FFCP PHASE1:Hg19::chr1:207095275..207095278,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr1:207095275..207095278,-
|short_description=p4@FAIM3
|description=CAGE_peak_4_at_FAIM3_5end
|association_with_transcript=7bp_to_ENST00000463473,ENST000005333...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=9214 | |EntrezGene=9214 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14315 | |HGNC=14315 | ||
|TSSclassifier=strong | |||
|UniProt=E9PQG1 | |UniProt=E9PQG1 | ||
|association_with_transcript=7bp_to_ENST00000463473,ENST00000533312_5end | |||
|cluster_id=chr1:207095275..207095278,- | |||
|coexpression_cluster_id=C47 | |||
|description=CAGE_peak_4_at_FAIM3_5end | |||
|id=chr1:207095275..207095278,- | |||
|ontology_enrichment_celltype=CL:0000542!2.68e-40!53;CL:0000051!2.68e-40!53;CL:0000838!3.56e-39!52;CL:0000738!3.46e-34!140;CL:0002087!8.92e-34!119;CL:0002031!1.97e-26!124;CL:0000037!3.26e-26!172;CL:0000566!3.26e-26!172;CL:0002032!4.35e-24!165;CL:0000837!4.35e-24!165;CL:0000988!1.78e-23!182;CL:0000791!6.73e-23!18;CL:0000789!6.73e-23!18;CL:0002420!6.73e-23!18;CL:0002419!6.73e-23!18;CL:0000790!6.73e-23!18;CL:0000945!7.87e-19!24;CL:0000826!7.87e-19!24;CL:0000084!3.60e-18!25;CL:0000827!3.60e-18!25;CL:0000236!2.27e-15!14;CL:0000625!8.35e-15!11;CL:0000624!6.93e-09!6 | |||
|ontology_enrichment_celltype_v019=CL:0000791;2.88e-30;18!CL:0000789;2.88e-30;18!CL:0002419;2.88e-30;18!CL:0000542;1.51e-28;53!CL:0000945;8.57e-27;24!CL:0000236;2.03e-23;13!CL:0000084;1.50e-20;25!CL:0000625;4.33e-20;11!CL:0000624;6.61e-14;6!CL:0002087;1.16e-10;104!CL:0000898;3.21e-08;3!CL:0000226;1.68e-07;3!CL:0000842;1.68e-07;3!CL:0000623;7.33e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000542,2.81e-53,53;CL:0000051,2.81e-53,53;CL:0000838,1.80e-51,52;CL:0002087,4.01e-31,115;CL:0000791,2.50e-30,18;CL:0000789,2.50e-30,18;CL:0002420,2.50e-30,18;CL:0002419,2.50e-30,18;CL:0000790,2.50e-30,18;CL:0000738,5.15e-27,136;CL:0000945,8.10e-27,24;CL:0000826,8.10e-27,24;CL:0000236,1.42e-25,14;CL:0002031,2.11e-23,120;CL:0000084,1.36e-20,25;CL:0000827,1.36e-20,25;CL:0000625,3.87e-20,11;CL:0000037,1.94e-19,168;CL:0000988,8.21e-18,177;CL:0002032,1.71e-17,161;CL:0000837,1.71e-17,161;CL:0000624,6.39e-14,6;CL:0000898,3.17e-08,3;CL:0000226,1.44e-07,3;CL:0000842,1.44e-07,3;CL:0000623,8.27e-07,3;CL:0000825,8.27e-07,3 | |||
|ontology_enrichment_development_v019=CL:0000790;2.88e-30;18!CL:0000051;1.51e-28;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000178!3.46e-12!15;UBERON:0000179!3.46e-12!15;UBERON:0000463!3.46e-12!15;UBERON:0002390!3.86e-10!102;UBERON:0003061!3.86e-10!102;UBERON:0002193!9.46e-10!112;UBERON:0004177!3.38e-09!7;UBERON:0007023!6.49e-09!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;2.41e-20;15!UBERON:0000179;2.41e-20;15!UBERON:0000463;2.41e-20;15!UBERON:0002390;7.02e-14;32!UBERON:0002193;1.02e-09;42!UBERON:0004177;5.18e-08;5!UBERON:0005057;5.18e-08;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,2.21e-20,15;UBERON:0000179,2.21e-20,15;UBERON:0000463,2.21e-20,15;UBERON:0004177,2.10e-08,7;UBERON:0005057,2.10e-08,7;UBERON:0002193,9.89e-07,108 | |||
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| ||
|short_description=p4@FAIM3 | |||
}} | }} |
Latest revision as of 06:18, 20 September 2015
Short description: | p4@FAIM3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_FAIM3_5end |
Coexpression cluster: | C47_CD19_Burkitt_acute_xeroderma_tonsil_lymphoma_appendix |
Association with transcript: | 7bp_to_ENST00000463473, ENST00000533312_5end |
EntrezGene: | FAIM3 |
HGNC: | 14315 |
UniProt: | E9PQG1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte | 2.81e-53 | 53 |
common lymphoid progenitor | 2.81e-53 | 53 |
lymphoid lineage restricted progenitor cell | 1.80e-51 | 52 |
nongranular leukocyte | 4.01e-31 | 115 |
mature alpha-beta T cell | 2.50e-30 | 18 |
alpha-beta T cell | 2.50e-30 | 18 |
immature T cell | 2.50e-30 | 18 |
mature T cell | 2.50e-30 | 18 |
immature alpha-beta T cell | 2.50e-30 | 18 |
leukocyte | 5.15e-27 | 136 |
lymphocyte of B lineage | 8.10e-27 | 24 |
pro-B cell | 8.10e-27 | 24 |
B cell | 1.42e-25 | 14 |
hematopoietic lineage restricted progenitor cell | 2.11e-23 | 120 |
T cell | 1.36e-20 | 25 |
pro-T cell | 1.36e-20 | 25 |
CD8-positive, alpha-beta T cell | 3.87e-20 | 11 |
hematopoietic stem cell | 1.94e-19 | 168 |
hematopoietic cell | 8.21e-18 | 177 |
hematopoietic oligopotent progenitor cell | 1.71e-17 | 161 |
hematopoietic multipotent progenitor cell | 1.71e-17 | 161 |
CD4-positive, alpha-beta T cell | 6.39e-14 | 6 |
naive T cell | 3.17e-08 | 3 |
single nucleate cell | 1.44e-07 | 3 |
mononuclear cell | 1.44e-07 | 3 |
natural killer cell | 8.27e-07 | 3 |
pro-NK cell | 8.27e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
blood | 2.21e-20 | 15 |
haemolymphatic fluid | 2.21e-20 | 15 |
organism substance | 2.21e-20 | 15 |
hemopoietic organ | 2.10e-08 | 7 |
immune organ | 2.10e-08 | 7 |
hemolymphoid system | 9.89e-07 | 108 |