FFCP PHASE1:Hg19::chr1:21058562..21058595,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=400745 | |EntrezGene=400745 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=28819 | |HGNC=28819 | ||
|TSSclassifier=strong | |||
|UniProt=E5RGV2 | |UniProt=E5RGV2 | ||
|association_with_transcript=-478bp_to_ENST00000517430_5end | |association_with_transcript=-478bp_to_ENST00000517430_5end | ||
|cluster_id=chr1:21058562..21058595,- | |||
|description=CAGE_peak_2_at_SH2D5_5end | |description=CAGE_peak_2_at_SH2D5_5end | ||
|id=chr1:21058562..21058595,- | |id=chr1:21058562..21058595,- | ||
|ontology_enrichment_celltype=CL:0002159!9.88e-13!13;CL:0000066!1.62e-11!254;CL:0002368!4.09e-09!13;CL:0002076!1.19e-08!43;CL:0000240!2.48e-08!6;CL:0000311!2.48e-08!6;CL:0000079!2.48e-08!6;CL:0000237!2.48e-08!6;CL:0000036!2.48e-08!6;CL:0000357!2.48e-08!6;CL:0000114!2.48e-08!6;CL:0000362!5.41e-08!8;CL:0002321!7.98e-08!248;CL:0000220!1.28e-07!246;CL:0000312!4.50e-07!5;CL:0002077!5.99e-07!33 | |ontology_enrichment_celltype=CL:0002159!9.88e-13!13;CL:0000066!1.62e-11!254;CL:0002368!4.09e-09!13;CL:0002076!1.19e-08!43;CL:0000240!2.48e-08!6;CL:0000311!2.48e-08!6;CL:0000079!2.48e-08!6;CL:0000237!2.48e-08!6;CL:0000036!2.48e-08!6;CL:0000357!2.48e-08!6;CL:0000114!2.48e-08!6;CL:0000362!5.41e-08!8;CL:0002321!7.98e-08!248;CL:0000220!1.28e-07!246;CL:0000312!4.50e-07!5;CL:0002077!5.99e-07!33 | ||
|ontology_enrichment_celltype_v019=CL:0002368;1.11e-16;13!CL:0002328;1.83e-14;3!CL:0000240;2.84e-13;6!CL:0000311;2.84e-13;6!CL:0000079;2.84e-13;6!CL:0000237;2.84e-13;6!CL:0000362;5.71e-13;9!CL:0002202;7.72e-13;9!CL:0002632;7.72e-13;9!CL:0002159;1.74e-11;14!CL:0000317;7.31e-10;2!CL:1000448;7.31e-10;2!CL:0002308;7.31e-10;2!CL:0002140;7.31e-10;2!CL:0000312;1.92e-09;5!CL:0002076;5.87e-09;42!CL:0000307;2.51e-07;3!CL:0002621;3.38e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002368,9.87e-17,13;CL:0002328,1.16e-14,3;CL:0000240,3.28e-13,6;CL:0000311,3.28e-13,6;CL:0000079,3.28e-13,6;CL:0000237,3.28e-13,6;CL:0000036,3.28e-13,6;CL:0000357,3.28e-13,6;CL:0000114,3.28e-13,6;CL:0002202,7.56e-13,9;CL:0000362,7.56e-13,9;CL:0002632,7.56e-13,9;CL:0002159,2.52e-11,14;CL:0002076,3.08e-11,42;CL:0000317,1.21e-09,2;CL:1000448,1.21e-09,2;CL:0002308,1.21e-09,2;CL:0002140,1.21e-09,2;CL:0000312,1.93e-09,5;CL:0000223,1.50e-07,58;CL:0002621,2.52e-07,3;CL:0000068,3.33e-07,3;CL:0000069,3.33e-07,3;CL:0000307,3.33e-07,3;CL:0000377,3.33e-07,3 | |||
|ontology_enrichment_development_v019=CL:0000357;2.84e-13;6!CL:0000114;2.84e-13;6!UBERON:0010122;1.82e-10;2!CL:0000377;2.51e-07;3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001869!1.23e-14!32;UBERON:0001893!1.73e-14!34;UBERON:0002020!1.89e-14!34;UBERON:0003528!1.89e-14!34;UBERON:0000033!5.09e-14!123;UBERON:0004121!1.29e-13!169;UBERON:0002791!1.72e-13!33;UBERON:0002780!2.14e-13!41;UBERON:0001890!2.14e-13!41;UBERON:0006240!2.14e-13!41;UBERON:0003056!2.64e-13!61;UBERON:0003080!6.84e-13!42;UBERON:0000924!7.07e-13!173;UBERON:0006601!7.07e-13!173;UBERON:0000475!1.14e-12!365;UBERON:0000153!1.19e-12!129;UBERON:0007811!1.19e-12!129;UBERON:0000119!3.12e-11!312;UBERON:0000483!3.69e-11!309;UBERON:0000955!6.47e-11!69;UBERON:0006238!6.47e-11!69;UBERON:0003075!7.53e-11!86;UBERON:0007284!7.53e-11!86;UBERON:0000956!9.71e-11!25;UBERON:0000203!9.71e-11!25;UBERON:0000062!2.78e-10!511;UBERON:0002616!3.15e-10!59;UBERON:0002619!3.22e-10!22;UBERON:0000064!3.73e-10!219;UBERON:0001049!4.94e-10!57;UBERON:0005068!4.94e-10!57;UBERON:0006241!4.94e-10!57;UBERON:0007135!4.94e-10!57;UBERON:0001950!6.11e-10!20;UBERON:0002346!6.96e-10!90;UBERON:0000481!1.57e-09!347;UBERON:0001017!3.60e-09!82;UBERON:0005743!7.32e-09!86;UBERON:0006554!7.74e-09!44;UBERON:0001008!1.70e-08!45;UBERON:0000200!2.58e-08!6;UBERON:0000073!3.14e-08!94;UBERON:0001016!3.14e-08!94;UBERON:0000922!8.86e-08!612;UBERON:0000923!1.44e-07!604;UBERON:0005291!1.44e-07!604;UBERON:0006598!1.44e-07!604;UBERON:0002532!1.44e-07!604;UBERON:0002050!1.70e-07!605;UBERON:0005423!1.70e-07!605;UBERON:0000467!4.08e-07!625;UBERON:0000480!4.78e-07!626;UBERON:0000369!6.69e-07!4;UBERON:0002435!6.69e-07!4;UBERON:0000204!6.69e-07!4;UBERON:0010082!6.69e-07!4 | |ontology_enrichment_uberon=UBERON:0001869!1.23e-14!32;UBERON:0001893!1.73e-14!34;UBERON:0002020!1.89e-14!34;UBERON:0003528!1.89e-14!34;UBERON:0000033!5.09e-14!123;UBERON:0004121!1.29e-13!169;UBERON:0002791!1.72e-13!33;UBERON:0002780!2.14e-13!41;UBERON:0001890!2.14e-13!41;UBERON:0006240!2.14e-13!41;UBERON:0003056!2.64e-13!61;UBERON:0003080!6.84e-13!42;UBERON:0000924!7.07e-13!173;UBERON:0006601!7.07e-13!173;UBERON:0000475!1.14e-12!365;UBERON:0000153!1.19e-12!129;UBERON:0007811!1.19e-12!129;UBERON:0000119!3.12e-11!312;UBERON:0000483!3.69e-11!309;UBERON:0000955!6.47e-11!69;UBERON:0006238!6.47e-11!69;UBERON:0003075!7.53e-11!86;UBERON:0007284!7.53e-11!86;UBERON:0000956!9.71e-11!25;UBERON:0000203!9.71e-11!25;UBERON:0000062!2.78e-10!511;UBERON:0002616!3.15e-10!59;UBERON:0002619!3.22e-10!22;UBERON:0000064!3.73e-10!219;UBERON:0001049!4.94e-10!57;UBERON:0005068!4.94e-10!57;UBERON:0006241!4.94e-10!57;UBERON:0007135!4.94e-10!57;UBERON:0001950!6.11e-10!20;UBERON:0002346!6.96e-10!90;UBERON:0000481!1.57e-09!347;UBERON:0001017!3.60e-09!82;UBERON:0005743!7.32e-09!86;UBERON:0006554!7.74e-09!44;UBERON:0001008!1.70e-08!45;UBERON:0000200!2.58e-08!6;UBERON:0000073!3.14e-08!94;UBERON:0001016!3.14e-08!94;UBERON:0000922!8.86e-08!612;UBERON:0000923!1.44e-07!604;UBERON:0005291!1.44e-07!604;UBERON:0006598!1.44e-07!604;UBERON:0002532!1.44e-07!604;UBERON:0002050!1.70e-07!605;UBERON:0005423!1.70e-07!605;UBERON:0000467!4.08e-07!625;UBERON:0000480!4.78e-07!626;UBERON:0000369!6.69e-07!4;UBERON:0002435!6.69e-07!4;UBERON:0000204!6.69e-07!4;UBERON:0010082!6.69e-07!4 | ||
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|short_description=p2@SH2D5 | |short_description=p2@SH2D5 | ||
}} | }} |
Latest revision as of 21:54, 24 September 2015
Short description: | p2@SH2D5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_SH2D5_5end |
Coexpression cluster: | NA |
Association with transcript: | -478bp_to_ENST00000517430_5end |
EntrezGene: | SH2D5 |
HGNC: | 28819 |
UniProt: | E5RGV2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
respiratory epithelial cell | 9.87e-17 | 13 |
bronchial epithelial cell | 1.16e-14 | 3 |
stratified squamous epithelial cell | 3.28e-13 | 6 |
keratin accumulating cell | 3.28e-13 | 6 |
stratified epithelial cell | 3.28e-13 | 6 |
keratinizing barrier epithelial cell | 3.28e-13 | 6 |
epithelial fate stem cell | 3.28e-13 | 6 |
stratified epithelial stem cell | 3.28e-13 | 6 |
surface ectodermal cell | 3.28e-13 | 6 |
epithelial cell of tracheobronchial tree | 7.56e-13 | 9 |
epidermal cell | 7.56e-13 | 9 |
epithelial cell of lower respiratory tract | 7.56e-13 | 9 |
general ecto-epithelial cell | 2.52e-11 | 14 |
endo-epithelial cell | 3.08e-11 | 42 |
sebum secreting cell | 1.21e-09 | 2 |
epithelial cell of sweat gland | 1.21e-09 | 2 |
epithelial cell of skin gland | 1.21e-09 | 2 |
acinar cell of sebaceous gland | 1.21e-09 | 2 |
keratinocyte | 1.93e-09 | 5 |
endodermal cell | 1.50e-07 | 58 |
gingival epithelial cell | 2.52e-07 | 3 |
duct epithelial cell | 3.33e-07 | 3 |
branched duct epithelial cell | 3.33e-07 | 3 |
tracheal epithelial cell | 3.33e-07 | 3 |
tracheoblast | 3.33e-07 | 3 |