |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mast cell | 7.16e-10 | 5 |
basophil mast progenitor cell | 7.16e-10 | 5 |
myeloid lineage restricted progenitor cell | 5.26e-07 | 66 |
granulocyte monocyte progenitor cell | 7.14e-07 | 67 |
Ontology term | p-value | n |
---|---|---|
atrioventricular valve | 8.17e-12 | 2 |
neural nucleus | 5.33e-09 | 9 |
nucleus of brain | 5.33e-09 | 9 |
basal ganglion | 6.06e-09 | 9 |
nuclear complex of neuraxis | 6.06e-09 | 9 |
aggregate regional part of brain | 6.06e-09 | 9 |
collection of basal ganglia | 6.06e-09 | 9 |
cerebral subcortex | 6.06e-09 | 9 |
brainstem | 2.89e-08 | 6 |
valve | 3.78e-08 | 3 |
cardiac mesenchyme | 3.78e-08 | 3 |
cardial valve | 3.78e-08 | 3 |
tunica intima | 3.78e-08 | 3 |
heart layer | 3.78e-08 | 3 |
endocardium | 3.78e-08 | 3 |
endocardial cushion | 3.78e-08 | 3 |
presumptive endocardium | 3.78e-08 | 3 |
adult organism | 6.42e-08 | 114 |
medulla oblongata | 6.57e-08 | 3 |
myelencephalon | 6.57e-08 | 3 |
future myelencephalon | 6.57e-08 | 3 |
neurectoderm | 3.80e-07 | 86 |
telencephalic nucleus | 6.74e-07 | 7 |
vagina | 7.49e-07 | 1 |
tricuspid valve | 8.81e-07 | 1 |
right atrium valve | 8.81e-07 | 1 |
outflow tract of atrium | 8.81e-07 | 1 |
outflow part of right atrium | 8.81e-07 | 1 |
right cardiac atrium | 8.81e-07 | 1 |